RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 FPR2P25090 351 aa6.13□□□□□ -1.43
CLK1-202ENST00000409403 PMLP29590 882 aa6.13□□□□□ -1.43
CLK1-202ENST00000409403 RDXP35241 583 aaKnown RBP6.13□□□□□ -1.43
CLK1-202ENST00000409403 SCNN1BP51168 640 aa6.13□□□□□ -1.43
CLK1-202ENST00000409403 MNAT1P51948 309 aa6.13□□□□□ -1.43
CLK1-202ENST00000409403 HK2P52789 917 aa6.13□□□□□ -1.43
CLK1-202ENST00000409403 SARNPP82979 210 aaKnown RBP6.13□□□□□ -1.43
CLK1-202ENST00000409403 U2AF1Q01081 240 aaKnown RBP eCLIP6.13□□□□□ -1.431e-7■■■□□ 17.6
CLK1-202ENST00000409403 TUBB2AQ13885 445 aa6.13□□□□□ -1.43
CLK1-202ENST00000409403 NEDD9Q14511 834 aa6.13□□□□□ -1.43
CLK1-202ENST00000409403 PKN2Q16513 984 aaKnown RBP6.13□□□□□ -1.43
CLK1-202ENST00000409403 GALNT18Q6P9A2 607 aa6.13□□□□□ -1.43
CLK1-202ENST00000409403 GBP6Q6ZN66 633 aa6.13□□□□□ -1.43
CLK1-202ENST00000409403 LUZP1Q86V48 1076 aa6.13□□□□□ -1.43
CLK1-202ENST00000409403 LZTR1Q8N653 840 aa6.13□□□□□ -1.43
CLK1-202ENST00000409403 RABGGTAQ92696 567 aa6.13□□□□□ -1.43
CLK1-202ENST00000409403 ERCC4Q92889 916 aaPredicted RBP6.13□□□□□ -1.43
CLK1-202ENST00000409403 USP7Q93009 1102 aa6.13□□□□□ -1.43
CLK1-202ENST00000409403 ASIC4Q96FT7 647 aa6.13□□□□□ -1.43
CLK1-202ENST00000409403 ZSCAN31Q96LW9 406 aaPredicted RBP6.13□□□□□ -1.43
CLK1-202ENST00000409403 MPHOSPH8Q99549 860 aa6.13□□□□□ -1.43
CLK1-202ENST00000409403 TUBB2BQ9BVA1 445 aa6.13□□□□□ -1.43
CLK1-202ENST00000409403 NAT10Q9H0A0 1025 aaKnown RBP6.13□□□□□ -1.43
CLK1-202ENST00000409403 OSBPL5Q9H0X9 879 aaPredicted RBP6.13□□□□□ -1.43
CLK1-202ENST00000409403 PAK6Q9NQU5 681 aaPredicted RBP6.13□□□□□ -1.43
CLK1-202ENST00000409403 PRDM7Q9NQW5 492 aa6.13□□□□□ -1.43
CLK1-202ENST00000409403 CATSPERZQ9NTU4 200 aa6.13□□□□□ -1.43
CLK1-202ENST00000409403 RWDD3Q9Y3V2 267 aa6.13□□□□□ -1.43
CLK1-202ENST00000409403 ARFGEF2Q9Y6D5 1785 aa6.12□□□□□ -1.43
CLK1-202ENST00000409403 ATXN2Q99700 1313 aaKnown RBP6.12□□□□□ -1.43
CLK1-202ENST00000409403 NRXN2Q9P2S2 1712 aa6.12□□□□□ -1.43
CLK1-202ENST00000409403 FITM1A5D6W6 292 aa6.12□□□□□ -1.43
CLK1-202ENST00000409403 TTC36A6NLP5 189 aa6.12□□□□□ -1.43
CLK1-202ENST00000409403 BECN2A8MW95 431 aa6.12□□□□□ -1.43
CLK1-202ENST00000409403 ALG1L2C9J202 215 aa6.12□□□□□ -1.43
CLK1-202ENST00000409403 C22orf46C9J442 243 aa6.12□□□□□ -1.43
CLK1-202ENST00000409403 BRINP1O60477 761 aa6.12□□□□□ -1.43
CLK1-202ENST00000409403 PPP1R11O60927 126 aaPredicted RBP6.12□□□□□ -1.43
CLK1-202ENST00000409403 ERLIN2O94905 339 aa6.12□□□□□ -1.43
CLK1-202ENST00000409403 F2P00734 622 aa6.12□□□□□ -1.43
CLK1-202ENST00000409403 FUCA1P04066 466 aa6.12□□□□□ -1.43
CLK1-202ENST00000409403 NEFHP12036 1026 aa6.12□□□□□ -1.43
CLK1-202ENST00000409403 CCZ1BP86790 482 aa6.12□□□□□ -1.43
CLK1-202ENST00000409403 CCZ1P86791 482 aaPredicted RBP6.12□□□□□ -1.43
CLK1-202ENST00000409403 SART3Q15020 963 aaKnown RBP6.12□□□□□ -1.43
CLK1-202ENST00000409403 STX1AQ16623 288 aa6.12□□□□□ -1.43
CLK1-202ENST00000409403 FBXO46Q6PJ61 603 aaPredicted RBP6.12□□□□□ -1.43
CLK1-202ENST00000409403 NFXL1Q6ZNB6 911 aa6.12□□□□□ -1.43
CLK1-202ENST00000409403 OVCH1Q7RTY7 1134 aa6.12□□□□□ -1.43
CLK1-202ENST00000409403 FERMT3Q86UX7 667 aa6.12□□□□□ -1.43
CLK1-202ENST00000409403 ARHGEF25Q86VW2 580 aa6.12□□□□□ -1.43
CLK1-202ENST00000409403 NBPF5PQ86XG9 351 aaPredicted RBP6.12□□□□□ -1.43
CLK1-202ENST00000409403 SPATS2Q86XZ4 545 aaKnown RBP6.12□□□□□ -1.43
CLK1-202ENST00000409403 REXO1L1PQ8IX06 675 aa6.12□□□□□ -1.43
CLK1-202ENST00000409403 CHST14Q8NCH0 376 aa6.12□□□□□ -1.43
CLK1-202ENST00000409403 FAM71BQ8TC56 605 aa6.12□□□□□ -1.43
CLK1-202ENST00000409403 PI4K2BQ8TCG2 481 aa6.12□□□□□ -1.43
CLK1-202ENST00000409403 USP33Q8TEY7 942 aa6.12□□□□□ -1.43
CLK1-202ENST00000409403 GOLGA1Q92805 767 aa6.12□□□□□ -1.43
CLK1-202ENST00000409403 TSR2Q969E8 191 aaKnown RBP6.12□□□□□ -1.43
CLK1-202ENST00000409403 TTC1Q99614 292 aa6.12□□□□□ -1.43
CLK1-202ENST00000409403 MTA3Q9BTC8 594 aa6.12□□□□□ -1.43
CLK1-202ENST00000409403 JAM3Q9BX67 310 aa6.12□□□□□ -1.43
CLK1-202ENST00000409403 TERF2IPQ9NYB0 399 aa6.12□□□□□ -1.43
CLK1-202ENST00000409403 COA3Q9Y2R0 106 aaPredicted RBP6.12□□□□□ -1.43
CLK1-202ENST00000409403 X6R8D5 127 aa6.12□□□□□ -1.43
CLK1-202ENST00000409403 ADGRB1O14514 1584 aa6.12□□□□□ -1.43
CLK1-202ENST00000409403 PKD1L2Q7Z442 2459 aa6.12□□□□□ -1.43
CLK1-202ENST00000409403 ANKRD26Q9UPS8 1709 aa6.12□□□□□ -1.43
CLK1-202ENST00000409403 KRTAP4-8A0A0G2JLE6 195 aa6.11□□□□□ -1.43
CLK1-202ENST00000409403 CCDC189A1A4V9 331 aa6.11□□□□□ -1.43
CLK1-202ENST00000409403 KLHL33A6NCF5 533 aa6.11□□□□□ -1.43
CLK1-202ENST00000409403 A6NNZ2 444 aa6.11□□□□□ -1.43
CLK1-202ENST00000409403 ZSCAN12O43309 604 aa6.11□□□□□ -1.43
CLK1-202ENST00000409403 GAS7O60861 476 aa6.11□□□□□ -1.43
CLK1-202ENST00000409403 PDGFRBP09619 1106 aa6.11□□□□□ -1.43
CLK1-202ENST00000409403 GNAT1P11488 350 aa6.11□□□□□ -1.43
CLK1-202ENST00000409403 GYS1P13807 737 aa6.11□□□□□ -1.43
CLK1-202ENST00000409403 SFPQP23246 707 aaKnown RBP eCLIP6.11□□□□□ -1.43
CLK1-202ENST00000409403 TMPOP42166 694 aaKnown RBP6.11□□□□□ -1.43
CLK1-202ENST00000409403 EVCP57679 992 aa6.11□□□□□ -1.43
CLK1-202ENST00000409403 DDR1Q08345 913 aa6.11□□□□□ -1.43
CLK1-202ENST00000409403 SPIRE1Q08AE8 756 aa6.11□□□□□ -1.43
CLK1-202ENST00000409403 NOGQ13253 232 aa6.11□□□□□ -1.43
CLK1-202ENST00000409403 NR0B2Q15466 257 aa6.11□□□□□ -1.43
CLK1-202ENST00000409403 CRY1Q16526 586 aa6.11□□□□□ -1.43
CLK1-202ENST00000409403 TUBB8Q3ZCM7 444 aa6.11□□□□□ -1.43
CLK1-202ENST00000409403 CISD2Q8N5K1 135 aaKnown RBP6.11□□□□□ -1.43
CLK1-202ENST00000409403 ANKRD44Q8N8A2 993 aa6.11□□□□□ -1.43
CLK1-202ENST00000409403 WDR66Q8TBY9 1149 aa6.11□□□□□ -1.43
CLK1-202ENST00000409403 PLEKHO2Q8TD55 490 aa6.11□□□□□ -1.43
CLK1-202ENST00000409403 PPP1R13BQ96KQ4 1090 aa6.11□□□□□ -1.43
CLK1-202ENST00000409403 EPB41L1Q9H4G0 881 aa6.11□□□□□ -1.43
CLK1-202ENST00000409403 IFT22Q9H7X7 185 aa6.11□□□□□ -1.43
CLK1-202ENST00000409403 METTL14Q9HCE5 456 aaKnown RBP6.11□□□□□ -1.43
CLK1-202ENST00000409403 PDLIM7Q9NR12 457 aa6.11□□□□□ -1.43
CLK1-202ENST00000409403 GNL3LQ9NVN8 582 aaKnown RBP6.11□□□□□ -1.43
CLK1-202ENST00000409403 NRBP1Q9UHY1 535 aa6.11□□□□□ -1.43
CLK1-202ENST00000409403 HDAC9Q9UKV0 1011 aa6.11□□□□□ -1.43
CLK1-202ENST00000409403 CBLCQ9ULV8 474 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms