RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 DEPTORQ8TB45 409 aa5.84□□□□□ -1.47
HMGB3P18-201ENST00000406327 MZB1Q8WU39 189 aa5.84□□□□□ -1.47
HMGB3P18-201ENST00000406327 LPPQ93052 612 aa5.84□□□□□ -1.47
HMGB3P18-201ENST00000406327 NKD2Q969F2 451 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P18-201ENST00000406327 ZSWIM3Q96MP5 696 aa5.84□□□□□ -1.47
HMGB3P18-201ENST00000406327 UHRF1Q96T88 793 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P18-201ENST00000406327 GORASP1Q9BQQ3 440 aa5.84□□□□□ -1.47
HMGB3P18-201ENST00000406327 EPB41L4BQ9H329 900 aa5.84□□□□□ -1.47
HMGB3P18-201ENST00000406327 WDCPQ9H6R7 721 aa5.84□□□□□ -1.47
HMGB3P18-201ENST00000406327 DCP1AQ9NPI6 582 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P18-201ENST00000406327 PADI4Q9UM07 663 aa5.84□□□□□ -1.47
HMGB3P18-201ENST00000406327 PCDHA5Q9Y5H7 936 aa5.84□□□□□ -1.47
HMGB3P18-201ENST00000406327 PCDHA13Q9Y5I0 950 aa5.84□□□□□ -1.47
HMGB3P18-201ENST00000406327 TEX51A0A1B0GUA7 166 aa5.83□□□□□ -1.48
HMGB3P18-201ENST00000406327 ABHD14A-ACY1A0A1B0GW23 586 aa5.83□□□□□ -1.48
HMGB3P18-201ENST00000406327 A0A1W2PPL8 197 aa5.83□□□□□ -1.48
HMGB3P18-201ENST00000406327 RHPN2P1A8MT19 583 aa5.83□□□□□ -1.48
HMGB3P18-201ENST00000406327 KNG1P01042 644 aa5.83□□□□□ -1.48
HMGB3P18-201ENST00000406327 GASTP01350 101 aa5.83□□□□□ -1.48
HMGB3P18-201ENST00000406327 HMGCRP04035 888 aa5.83□□□□□ -1.48
HMGB3P18-201ENST00000406327 GAAP10253 952 aa5.83□□□□□ -1.48
HMGB3P18-201ENST00000406327 POLD1P28340 1107 aa5.83□□□□□ -1.48
HMGB3P18-201ENST00000406327 SMARCA1P28370 1054 aa5.83□□□□□ -1.48
HMGB3P18-201ENST00000406327 MC3RP41968 323 aa5.83□□□□□ -1.48
HMGB3P18-201ENST00000406327 ETV4P43268 484 aa5.83□□□□□ -1.48
HMGB3P18-201ENST00000406327 MEOX1P50221 254 aa5.83□□□□□ -1.48
HMGB3P18-201ENST00000406327 ANTXR2P58335 489 aa5.83□□□□□ -1.48
HMGB3P18-201ENST00000406327 CD69Q07108 199 aa5.83□□□□□ -1.48
HMGB3P18-201ENST00000406327 CHAF1AQ13111 956 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P18-201ENST00000406327 FAM83BQ5T0W9 1011 aa5.83□□□□□ -1.48
HMGB3P18-201ENST00000406327 CBLL1Q75N03 491 aa5.83□□□□□ -1.48
HMGB3P18-201ENST00000406327 TAS1R1Q7RTX1 841 aa5.83□□□□□ -1.48
HMGB3P18-201ENST00000406327 RTKN2Q8IZC4 609 aa5.83□□□□□ -1.48
HMGB3P18-201ENST00000406327 LINC00482Q8N8I6 264 aa5.83□□□□□ -1.48
HMGB3P18-201ENST00000406327 OR7D4Q8NG98 312 aa5.83□□□□□ -1.48
HMGB3P18-201ENST00000406327 HOXB13Q92826 284 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P18-201ENST00000406327 SLC35A4Q96G79 324 aa5.83□□□□□ -1.48
HMGB3P18-201ENST00000406327 APIPQ96GX9 242 aa5.83□□□□□ -1.48
HMGB3P18-201ENST00000406327 CLPTM1LQ96KA5 538 aa5.83□□□□□ -1.48
HMGB3P18-201ENST00000406327 SAMD11Q96NU1 681 aa5.83□□□□□ -1.48
HMGB3P18-201ENST00000406327 C14orf93Q9H972 538 aaKnown RBP5.83□□□□□ -1.48
HMGB3P18-201ENST00000406327 LANCL2Q9NS86 450 aa5.83□□□□□ -1.48
HMGB3P18-201ENST00000406327 PCDHB1Q9Y5F3 818 aa5.83□□□□□ -1.48
HMGB3P18-201ENST00000406327 ISM1B1AKI9 464 aa5.82□□□□□ -1.48
HMGB3P18-201ENST00000406327 H3BUI4 141 aa5.82□□□□□ -1.48
HMGB3P18-201ENST00000406327 DDX3XO00571 662 aaKnown RBP eCLIP5.82□□□□□ -1.48
HMGB3P18-201ENST00000406327 TEX33O43247 280 aa5.82□□□□□ -1.48
HMGB3P18-201ENST00000406327 MYF5P13349 255 aa5.82□□□□□ -1.48
HMGB3P18-201ENST00000406327 ATF2P15336 505 aa5.82□□□□□ -1.48
HMGB3P18-201ENST00000406327 SERPINB3P29508 390 aa5.82□□□□□ -1.48
HMGB3P18-201ENST00000406327 CRHR1P34998 444 aa5.82□□□□□ -1.48
HMGB3P18-201ENST00000406327 FOXO4P98177 505 aa5.82□□□□□ -1.48
HMGB3P18-201ENST00000406327 SEPT2Q15019 361 aa5.82□□□□□ -1.48
HMGB3P18-201ENST00000406327 ANO1Q5XXA6 986 aa5.82□□□□□ -1.48
HMGB3P18-201ENST00000406327 XRRA1Q6P2D8 792 aa5.82□□□□□ -1.48
HMGB3P18-201ENST00000406327 TRMT10BQ6PF06 316 aaKnown RBP5.82□□□□□ -1.48
HMGB3P18-201ENST00000406327 HEATR3Q7Z4Q2 680 aa5.82□□□□□ -1.48
HMGB3P18-201ENST00000406327 REXO1L1PQ8IX06 675 aa5.82□□□□□ -1.48
HMGB3P18-201ENST00000406327 VPS37AQ8NEZ2 397 aa5.82□□□□□ -1.48
HMGB3P18-201ENST00000406327 OR2I1PQ8NGU4 316 aa5.82□□□□□ -1.48
HMGB3P18-201ENST00000406327 PHKBQ93100 1093 aa5.82□□□□□ -1.48
HMGB3P18-201ENST00000406327 SGCZQ96LD1 299 aa5.82□□□□□ -1.48
HMGB3P18-201ENST00000406327 HERPUD2Q9BSE4 406 aa5.82□□□□□ -1.48
HMGB3P18-201ENST00000406327 KRTAP4-5Q9BYR2 181 aa5.82□□□□□ -1.48
HMGB3P18-201ENST00000406327 CNTD2Q9H8S5 307 aa5.82□□□□□ -1.48
HMGB3P18-201ENST00000406327 KIAA1586Q9HCI6 787 aa5.82□□□□□ -1.48
HMGB3P18-201ENST00000406327 SARS2Q9NP81 518 aaKnown RBP5.82□□□□□ -1.48
HMGB3P18-201ENST00000406327 TMEM140Q9NV12 185 aa5.82□□□□□ -1.48
HMGB3P18-201ENST00000406327 GNL3LQ9NVN8 582 aaKnown RBP5.82□□□□□ -1.48
HMGB3P18-201ENST00000406327 MBD1Q9UIS9 605 aaPredicted RBP5.82□□□□□ -1.48
HMGB3P18-201ENST00000406327 PLA2G2DQ9UNK4 145 aa5.82□□□□□ -1.48
HMGB3P18-201ENST00000406327 LRCH1Q9Y2L9 728 aa5.82□□□□□ -1.48
HMGB3P18-201ENST00000406327 SNX13Q9Y5W8 968 aa5.82□□□□□ -1.48
HMGB3P18-201ENST00000406327 F5H423 210 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P18-201ENST00000406327 NRP1O14786 923 aa5.81□□□□□ -1.48
HMGB3P18-201ENST00000406327 N4BP3O15049 544 aa5.81□□□□□ -1.48
HMGB3P18-201ENST00000406327 GYPEP15421 78 aa5.81□□□□□ -1.48
HMGB3P18-201ENST00000406327 JUNBP17275 347 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P18-201ENST00000406327 IGFBP6P24592 240 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P18-201ENST00000406327 ADSLP30566 484 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P18-201ENST00000406327 KCNQ1P51787 676 aa5.81□□□□□ -1.48
HMGB3P18-201ENST00000406327 CDR1P51861 262 aa5.81□□□□□ -1.48
HMGB3P18-201ENST00000406327 NKX6-1P78426 367 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P18-201ENST00000406327 TOP3AQ13472 1001 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P18-201ENST00000406327 UBE3CQ15386 1083 aa5.81□□□□□ -1.48
HMGB3P18-201ENST00000406327 PDCD2Q16342 344 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P18-201ENST00000406327 INO80DQ53TQ3 878 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P18-201ENST00000406327 DGKKQ5KSL6 1271 aa5.81□□□□□ -1.48
HMGB3P18-201ENST00000406327 PHF19Q5T6S3 580 aa5.81□□□□□ -1.48
HMGB3P18-201ENST00000406327 APOA5Q6Q788 366 aa5.81□□□□□ -1.48
HMGB3P18-201ENST00000406327 PDZD4Q76G19 769 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P18-201ENST00000406327 BCL6BQ8N143 479 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P18-201ENST00000406327 PQLC1Q8N2U9 271 aa5.81□□□□□ -1.48
HMGB3P18-201ENST00000406327 OR2C3Q8N628 320 aa5.81□□□□□ -1.48
HMGB3P18-201ENST00000406327 BRIX1Q8TDN6 353 aaKnown RBP5.81□□□□□ -1.48
HMGB3P18-201ENST00000406327 FAM168AQ92567 244 aa5.81□□□□□ -1.48
HMGB3P18-201ENST00000406327 ZBTB8AQ96BR9 441 aa5.81□□□□□ -1.48
HMGB3P18-201ENST00000406327 SUCLG2Q96I99 432 aa5.81□□□□□ -1.48
HMGB3P18-201ENST00000406327 TMX3Q96JJ7 454 aa5.81□□□□□ -1.48
HMGB3P18-201ENST00000406327 TBCBQ99426 244 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms