RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 ZSCAN32Q9NX65 697 aa15.39■□□□□ 0.05
SSB-204ENST00000417292 CDH7Q9ULB5 785 aa15.39■□□□□ 0.05
SSB-204ENST00000417292 COL4A3BPQ9Y5P4 624 aa15.39■□□□□ 0.05
SSB-204ENST00000417292 SRGAP2CP0DJJ0 459 aa15.38■□□□□ 0.05
SSB-204ENST00000417292 ITGA4P13612 1032 aa15.38■□□□□ 0.05
SSB-204ENST00000417292 GNA11P29992 359 aa15.38■□□□□ 0.05
SSB-204ENST00000417292 SCNN1GP51170 649 aa15.38■□□□□ 0.05
SSB-204ENST00000417292 DHX32Q7L7V1 743 aaKnown RBP15.38■□□□□ 0.05
SSB-204ENST00000417292 RASEFQ8IZ41 740 aa15.38■□□□□ 0.05
SSB-204ENST00000417292 ZNF579Q8NAF0 562 aaKnown RBP15.38■□□□□ 0.05
SSB-204ENST00000417292 CCDC12Q8WUD4 166 aaPredicted RBP15.38■□□□□ 0.05
SSB-204ENST00000417292 PRPF31Q8WWY3 499 aaKnown RBP15.38■□□□□ 0.05
SSB-204ENST00000417292 FGF13Q92913 245 aa15.38■□□□□ 0.05
SSB-204ENST00000417292 MBOAT7Q96N66 472 aa15.38■□□□□ 0.05
SSB-204ENST00000417292 EIF2AQ9BY44 585 aaKnown RBP15.38■□□□□ 0.05
SSB-204ENST00000417292 UBN1Q9NPG3 1134 aa15.38■□□□□ 0.05
SSB-204ENST00000417292 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.38■□□□□ 0.05
SSB-204ENST00000417292 FNIP2Q9P278 1114 aa15.38■□□□□ 0.05
SSB-204ENST00000417292 USP18Q9UMW8 372 aa15.38■□□□□ 0.05
SSB-204ENST00000417292 HES2Q9Y543 173 aa15.38■□□□□ 0.05
SSB-204ENST00000417292 IPPQ9Y573 584 aa15.38■□□□□ 0.05
SSB-204ENST00000417292 ASPMQ8IZT6 3477 aa15.37■□□□□ 0.05
SSB-204ENST00000417292 USP11P51784 963 aa15.37■□□□□ 0.05
SSB-204ENST00000417292 NPEPPSP55786 919 aa15.37■□□□□ 0.05
SSB-204ENST00000417292 USP41Q3LFD5 358 aa15.37■□□□□ 0.05
SSB-204ENST00000417292 ADCK5Q3MIX3 580 aa15.37■□□□□ 0.05
SSB-204ENST00000417292 FUT10Q6P4F1 479 aa15.37■□□□□ 0.05
SSB-204ENST00000417292 SRGAP1Q7Z6B7 1085 aa15.37■□□□□ 0.05
SSB-204ENST00000417292 RABGGTAQ92696 567 aa15.37■□□□□ 0.05
SSB-204ENST00000417292 SECISBP2LQ93073 1101 aaKnown RBP15.37■□□□□ 0.05
SSB-204ENST00000417292 TMEM143Q96AN5 459 aa15.37■□□□□ 0.05
SSB-204ENST00000417292 CLDN23Q96B33 292 aa15.37■□□□□ 0.05
SSB-204ENST00000417292 TARSP26639 723 aaKnown RBP15.36■□□□□ 0.05
SSB-204ENST00000417292 RCAN1P53805 252 aa15.36■□□□□ 0.05
SSB-204ENST00000417292 LAMTOR4Q0VGL1 99 aa15.36■□□□□ 0.05
SSB-204ENST00000417292 FZD5Q13467 585 aa15.36■□□□□ 0.05
SSB-204ENST00000417292 ZBTB41Q5SVQ8 909 aa15.36■□□□□ 0.05
SSB-204ENST00000417292 PRSS55Q6UWB4 352 aaPredicted RBP15.36■□□□□ 0.05
SSB-204ENST00000417292 GPR65Q8IYL9 337 aa15.36■□□□□ 0.05
SSB-204ENST00000417292 CNNM3Q8NE01 707 aa15.36■□□□□ 0.05
SSB-204ENST00000417292 GSTCDQ8NEC7 633 aa15.36■□□□□ 0.05
SSB-204ENST00000417292 ITFG1Q8TB96 612 aa15.36■□□□□ 0.05
SSB-204ENST00000417292 KXD1Q9BQD3 176 aa15.36■□□□□ 0.05
SSB-204ENST00000417292 JPH2Q9BR39 696 aaPredicted RBP15.36■□□□□ 0.05
SSB-204ENST00000417292 COLEC11Q9BWP8 271 aa15.36■□□□□ 0.05
SSB-204ENST00000417292 PRMT8Q9NR22 394 aaPredicted RBP15.36■□□□□ 0.05
SSB-204ENST00000417292 FBXW11Q9UKB1 542 aa15.36■□□□□ 0.05
SSB-204ENST00000417292 TDRD15B5MCY1 1934 aaKnown RBP15.35■□□□□ 0.05
SSB-204ENST00000417292 SHISA7A6NL88 538 aa15.35■□□□□ 0.05
SSB-204ENST00000417292 PRPF3O43395 683 aaKnown RBP15.35■□□□□ 0.05
SSB-204ENST00000417292 TBC1D4O60343 1298 aa15.35■□□□□ 0.05
SSB-204ENST00000417292 TDP2O95551 362 aa15.35■□□□□ 0.05
SSB-204ENST00000417292 MAGEA9P43362 315 aa15.35■□□□□ 0.05
SSB-204ENST00000417292 PSMC5P62195 406 aa15.35■□□□□ 0.05
SSB-204ENST00000417292 Q4G0T1 1027 aa15.35■□□□□ 0.05
SSB-204ENST00000417292 RTP2Q5QGT7 225 aa15.35■□□□□ 0.05
SSB-204ENST00000417292 RSPO2Q6UXX9 243 aaPredicted RBP15.35■□□□□ 0.05
SSB-204ENST00000417292 MTSS1LQ765P7 747 aa15.35■□□□□ 0.05
SSB-204ENST00000417292 BICD2Q8TD16 824 aa15.35■□□□□ 0.05
SSB-204ENST00000417292 SLC7A3Q8WY07 619 aa15.35■□□□□ 0.05
SSB-204ENST00000417292 DHX33Q9H6R0 707 aaKnown RBP15.35■□□□□ 0.05
SSB-204ENST00000417292 BMP2KQ9NSY1 1161 aaPredicted RBP15.35■□□□□ 0.05
SSB-204ENST00000417292 WRAP73Q9P2S5 460 aaPredicted RBP15.35■□□□□ 0.05
SSB-204ENST00000417292 CACNG4Q9UBN1 327 aa15.35■□□□□ 0.05
SSB-204ENST00000417292 ADAM28Q9UKQ2 775 aa15.35■□□□□ 0.05
SSB-204ENST00000417292 NAP1L2Q9ULW6 460 aaPredicted RBP15.35■□□□□ 0.05
SSB-204ENST00000417292 ZZEF1O43149 2961 aa15.34■□□□□ 0.05
SSB-204ENST00000417292 EML1O00423 815 aa15.34■□□□□ 0.05
SSB-204ENST00000417292 TSPAN1O60635 241 aa15.34■□□□□ 0.05
SSB-204ENST00000417292 NR1I2O75469 434 aa15.34■□□□□ 0.05
SSB-204ENST00000417292 RPS9P46781 194 aaKnown RBP15.34■□□□□ 0.05
SSB-204ENST00000417292 PFKPQ01813 784 aa15.34■□□□□ 0.05
SSB-204ENST00000417292 RNF20Q5VTR2 975 aa15.34■□□□□ 0.05
SSB-204ENST00000417292 TPRG1Q6ZUI0 275 aa15.34■□□□□ 0.05
SSB-204ENST00000417292 RNF149Q8NC42 400 aa15.34■□□□□ 0.05
SSB-204ENST00000417292 ETNPPLQ8TBG4 499 aa15.34■□□□□ 0.05
SSB-204ENST00000417292 TBCKQ8TEA7 893 aa15.34■□□□□ 0.05
SSB-204ENST00000417292 PSPC1Q8WXF1 523 aaKnown RBP15.34■□□□□ 0.05
SSB-204ENST00000417292 CPB2Q96IY4 423 aa15.34■□□□□ 0.05
SSB-204ENST00000417292 CLSTN3Q9BQT9 956 aa15.34■□□□□ 0.05
SSB-204ENST00000417292 APOL6Q9BWW8 343 aa15.34■□□□□ 0.05
SSB-204ENST00000417292 VPS54Q9P1Q0 977 aa15.34■□□□□ 0.05
SSB-204ENST00000417292 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.34■□□□□ 0.05
SSB-204ENST00000417292 NOTCH4Q99466 2003 aa15.33■□□□□ 0.04
SSB-204ENST00000417292 SPEGQ15772 3267 aa15.33■□□□□ 0.04
SSB-204ENST00000417292 CYP3A7-CYP3A51PA0A087WV96 503 aa15.33■□□□□ 0.04
SSB-204ENST00000417292 CCDC196A0A1B0GTZ2 297 aa15.33■□□□□ 0.04
SSB-204ENST00000417292 CCL16O15467 120 aa15.33■□□□□ 0.04
SSB-204ENST00000417292 C8AP07357 584 aa15.33■□□□□ 0.04
SSB-204ENST00000417292 HNRNPA1P09651 372 aaKnown RBP eCLIP15.33■□□□□ 0.04
SSB-204ENST00000417292 TDGF1P13385 188 aa15.33■□□□□ 0.04
SSB-204ENST00000417292 CPA1P15085 419 aa15.33■□□□□ 0.04
SSB-204ENST00000417292 CYP3A7P24462 503 aa15.33■□□□□ 0.04
SSB-204ENST00000417292 CREMQ03060 361 aa15.33■□□□□ 0.04
SSB-204ENST00000417292 SPEM2Q0P670 501 aa15.33■□□□□ 0.04
SSB-204ENST00000417292 MTAPQ13126 283 aa15.33■□□□□ 0.04
SSB-204ENST00000417292 LPAL2Q16609 132 aa15.33■□□□□ 0.04
SSB-204ENST00000417292 PPM1JQ5JR12 505 aa15.33■□□□□ 0.04
SSB-204ENST00000417292 NPAS3Q8IXF0 933 aa15.33■□□□□ 0.04
SSB-204ENST00000417292 CEP170P1Q96L14 293 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms