RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 PDCP20941 246 aa6.43□□□□□ -1.38
HMGB3P19-201ENST00000403971 WASP42768 502 aa6.43□□□□□ -1.38
HMGB3P19-201ENST00000403971 SLC6A9P48067 706 aa6.43□□□□□ -1.38
HMGB3P19-201ENST00000403971 MST1LQ2TV78 715 aa6.43□□□□□ -1.38
HMGB3P19-201ENST00000403971 C19orf54Q5BKX5 351 aa6.43□□□□□ -1.38
HMGB3P19-201ENST00000403971 CXorf57Q6NSI4 855 aaKnown RBP6.43□□□□□ -1.38
HMGB3P19-201ENST00000403971 LGI4Q8N135 537 aa6.43□□□□□ -1.38
HMGB3P19-201ENST00000403971 REPS2Q8NFH8 660 aa6.43□□□□□ -1.38
HMGB3P19-201ENST00000403971 PAWRQ96IZ0 340 aaKnown RBP6.43□□□□□ -1.38
HMGB3P19-201ENST00000403971 KCNC2Q96PR1 638 aa6.43□□□□□ -1.38
HMGB3P19-201ENST00000403971 LRRC37BQ96QE4 947 aa6.43□□□□□ -1.38
HMGB3P19-201ENST00000403971 SLC12A5Q9H2X9 1139 aa6.43□□□□□ -1.38
HMGB3P19-201ENST00000403971 C12orf65Q9H3J6 166 aaKnown RBP6.43□□□□□ -1.38
HMGB3P19-201ENST00000403971 LDAHQ9H6V9 325 aa6.43□□□□□ -1.38
HMGB3P19-201ENST00000403971 OTOL1A6NHN0 477 aaPredicted RBP6.42□□□□□ -1.38
HMGB3P19-201ENST00000403971 WNT10BO00744 389 aa6.42□□□□□ -1.38
HMGB3P19-201ENST00000403971 MYBP10242 640 aa6.42□□□□□ -1.38
HMGB3P19-201ENST00000403971 VCAM1P19320 739 aa6.42□□□□□ -1.38
HMGB3P19-201ENST00000403971 AKAP5P24588 427 aa6.42□□□□□ -1.38
HMGB3P19-201ENST00000403971 ECHS1P30084 290 aa6.42□□□□□ -1.38
HMGB3P19-201ENST00000403971 CNR2P34972 360 aa6.42□□□□□ -1.38
HMGB3P19-201ENST00000403971 CASRP41180 1078 aa6.42□□□□□ -1.38
HMGB3P19-201ENST00000403971 ARHGEF18Q6ZSZ5 1173 aa6.42□□□□□ -1.38
HMGB3P19-201ENST00000403971 USP45Q70EL2 814 aa6.42□□□□□ -1.38
HMGB3P19-201ENST00000403971 RHOT1Q8IXI2 618 aa6.42□□□□□ -1.38
HMGB3P19-201ENST00000403971 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.42□□□□□ -1.38
HMGB3P19-201ENST00000403971 ZNF480Q8WV37 535 aa6.42□□□□□ -1.38
HMGB3P19-201ENST00000403971 NEIL1Q96FI4 390 aaPredicted RBP6.42□□□□□ -1.38
HMGB3P19-201ENST00000403971 AIFM3Q96NN9 605 aa6.42□□□□□ -1.38
HMGB3P19-201ENST00000403971 ADAM7Q9H2U9 754 aa6.42□□□□□ -1.38
HMGB3P19-201ENST00000403971 AGO3Q9H9G7 860 aaKnown RBP6.42□□□□□ -1.38
HMGB3P19-201ENST00000403971 GPRC5DQ9NZD1 345 aa6.42□□□□□ -1.38
HMGB3P19-201ENST00000403971 TRPS1Q9UHF7 1281 aa6.42□□□□□ -1.38
HMGB3P19-201ENST00000403971 PUF60Q9UHX1 559 aaKnown RBP6.42□□□□□ -1.38
HMGB3P19-201ENST00000403971 KIAA0556O60303 1618 aa6.42□□□□□ -1.38
HMGB3P19-201ENST00000403971 SLC26A4O43511 780 aa6.41□□□□□ -1.38
HMGB3P19-201ENST00000403971 PHF2O75151 1096 aa6.41□□□□□ -1.38
HMGB3P19-201ENST00000403971 ITGA10O75578 1167 aa6.41□□□□□ -1.38
HMGB3P19-201ENST00000403971 OFD1O75665 1012 aa6.41□□□□□ -1.38
HMGB3P19-201ENST00000403971 SASH1O94885 1247 aa6.41□□□□□ -1.38
HMGB3P19-201ENST00000403971 JUNP05412 331 aaKnown RBP6.41□□□□□ -1.38
HMGB3P19-201ENST00000403971 SREBF1P36956 1147 aa6.41□□□□□ -1.38
HMGB3P19-201ENST00000403971 RAC3P60763 192 aa6.41□□□□□ -1.38
HMGB3P19-201ENST00000403971 PPP2CBP62714 309 aa6.41□□□□□ -1.38
HMGB3P19-201ENST00000403971 PPP2CAP67775 309 aa6.41□□□□□ -1.38
HMGB3P19-201ENST00000403971 DUSP2Q05923 314 aa6.41□□□□□ -1.38
HMGB3P19-201ENST00000403971 RIN1Q13671 783 aa6.41□□□□□ -1.38
HMGB3P19-201ENST00000403971 GTF2H3Q13889 308 aa6.41□□□□□ -1.38
HMGB3P19-201ENST00000403971 HSP90AB2PQ58FF8 381 aa6.41□□□□□ -1.38
HMGB3P19-201ENST00000403971 B3GNT9Q6UX72 402 aa6.41□□□□□ -1.38
HMGB3P19-201ENST00000403971 MIGA2Q7L4E1 593 aa6.41□□□□□ -1.38
HMGB3P19-201ENST00000403971 ADGRE4PQ86SQ3 457 aa6.41□□□□□ -1.38
HMGB3P19-201ENST00000403971 GRAMD1CQ8IYS0 662 aa6.41□□□□□ -1.38
HMGB3P19-201ENST00000403971 GPR135Q8IZ08 494 aa6.41□□□□□ -1.38
HMGB3P19-201ENST00000403971 PRR18Q8N4B5 295 aa6.41□□□□□ -1.38
HMGB3P19-201ENST00000403971 RABGGTAQ92696 567 aa6.41□□□□□ -1.38
HMGB3P19-201ENST00000403971 HPS3Q969F9 1004 aa6.41□□□□□ -1.38
HMGB3P19-201ENST00000403971 HDAC10Q969S8 669 aa6.41□□□□□ -1.38
HMGB3P19-201ENST00000403971 C7orf25Q9BPX7 421 aa6.41□□□□□ -1.38
HMGB3P19-201ENST00000403971 PDCD2LQ9BRP1 358 aa6.41□□□□□ -1.38
HMGB3P19-201ENST00000403971 NMRK2Q9NPI5 230 aa6.41□□□□□ -1.38
HMGB3P19-201ENST00000403971 JADE2Q9NQC1 790 aa6.41□□□□□ -1.38
HMGB3P19-201ENST00000403971 OAZ3Q9UMX2 235 aa6.41□□□□□ -1.38
HMGB3P19-201ENST00000403971 DISP1Q96F81 1524 aa6.4□□□□□ -1.38
HMGB3P19-201ENST00000403971 FAM171A2A8MVW0 826 aa6.4□□□□□ -1.38
HMGB3P19-201ENST00000403971 VSTM5A8MXK1 200 aa6.4□□□□□ -1.38
HMGB3P19-201ENST00000403971 MTSS1O43312 755 aa6.4□□□□□ -1.38
HMGB3P19-201ENST00000403971 CDC14BO60729 498 aa6.4□□□□□ -1.38
HMGB3P19-201ENST00000403971 HSPA6P17066 643 aa6.4□□□□□ -1.38
HMGB3P19-201ENST00000403971 PER3P56645 1201 aa6.4□□□□□ -1.38
HMGB3P19-201ENST00000403971 WNT3AP56704 352 aa6.4□□□□□ -1.38
HMGB3P19-201ENST00000403971 GAGE13Q4V321 117 aa6.4□□□□□ -1.38
HMGB3P19-201ENST00000403971 ATAT1Q5SQI0 421 aa6.4□□□□□ -1.38
HMGB3P19-201ENST00000403971 FAM180AQ6UWF9 173 aa6.4□□□□□ -1.38
HMGB3P19-201ENST00000403971 PLEKHH3Q7Z736 793 aa6.4□□□□□ -1.38
HMGB3P19-201ENST00000403971 CMTM4Q8IZR5 234 aa6.4□□□□□ -1.38
HMGB3P19-201ENST00000403971 PQLC1Q8N2U9 271 aa6.4□□□□□ -1.38
HMGB3P19-201ENST00000403971 SHCBP1Q8NEM2 672 aa6.4□□□□□ -1.38
HMGB3P19-201ENST00000403971 OR7D4Q8NG98 312 aa6.4□□□□□ -1.38
HMGB3P19-201ENST00000403971 SLC35G2Q8TBE7 412 aa6.4□□□□□ -1.38
HMGB3P19-201ENST00000403971 MDM1Q8TC05 714 aa6.4□□□□□ -1.38
HMGB3P19-201ENST00000403971 CCHCR1Q8TD31 782 aa6.4□□□□□ -1.38
HMGB3P19-201ENST00000403971 STON2Q8WXE9 905 aa6.4□□□□□ -1.38
HMGB3P19-201ENST00000403971 MVB12AQ96EY5 273 aa6.4□□□□□ -1.38
HMGB3P19-201ENST00000403971 C8orf48Q96LL4 319 aa6.4□□□□□ -1.38
HMGB3P19-201ENST00000403971 GNRHR2Q96P88 292 aa6.4□□□□□ -1.38
HMGB3P19-201ENST00000403971 TAAR9Q96RI9 348 aa6.4□□□□□ -1.38
HMGB3P19-201ENST00000403971 LMF1Q96S06 567 aa6.4□□□□□ -1.38
HMGB3P19-201ENST00000403971 UHRF1Q96T88 793 aaPredicted RBP6.4□□□□□ -1.38
HMGB3P19-201ENST00000403971 XYLT2Q9H1B5 865 aa6.4□□□□□ -1.38
HMGB3P19-201ENST00000403971 MEGF9Q9H1U4 602 aa6.4□□□□□ -1.38
HMGB3P19-201ENST00000403971 ZCCHC4Q9H5U6 513 aa6.4□□□□□ -1.38
HMGB3P19-201ENST00000403971 RCAN3Q9UKA8 241 aa6.4□□□□□ -1.38
HMGB3P19-201ENST00000403971 PCDHB1Q9Y5F3 818 aa6.4□□□□□ -1.38
HMGB3P19-201ENST00000403971 ARAP1Q96P48 1450 aa6.4□□□□□ -1.39
HMGB3P19-201ENST00000403971 UBE2QL1A1L167 161 aa6.39□□□□□ -1.39
HMGB3P19-201ENST00000403971 LAMTOR5O43504 91 aa6.39□□□□□ -1.39
HMGB3P19-201ENST00000403971 STC2O76061 302 aa6.39□□□□□ -1.39
HMGB3P19-201ENST00000403971 ENDOD1O94919 500 aa6.39□□□□□ -1.39
HMGB3P19-201ENST00000403971 DSC2Q02487 901 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms