RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 ZBTB41Q5SVQ8 909 aa20.2■□□□□ 0.82
UFD1-202ENST00000399523 ANO5Q75V66 913 aa20.2■□□□□ 0.82
UFD1-202ENST00000399523 GJA10Q969M2 543 aa20.2■□□□□ 0.82
UFD1-202ENST00000399523 GAD1Q99259 594 aa20.2■□□□□ 0.82
UFD1-202ENST00000399523 NELL2Q99435 816 aa20.2■□□□□ 0.82
UFD1-202ENST00000399523 COLEC11Q9BWP8 271 aa20.2■□□□□ 0.82
UFD1-202ENST00000399523 FAM126AQ9BYI3 521 aaPredicted RBP20.2■□□□□ 0.82
UFD1-202ENST00000399523 GPR62Q9BZJ7 368 aa20.2■□□□□ 0.82
UFD1-202ENST00000399523 PRMT8Q9NR22 394 aaPredicted RBP20.2■□□□□ 0.82
UFD1-202ENST00000399523 NR1I2O75469 434 aa20.19■□□□□ 0.82
UFD1-202ENST00000399523 CREMQ03060 361 aa20.19■□□□□ 0.82
UFD1-202ENST00000399523 GRASPQ7Z6J2 395 aaPredicted RBP20.19■□□□□ 0.82
UFD1-202ENST00000399523 FGF13Q92913 245 aa20.19■□□□□ 0.82
UFD1-202ENST00000399523 RNF39Q9H2S5 420 aa20.19■□□□□ 0.82
UFD1-202ENST00000399523 MIOSQ9NXC5 875 aa20.19■□□□□ 0.82
UFD1-202ENST00000399523 IPPQ9Y573 584 aa20.19■□□□□ 0.82
UFD1-202ENST00000399523 HNRNPA1P09651 372 aaKnown RBP eCLIP20.18■□□□□ 0.822e-8■■□□□ 14.1
UFD1-202ENST00000399523 CD72P21854 359 aa20.18■□□□□ 0.82
UFD1-202ENST00000399523 ADD1P35611 737 aaKnown RBP20.18■□□□□ 0.82
UFD1-202ENST00000399523 MLH1P40692 756 aa20.18■□□□□ 0.82
UFD1-202ENST00000399523 FUT10Q6P4F1 479 aa20.18■□□□□ 0.82
UFD1-202ENST00000399523 TSSK4Q6SA08 328 aa20.18■□□□□ 0.82
UFD1-202ENST00000399523 GLYCTKQ8IVS8 523 aa20.18■□□□□ 0.82
UFD1-202ENST00000399523 BICD2Q8TD16 824 aa20.18■□□□□ 0.82
UFD1-202ENST00000399523 PRPF31Q8WWY3 499 aaKnown RBP20.18■□□□□ 0.82
UFD1-202ENST00000399523 TCEANC2Q96MN5 208 aa20.18■□□□□ 0.82
UFD1-202ENST00000399523 FBXW11Q9UKB1 542 aa20.18■□□□□ 0.82
UFD1-202ENST00000399523 GMEB2Q9UKD1 530 aa20.18■□□□□ 0.82
UFD1-202ENST00000399523 KLF18A0A0U1RQI7 1052 aa20.17■□□□□ 0.82
UFD1-202ENST00000399523 SLC30A4O14863 429 aa20.17■□□□□ 0.82
UFD1-202ENST00000399523 NCAM2O15394 837 aa20.17■□□□□ 0.82
UFD1-202ENST00000399523 SRGAP2CP0DJJ0 459 aa20.17■□□□□ 0.82
UFD1-202ENST00000399523 RPL17P18621 184 aaKnown RBP20.17■□□□□ 0.82
UFD1-202ENST00000399523 TARSP26639 723 aaKnown RBP20.17■□□□□ 0.82
UFD1-202ENST00000399523 SCNN1GP51170 649 aa20.17■□□□□ 0.82
UFD1-202ENST00000399523 NTHL1P78549 312 aa20.17■□□□□ 0.82
UFD1-202ENST00000399523 FZD5Q13467 585 aa20.17■□□□□ 0.82
UFD1-202ENST00000399523 Q4G0T1 1027 aa20.17■□□□□ 0.82
UFD1-202ENST00000399523 DHX32Q7L7V1 743 aaKnown RBP20.17■□□□□ 0.82
UFD1-202ENST00000399523 ZFP42Q96MM3 310 aa20.17■□□□□ 0.82
UFD1-202ENST00000399523 NOTCH4Q99466 2003 aa20.17■□□□□ 0.82
UFD1-202ENST00000399523 PSMC5P62195 406 aa20.16■□□□□ 0.82
UFD1-202ENST00000399523 PPM1JQ5JR12 505 aa20.16■□□□□ 0.82
UFD1-202ENST00000399523 PLA2G4FQ68DD2 849 aa20.16■□□□□ 0.82
UFD1-202ENST00000399523 NETO1Q8TDF5 533 aa20.16■□□□□ 0.82
UFD1-202ENST00000399523 PSPC1Q8WXF1 523 aaKnown RBP20.16■□□□□ 0.82
UFD1-202ENST00000399523 SLC7A3Q8WY07 619 aa20.16■□□□□ 0.82
UFD1-202ENST00000399523 EIF2AQ9BY44 585 aaKnown RBP20.16■□□□□ 0.82
UFD1-202ENST00000399523 ADAM28Q9UKQ2 775 aa20.16■□□□□ 0.82
UFD1-202ENST00000399523 CEP295Q9C0D2 2601 aa20.15■□□□□ 0.82
UFD1-202ENST00000399523 CCDC196A0A1B0GTZ2 297 aa20.15■□□□□ 0.82
UFD1-202ENST00000399523 PRPF3O43395 683 aaKnown RBP20.15■□□□□ 0.82
UFD1-202ENST00000399523 HOXA9P31269 272 aa20.15■□□□□ 0.82
UFD1-202ENST00000399523 LAMTOR4Q0VGL1 99 aa20.15■□□□□ 0.82
UFD1-202ENST00000399523 MAMSTRQ6ZN01 415 aa20.15■□□□□ 0.82
UFD1-202ENST00000399523 EXOC8Q8IYI6 725 aa20.15■□□□□ 0.82
UFD1-202ENST00000399523 GSTCDQ8NEC7 633 aa20.15■□□□□ 0.82
UFD1-202ENST00000399523 ITFG1Q8TB96 612 aa20.15■□□□□ 0.82
UFD1-202ENST00000399523 CCDC51Q96ER9 411 aa20.15■□□□□ 0.82
UFD1-202ENST00000399523 CHAMP1Q96JM3 812 aa20.15■□□□□ 0.82
UFD1-202ENST00000399523 ESYT1Q9BSJ8 1104 aa20.15■□□□□ 0.82
UFD1-202ENST00000399523 PHF20Q9BVI0 1012 aa20.15■□□□□ 0.82
UFD1-202ENST00000399523 DHX33Q9H6R0 707 aaKnown RBP20.15■□□□□ 0.82
UFD1-202ENST00000399523 HES2Q9Y543 173 aa20.15■□□□□ 0.82
UFD1-202ENST00000399523 CYP3A7-CYP3A51PA0A087WV96 503 aa20.14■□□□□ 0.81
UFD1-202ENST00000399523 LRP3O75074 770 aa20.14■□□□□ 0.81
UFD1-202ENST00000399523 POU2F2P09086 479 aa20.14■□□□□ 0.81
UFD1-202ENST00000399523 TDGF1P13385 188 aa20.14■□□□□ 0.81
UFD1-202ENST00000399523 CYP3A7P24462 503 aa20.14■□□□□ 0.81
UFD1-202ENST00000399523 AXLP30530 894 aa20.14■□□□□ 0.81
UFD1-202ENST00000399523 NPEPPSP55786 919 aa20.14■□□□□ 0.81
UFD1-202ENST00000399523 SPEM2Q0P670 501 aa20.14■□□□□ 0.81
UFD1-202ENST00000399523 MTAPQ13126 283 aa20.14■□□□□ 0.81
UFD1-202ENST00000399523 PCBP1Q15365 356 aaKnown RBP eCLIP20.14■□□□□ 0.81
UFD1-202ENST00000399523 LIN9Q5TKA1 542 aa20.14■□□□□ 0.81
UFD1-202ENST00000399523 PRSS55Q6UWB4 352 aaPredicted RBP20.14■□□□□ 0.81
UFD1-202ENST00000399523 TPRG1Q6ZUI0 275 aa20.14■□□□□ 0.81
UFD1-202ENST00000399523 TMEM143Q96AN5 459 aa20.14■□□□□ 0.81
UFD1-202ENST00000399523 KXD1Q9BQD3 176 aa20.14■□□□□ 0.81
UFD1-202ENST00000399523 GIT1Q9Y2X7 761 aa20.14■□□□□ 0.81
UFD1-202ENST00000399523 PPME1Q9Y570 386 aa20.14■□□□□ 0.81
UFD1-202ENST00000399523 SHISA7A6NL88 538 aa20.13■□□□□ 0.81
UFD1-202ENST00000399523 ASAP2O43150 1006 aa20.13■□□□□ 0.81
UFD1-202ENST00000399523 ERLIN2O94905 339 aa20.13■□□□□ 0.81
UFD1-202ENST00000399523 ADCY1Q08828 1119 aa20.13■□□□□ 0.81
UFD1-202ENST00000399523 RTP2Q5QGT7 225 aa20.13■□□□□ 0.81
UFD1-202ENST00000399523 PPM1LQ5SGD2 360 aa20.13■□□□□ 0.81
UFD1-202ENST00000399523 RNF20Q5VTR2 975 aa20.13■□□□□ 0.81
UFD1-202ENST00000399523 LAIR1Q6GTX8 287 aa20.13■□□□□ 0.81
UFD1-202ENST00000399523 ZNF852Q6ZMS4 543 aa20.13■□□□□ 0.81
UFD1-202ENST00000399523 CELF5Q8N6W0 485 aaKnown RBP20.13■□□□□ 0.81
UFD1-202ENST00000399523 ZNF579Q8NAF0 562 aaKnown RBP20.13■□□□□ 0.81
UFD1-202ENST00000399523 RNF149Q8NC42 400 aa20.13■□□□□ 0.81
UFD1-202ENST00000399523 CLSTN3Q9BQT9 956 aa20.13■□□□□ 0.81
UFD1-202ENST00000399523 RAB23Q9ULC3 237 aa20.13■□□□□ 0.81
UFD1-202ENST00000399523 KCNH3Q9ULD8 1083 aa20.13■□□□□ 0.81
UFD1-202ENST00000399523 MRPS17Q9Y2R5 130 aaKnown RBP20.13■□□□□ 0.81
UFD1-202ENST00000399523 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.13■□□□□ 0.81
UFD1-202ENST00000399523 RALGAPA1Q6GYQ0 2036 aa20.13■□□□□ 0.81
UFD1-202ENST00000399523 CCL16O15467 120 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms