RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 COG1Q8WTW3 980 aa3.34□□□□□ -1.87
RNU6-1140P-201ENST00000410517 FUBP3Q96I24 572 aaKnown RBP eCLIP3.34□□□□□ -1.87
RNU6-1140P-201ENST00000410517 CDH19Q9H159 772 aa3.34□□□□□ -1.87
RNU6-1140P-201ENST00000410517 OR10A5Q9H207 317 aa3.34□□□□□ -1.87
RNU6-1140P-201ENST00000410517 ZMAT4Q9H898 229 aa3.34□□□□□ -1.87
RNU6-1140P-201ENST00000410517 TCF7L1Q9HCS4 588 aa3.34□□□□□ -1.87
RNU6-1140P-201ENST00000410517 PRDM11Q9NQV5 511 aa3.34□□□□□ -1.87
RNU6-1140P-201ENST00000410517 ZIM2Q9NZV7 527 aa3.34□□□□□ -1.87
RNU6-1140P-201ENST00000410517 SAE1Q9UBE0 346 aaPredicted RBP3.34□□□□□ -1.87
RNU6-1140P-201ENST00000410517 ADAM29Q9UKF5 820 aa3.34□□□□□ -1.87
RNU6-1140P-201ENST00000410517 LUC7L2Q9Y383 392 aaKnown RBP3.34□□□□□ -1.87
RNU6-1140P-201ENST00000410517 PCDHB6Q9Y5E3 794 aa3.34□□□□□ -1.87
RNU6-1140P-201ENST00000410517 NUMBLQ9Y6R0 609 aa3.34□□□□□ -1.87
RNU6-1140P-201ENST00000410517 FHOD3Q2V2M9 1422 aa3.34□□□□□ -1.88
RNU6-1140P-201ENST00000410517 UHRF1BP1Q6BDS2 1440 aa3.34□□□□□ -1.88
RNU6-1140P-201ENST00000410517 DENND4BO75064 1496 aaPredicted RBP3.34□□□□□ -1.88
RNU6-1140P-201ENST00000410517 RAPGEF2Q9Y4G8 1499 aa3.34□□□□□ -1.88
RNU6-1140P-201ENST00000410517 H0Y858 1186 aa3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 GABRDO14764 452 aa3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 FOXN1O15353 648 aa3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 DAPK3O43293 454 aa3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 TGM5O43548 720 aa3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 TOM1O60784 492 aa3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 PHF2O75151 1096 aa3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 H2AFYO75367 372 aaKnown RBP3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 FSBPO95073 299 aa3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 ONECUT2O95948 504 aa3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 MT-CO1P00395 513 aa3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 LRG1P02750 347 aa3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 LTFP02788 710 aa3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 KRT18P05783 430 aaKnown RBP3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 ATF3P18847 181 aa3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 AKAP5P24588 427 aa3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 ADRA1BP35368 520 aa3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 MEOX1P50221 254 aa3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 MANFP55145 182 aaKnown RBP3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 SCAND1P57086 179 aa3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 PFKPQ01813 784 aa3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 MCL1Q07820 350 aa3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 HDAC1Q13547 482 aaPredicted RBP3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 GTF2H3Q13889 308 aa3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 NFE2Q16621 373 aaPredicted RBP3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 WDR72Q3MJ13 1102 aa3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 THEMIS2Q5TEJ8 643 aa3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 MIGA2Q7L4E1 593 aa3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 REXO1L1PQ8IX06 675 aa3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 TCEAL8Q8IYN2 117 aa3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 ULK2Q8IYT8 1036 aa3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 DTX3Q8N9I9 347 aa3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 STAG1Q8WVM7 1258 aa3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 LMBR1Q8WVP7 490 aa3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 CLEC4DQ8WXI8 215 aa3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 RTF1Q92541 710 aaKnown RBP3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 FATE1Q969F0 183 aa3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 GFM2Q969S9 779 aaKnown RBP3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 HOOK2Q96ED9 719 aa3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 AIFM3Q96NN9 605 aa3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 NOL10Q9BSC4 688 aaKnown RBP3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 FAM126AQ9BYI3 521 aaPredicted RBP3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 MSL2Q9HCI7 577 aa3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 NMRK2Q9NPI5 230 aa3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 SLC2A4RGQ9NR83 387 aa3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 CCM2LQ9NUG4 571 aaPredicted RBP3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 POLR3BQ9NW08 1133 aaPredicted RBP3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 H2AFY2Q9P0M6 372 aaPredicted RBP3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 VWA7Q9Y334 891 aa3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 GPR45Q9Y5Y3 372 aa3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 CNTLNQ9NXG0 1405 aa3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 DISP1Q96F81 1524 aa3.33□□□□□ -1.88
RNU6-1140P-201ENST00000410517 PROB1E7EW31 1015 aa3.32□□□□□ -1.88
RNU6-1140P-201ENST00000410517 NRP1O14786 923 aa3.32□□□□□ -1.88
RNU6-1140P-201ENST00000410517 TSPAN6O43657 245 aa3.32□□□□□ -1.88
RNU6-1140P-201ENST00000410517 OFD1O75665 1012 aa3.32□□□□□ -1.88
RNU6-1140P-201ENST00000410517 ZSCAN20P17040 1043 aaPredicted RBP3.32□□□□□ -1.88
RNU6-1140P-201ENST00000410517 PTX3P26022 381 aaPredicted RBP3.32□□□□□ -1.88
RNU6-1140P-201ENST00000410517 ACRV1P26436 265 aa3.32□□□□□ -1.88
RNU6-1140P-201ENST00000410517 ADKP55263 362 aaKnown RBP3.32□□□□□ -1.88
RNU6-1140P-201ENST00000410517 PPARAQ07869 468 aa3.32□□□□□ -1.88
RNU6-1140P-201ENST00000410517 OS9Q13438 667 aaPredicted RBP3.32□□□□□ -1.88
RNU6-1140P-201ENST00000410517 ZMAT1Q5H9K5 638 aa3.32□□□□□ -1.88
RNU6-1140P-201ENST00000410517 FAM102BQ5T8I3 360 aa3.32□□□□□ -1.88
RNU6-1140P-201ENST00000410517 LAIR1Q6GTX8 287 aa3.32□□□□□ -1.88
RNU6-1140P-201ENST00000410517 ESRP1Q6NXG1 681 aaKnown RBP3.32□□□□□ -1.88
RNU6-1140P-201ENST00000410517 CCDC62Q6P9F0 684 aa3.32□□□□□ -1.88
RNU6-1140P-201ENST00000410517 KLHDC10Q6PID8 442 aa3.32□□□□□ -1.88
RNU6-1140P-201ENST00000410517 Q6ZPA2 131 aa3.32□□□□□ -1.88
RNU6-1140P-201ENST00000410517 RTN4RL1Q86UN2 441 aaPredicted RBP3.32□□□□□ -1.88
RNU6-1140P-201ENST00000410517 TTC17Q96AE7 1141 aa3.32□□□□□ -1.88
RNU6-1140P-201ENST00000410517 HSPBAP1Q96EW2 488 aa3.32□□□□□ -1.88
RNU6-1140P-201ENST00000410517 FAM89AQ96GI7 184 aa3.32□□□□□ -1.88
RNU6-1140P-201ENST00000410517 FAXDC2Q96IV6 333 aa3.32□□□□□ -1.88
RNU6-1140P-201ENST00000410517 ORAI2Q96SN7 254 aa3.32□□□□□ -1.88
RNU6-1140P-201ENST00000410517 MYL10Q9BUA6 226 aa3.32□□□□□ -1.88
RNU6-1140P-201ENST00000410517 ADI1Q9BV57 179 aa3.32□□□□□ -1.88
RNU6-1140P-201ENST00000410517 ACE2Q9BYF1 805 aaPredicted RBP3.32□□□□□ -1.88
RNU6-1140P-201ENST00000410517 POFUT1Q9H488 388 aa3.32□□□□□ -1.88
RNU6-1140P-201ENST00000410517 TOPORSQ9NS56 1045 aaPredicted RBP3.32□□□□□ -1.88
RNU6-1140P-201ENST00000410517 UCKL1Q9NWZ5 548 aa3.32□□□□□ -1.88
RNU6-1140P-201ENST00000410517 ZFP69BQ9UJL9 534 aa3.32□□□□□ -1.88
RNU6-1140P-201ENST00000410517 SLC4A7Q9Y6M7 1214 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms