RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 PRAMEF14Q5SWL7 426 aa5.03□□□□□ -1.6
HMGB1P11-201ENST00000413899 Q6ZSN1 163 aa5.03□□□□□ -1.6
HMGB1P11-201ENST00000413899 PDZD4Q76G19 769 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P11-201ENST00000413899 KRTAP1-3Q8IUG1 177 aa5.03□□□□□ -1.6
HMGB1P11-201ENST00000413899 TRMT2AQ8IZ69 625 aaKnown RBP5.03□□□□□ -1.6
HMGB1P11-201ENST00000413899 MIER2Q8N344 545 aa5.03□□□□□ -1.6
HMGB1P11-201ENST00000413899 OR5M3Q8NGP4 307 aa5.03□□□□□ -1.6
HMGB1P11-201ENST00000413899 Q8TCH9 128 aa5.03□□□□□ -1.6
HMGB1P11-201ENST00000413899 JPH3Q8WXH2 748 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P11-201ENST00000413899 WWC2-AS2Q96NR7 200 aa5.03□□□□□ -1.6
HMGB1P11-201ENST00000413899 CDC5LQ99459 802 aaKnown RBP5.03□□□□□ -1.6
HMGB1P11-201ENST00000413899 C7orf25Q9BPX7 421 aa5.03□□□□□ -1.6
HMGB1P11-201ENST00000413899 PDCD2LQ9BRP1 358 aa5.03□□□□□ -1.6
HMGB1P11-201ENST00000413899 MANSC1Q9H8J5 431 aa5.03□□□□□ -1.6
HMGB1P11-201ENST00000413899 KLHL42Q9P2K6 505 aa5.03□□□□□ -1.6
HMGB1P11-201ENST00000413899 NCDNQ9UBB6 729 aa5.03□□□□□ -1.6
HMGB1P11-201ENST00000413899 INTUQ9ULD6 942 aa5.03□□□□□ -1.6
HMGB1P11-201ENST00000413899 JAG2Q9Y219 1238 aa5.03□□□□□ -1.6
HMGB1P11-201ENST00000413899 ATRNL1Q5VV63 1379 aa5.03□□□□□ -1.6
HMGB1P11-201ENST00000413899 CCDC154A6NI56 674 aa5.02□□□□□ -1.61
HMGB1P11-201ENST00000413899 ADCY6O43306 1168 aa5.02□□□□□ -1.61
HMGB1P11-201ENST00000413899 HOXA3O43365 443 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P11-201ENST00000413899 SGTAO43765 313 aa5.02□□□□□ -1.61
HMGB1P11-201ENST00000413899 FOXD2O60548 495 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P11-201ENST00000413899 ZNF623O75123 536 aa5.02□□□□□ -1.61
HMGB1P11-201ENST00000413899 IL33O95760 270 aa5.02□□□□□ -1.61
HMGB1P11-201ENST00000413899 POU2F2P09086 479 aa5.02□□□□□ -1.61
HMGB1P11-201ENST00000413899 PF4V1P10720 104 aa5.02□□□□□ -1.61
HMGB1P11-201ENST00000413899 SYN1P17600 705 aa5.02□□□□□ -1.61
HMGB1P11-201ENST00000413899 MSX2P35548 267 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P11-201ENST00000413899 SP140Q13342 867 aa5.02□□□□□ -1.61
HMGB1P11-201ENST00000413899 ICAM4Q14773 271 aa5.02□□□□□ -1.61
HMGB1P11-201ENST00000413899 RRP12Q5JTH9 1297 aaKnown RBP5.02□□□□□ -1.61
HMGB1P11-201ENST00000413899 FKBP15Q5T1M5 1219 aa5.02□□□□□ -1.61
HMGB1P11-201ENST00000413899 MAMDC4Q6UXC1 1216 aa5.02□□□□□ -1.61
HMGB1P11-201ENST00000413899 MIGA2Q7L4E1 593 aa5.02□□□□□ -1.61
HMGB1P11-201ENST00000413899 DOK3Q7L591 496 aa5.02□□□□□ -1.61
HMGB1P11-201ENST00000413899 ZNF572Q7Z3I7 529 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P11-201ENST00000413899 APBB1IPQ7Z5R6 666 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P11-201ENST00000413899 PQLC1Q8N2U9 271 aa5.02□□□□□ -1.61
HMGB1P11-201ENST00000413899 CASKIN2Q8WXE0 1202 aa5.02□□□□□ -1.61
HMGB1P11-201ENST00000413899 DPF2Q92785 391 aa5.02□□□□□ -1.61
HMGB1P11-201ENST00000413899 ARL8AQ96BM9 186 aa5.02□□□□□ -1.61
HMGB1P11-201ENST00000413899 ZNF512Q96ME7 567 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P11-201ENST00000413899 LANCL2Q9NS86 450 aa5.02□□□□□ -1.61
HMGB1P11-201ENST00000413899 TCEAL9Q9UHQ7 104 aa5.02□□□□□ -1.61
HMGB1P11-201ENST00000413899 G3BP2Q9UN86 482 aaKnown RBP5.02□□□□□ -1.61
HMGB1P11-201ENST00000413899 CFAP20Q9Y6A4 193 aaKnown RBP5.02□□□□□ -1.61
HMGB1P11-201ENST00000413899 TSPAN6O43657 245 aa5.01□□□□□ -1.61
HMGB1P11-201ENST00000413899 ALOX15P16050 662 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P11-201ENST00000413899 COMTP21964 271 aa5.01□□□□□ -1.61
HMGB1P11-201ENST00000413899 CYP2C19P33261 490 aa5.01□□□□□ -1.61
HMGB1P11-201ENST00000413899 FLT3LGP49771 235 aa5.01□□□□□ -1.61
HMGB1P11-201ENST00000413899 ATP8B2P98198 1209 aa5.01□□□□□ -1.61
HMGB1P11-201ENST00000413899 APBA1Q02410 837 aa5.01□□□□□ -1.61
HMGB1P11-201ENST00000413899 PLP2Q04941 152 aa5.01□□□□□ -1.61
HMGB1P11-201ENST00000413899 PPP2R5AQ15172 486 aa5.01□□□□□ -1.61
HMGB1P11-201ENST00000413899 UAP1L1Q3KQV9 507 aa5.01□□□□□ -1.61
HMGB1P11-201ENST00000413899 C3orf36Q3SXR2 165 aa5.01□□□□□ -1.61
HMGB1P11-201ENST00000413899 HS1BP3Q53T59 392 aa5.01□□□□□ -1.61
HMGB1P11-201ENST00000413899 FAM47AQ5JRC9 791 aa5.01□□□□□ -1.61
HMGB1P11-201ENST00000413899 METTL24Q5JXM2 366 aa5.01□□□□□ -1.61
HMGB1P11-201ENST00000413899 NXNQ6DKJ4 435 aa5.01□□□□□ -1.61
HMGB1P11-201ENST00000413899 CXorf57Q6NSI4 855 aaKnown RBP5.01□□□□□ -1.61
HMGB1P11-201ENST00000413899 LILRA6Q6PI73 481 aa5.01□□□□□ -1.61
HMGB1P11-201ENST00000413899 CHPFQ8IZ52 775 aa5.01□□□□□ -1.61
HMGB1P11-201ENST00000413899 PRR18Q8N4B5 295 aa5.01□□□□□ -1.61
HMGB1P11-201ENST00000413899 EDAQ92838 391 aa5.01□□□□□ -1.61
HMGB1P11-201ENST00000413899 TMEM176AQ96HP8 235 aa5.01□□□□□ -1.61
HMGB1P11-201ENST00000413899 AIFM3Q96NN9 605 aa5.01□□□□□ -1.61
HMGB1P11-201ENST00000413899 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P11-201ENST00000413899 SH3BP1Q9Y3L3 701 aa5.01□□□□□ -1.61
HMGB1P11-201ENST00000413899 B5MCH6 92 aa5□□□□□ -1.61
HMGB1P11-201ENST00000413899 STC2O76061 302 aa5□□□□□ -1.61
HMGB1P11-201ENST00000413899 SCGB1D2O95969 90 aa5□□□□□ -1.61
HMGB1P11-201ENST00000413899 AMY1AP04745 511 aa5□□□□□ -1.61
HMGB1P11-201ENST00000413899 HMGB1P09429 215 aaKnown RBP5□□□□□ -1.61
HMGB1P11-201ENST00000413899 CT47B1P0C2W7 299 aaPredicted RBP5□□□□□ -1.61
HMGB1P11-201ENST00000413899 U2AF1L5P0DN76 240 aaPredicted RBP5□□□□□ -1.61
HMGB1P11-201ENST00000413899 IL2RBP14784 551 aa5□□□□□ -1.61
HMGB1P11-201ENST00000413899 PDCP20941 246 aa5□□□□□ -1.61
HMGB1P11-201ENST00000413899 SELENOPP49908 381 aa5□□□□□ -1.61
HMGB1P11-201ENST00000413899 PER3P56645 1201 aa5□□□□□ -1.61
HMGB1P11-201ENST00000413899 CDC42EP1Q00587 391 aa5□□□□□ -1.61
HMGB1P11-201ENST00000413899 U2AF1Q01081 240 aaKnown RBP eCLIP5□□□□□ -1.61
HMGB1P11-201ENST00000413899 EFEMP1Q12805 493 aa5□□□□□ -1.61
HMGB1P11-201ENST00000413899 GTF2H3Q13889 308 aa5□□□□□ -1.61
HMGB1P11-201ENST00000413899 FAM214AQ32MH5 1076 aa5□□□□□ -1.61
HMGB1P11-201ENST00000413899 ATAT1Q5SQI0 421 aa5□□□□□ -1.61
HMGB1P11-201ENST00000413899 MFSD14BQ5SR56 506 aa5□□□□□ -1.61
HMGB1P11-201ENST00000413899 FAM102BQ5T8I3 360 aa5□□□□□ -1.61
HMGB1P11-201ENST00000413899 PPP4R3AQ6IN85 833 aa5□□□□□ -1.61
HMGB1P11-201ENST00000413899 USP45Q70EL2 814 aa5□□□□□ -1.61
HMGB1P11-201ENST00000413899 GPRIN1Q7Z2K8 1008 aa5□□□□□ -1.61
HMGB1P11-201ENST00000413899 TCEAL8Q8IYN2 117 aa5□□□□□ -1.61
HMGB1P11-201ENST00000413899 ANKRD35Q8N283 1001 aa5□□□□□ -1.61
HMGB1P11-201ENST00000413899 D2HGDHQ8N465 521 aa5□□□□□ -1.61
HMGB1P11-201ENST00000413899 REPS2Q8NFH8 660 aa5□□□□□ -1.61
HMGB1P11-201ENST00000413899 MDGA1Q8NFP4 955 aa5□□□□□ -1.61
HMGB1P11-201ENST00000413899 MDM1Q8TC05 714 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms