RNA–Protein interactions for RNA: ENST00000406477.7

PARVB-204, Transcript of parvin beta, humanhuman

TSL 1 (best) BASIC

Gene PARVB, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-204ENST00000406477 RAB20Q9NX57 234 aa17.53■□□□□ 0.4
PARVB-204ENST00000406477 PLXNB2O15031 1838 aa17.53■□□□□ 0.4
PARVB-204ENST00000406477 COL1A2P08123 1366 aa17.53■□□□□ 0.4
PARVB-204ENST00000406477 MANSC4A6NHS7 340 aaPredicted RBP17.53■□□□□ 0.4
PARVB-204ENST00000406477 MAGEB2O15479 319 aa17.53■□□□□ 0.4
PARVB-204ENST00000406477 RRP9O43818 475 aaKnown RBP17.53■□□□□ 0.4
PARVB-204ENST00000406477 SLC30A5Q8TAD4 765 aa17.53■□□□□ 0.4
PARVB-204ENST00000406477 CALR3Q96L12 384 aaKnown RBP17.53■□□□□ 0.4
PARVB-204ENST00000406477 MSTO1Q9BUK6 570 aa17.53■□□□□ 0.4
PARVB-204ENST00000406477 PDCL3Q9H2J4 239 aa17.53■□□□□ 0.4
PARVB-204ENST00000406477 SUGCTQ9HAC7 445 aa17.53■□□□□ 0.4
PARVB-204ENST00000406477 SNX12Q9UMY4 172 aa17.53■□□□□ 0.4
PARVB-204ENST00000406477 HYOU1Q9Y4L1 999 aa17.53■□□□□ 0.4
PARVB-204ENST00000406477 CAPN6Q9Y6Q1 641 aa17.53■□□□□ 0.4
PARVB-204ENST00000406477 SIP14410 1827 aa17.52■□□□□ 0.4
PARVB-204ENST00000406477 A0A0B4J269 797 aa17.52■□□□□ 0.39
PARVB-204ENST00000406477 FOXN3O00409 490 aaPredicted RBP17.52■□□□□ 0.39
PARVB-204ENST00000406477 DDX3XO00571 662 aaKnown RBP eCLIP17.52■□□□□ 0.394e-13■■■■□ 22.4
PARVB-204ENST00000406477 ENC1O14682 589 aa17.52■□□□□ 0.39
PARVB-204ENST00000406477 KLRC1P26715 233 aa17.52■□□□□ 0.39
PARVB-204ENST00000406477 AP3M2P53677 418 aa17.52■□□□□ 0.39
PARVB-204ENST00000406477 LAMTOR4Q0VGL1 99 aa17.52■□□□□ 0.39
PARVB-204ENST00000406477 SURF1Q15526 300 aa17.52■□□□□ 0.39
PARVB-204ENST00000406477 MAPK6Q16659 721 aa17.52■□□□□ 0.39
PARVB-204ENST00000406477 IQSEC1Q6DN90 963 aa17.52■□□□□ 0.39
PARVB-204ENST00000406477 SV2AQ7L0J3 742 aa17.52■□□□□ 0.39
PARVB-204ENST00000406477 TARS2Q9BW92 718 aaKnown RBP17.52■□□□□ 0.39
PARVB-204ENST00000406477 ABHD16BQ9H3Z7 469 aa17.52■□□□□ 0.39
PARVB-204ENST00000406477 SUCLA2Q9P2R7 463 aaPredicted RBP17.52■□□□□ 0.39
PARVB-204ENST00000406477 RNF14Q9UBS8 474 aa17.52■□□□□ 0.39
PARVB-204ENST00000406477 PUF60Q9UHX1 559 aaKnown RBP17.52■□□□□ 0.39
PARVB-204ENST00000406477 PCDHGC5Q9Y5F6 944 aa17.52■□□□□ 0.39
PARVB-204ENST00000406477 PLXNA1Q9UIW2 1896 aa17.51■□□□□ 0.39
PARVB-204ENST00000406477 ZBTB42B2RXF5 422 aa17.51■□□□□ 0.39
PARVB-204ENST00000406477 PPFIA4O75335 1185 aa17.51■□□□□ 0.39
PARVB-204ENST00000406477 TOM1L1O75674 476 aa17.51■□□□□ 0.39
PARVB-204ENST00000406477 DLATP10515 647 aaKnown RBP17.51■□□□□ 0.39
PARVB-204ENST00000406477 HUNKP57058 714 aa17.51■□□□□ 0.39
PARVB-204ENST00000406477 POU5F1BQ06416 359 aa17.51■□□□□ 0.39
PARVB-204ENST00000406477 GRM1Q13255 1194 aa17.51■□□□□ 0.39
PARVB-204ENST00000406477 TRIM50Q86XT4 487 aa17.51■□□□□ 0.39
PARVB-204ENST00000406477 ARHGEF19Q8IW93 802 aa17.51■□□□□ 0.39
PARVB-204ENST00000406477 U2AF1L4Q8WU68 220 aaKnown RBP17.51■□□□□ 0.39
PARVB-204ENST00000406477 MAML3Q96JK9 1138 aa17.51■□□□□ 0.39
PARVB-204ENST00000406477 AGPAT1Q99943 283 aa17.51■□□□□ 0.39
PARVB-204ENST00000406477 SYT11Q9BT88 431 aa17.51■□□□□ 0.39
PARVB-204ENST00000406477 CLDN3O15551 220 aa17.5■□□□□ 0.39
PARVB-204ENST00000406477 LGALS2P05162 132 aa17.5■□□□□ 0.39
PARVB-204ENST00000406477 PRKCBP05771 671 aa17.5■□□□□ 0.39
PARVB-204ENST00000406477 H2AFXP16104 143 aaPredicted RBP17.5■□□□□ 0.39
PARVB-204ENST00000406477 GCNT1Q02742 428 aa17.5■□□□□ 0.39
PARVB-204ENST00000406477 WDR44Q5JSH3 913 aa17.5■□□□□ 0.39
PARVB-204ENST00000406477 SMYD5Q6GMV2 418 aa17.5■□□□□ 0.39
PARVB-204ENST00000406477 CHADLQ6NUI6 762 aa17.5■□□□□ 0.39
PARVB-204ENST00000406477 C15orf39Q6ZRI6 1047 aa17.5■□□□□ 0.39
PARVB-204ENST00000406477 FAM71AQ8IYT1 594 aa17.5■□□□□ 0.39
PARVB-204ENST00000406477 PPM1KQ8N3J5 372 aa17.5■□□□□ 0.39
PARVB-204ENST00000406477 RNF149Q8NC42 400 aa17.5■□□□□ 0.39
PARVB-204ENST00000406477 PTPN18Q99952 460 aa17.5■□□□□ 0.39
PARVB-204ENST00000406477 KATNBL1Q9H079 304 aa17.5■□□□□ 0.39
PARVB-204ENST00000406477 CCDC113Q9H0I3 377 aa17.5■□□□□ 0.39
PARVB-204ENST00000406477 RBAKQ9NYW8 714 aaPredicted RBP17.5■□□□□ 0.39
PARVB-204ENST00000406477 ADGRA2Q96PE1 1338 aa17.5■□□□□ 0.39
PARVB-204ENST00000406477 BUB1O43683 1085 aa17.49■□□□□ 0.39
PARVB-204ENST00000406477 SNAI1O95863 264 aaPredicted RBP17.49■□□□□ 0.39
PARVB-204ENST00000406477 TMEM253P0C7T8 217 aa17.49■□□□□ 0.39
PARVB-204ENST00000406477 TNNI1P19237 187 aa17.49■□□□□ 0.39
PARVB-204ENST00000406477 ZACNQ401N2 412 aa17.49■□□□□ 0.39
PARVB-204ENST00000406477 DUSP28Q4G0W2 176 aa17.49■□□□□ 0.39
PARVB-204ENST00000406477 EFCAB12Q6NXP0 572 aa17.49■□□□□ 0.39
PARVB-204ENST00000406477 SYCE1Q8N0S2 351 aa17.49■□□□□ 0.39
PARVB-204ENST00000406477 LNX1Q8TBB1 728 aaPredicted RBP17.49■□□□□ 0.39
PARVB-204ENST00000406477 CAGE1Q8TC20 777 aa17.49■□□□□ 0.39
PARVB-204ENST00000406477 UBE2Q2Q8WVN8 375 aa17.49■□□□□ 0.39
PARVB-204ENST00000406477 SHC3Q92529 594 aa17.49■□□□□ 0.39
PARVB-204ENST00000406477 SEMA4DQ92854 862 aa17.49■□□□□ 0.39
PARVB-204ENST00000406477 CGRRF1Q99675 332 aa17.49■□□□□ 0.39
PARVB-204ENST00000406477 TINF2Q9BSI4 451 aa17.49■□□□□ 0.39
PARVB-204ENST00000406477 NFKBIZQ9BYH8 718 aa17.49■□□□□ 0.39
PARVB-204ENST00000406477 C1orf112Q9NSG2 853 aa17.49■□□□□ 0.39
PARVB-204ENST00000406477 HDAC6Q9UBN7 1215 aa17.49■□□□□ 0.39
PARVB-204ENST00000406477 SALL4Q9UJQ4 1053 aa17.49■□□□□ 0.39
PARVB-204ENST00000406477 MCM3APO60318 1980 aa17.49■□□□□ 0.39
PARVB-204ENST00000406477 MSCO60682 206 aa17.49■□□□□ 0.39
PARVB-204ENST00000406477 LRRN2O75325 713 aa17.49■□□□□ 0.39
PARVB-204ENST00000406477 PNMA6AP0CW24 399 aaPredicted RBP17.49■□□□□ 0.39
PARVB-204ENST00000406477 SRGAP2CP0DJJ0 459 aa17.49■□□□□ 0.39
PARVB-204ENST00000406477 TMOD1P28289 359 aa17.49■□□□□ 0.39
PARVB-204ENST00000406477 INHBEP58166 350 aa17.49■□□□□ 0.39
PARVB-204ENST00000406477 NLRP11P59045 1033 aaKnown RBP17.49■□□□□ 0.39
PARVB-204ENST00000406477 ITIH3Q06033 890 aa17.49■□□□□ 0.39
PARVB-204ENST00000406477 MKRN4PQ13434 485 aaPredicted RBP17.49■□□□□ 0.39
PARVB-204ENST00000406477 ACVR2BQ13705 512 aa17.49■□□□□ 0.39
PARVB-204ENST00000406477 CST9Q5W186 159 aa17.49■□□□□ 0.39
PARVB-204ENST00000406477 LRRC71Q8N4P6 559 aa17.49■□□□□ 0.39
PARVB-204ENST00000406477 HELQQ8TDG4 1101 aa17.49■□□□□ 0.39
PARVB-204ENST00000406477 TAS1R2Q8TE23 839 aa17.49■□□□□ 0.39
PARVB-204ENST00000406477 DHX38Q92620 1227 aaKnown RBP17.49■□□□□ 0.39
PARVB-204ENST00000406477 POP1Q99575 1024 aaKnown RBP17.49■□□□□ 0.39
PARVB-204ENST00000406477 ACO2Q99798 780 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms