RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 PSMD6Q15008 389 aa19.1■□□□□ 0.65
HLA-DQB1-204ENST00000399084 SLC39A4Q6P5W5 647 aa19.1■□□□□ 0.65
HLA-DQB1-204ENST00000399084 SND1Q7KZF4 910 aaKnown RBP eCLIP19.1■□□□□ 0.65
HLA-DQB1-204ENST00000399084 PPM1KQ8N3J5 372 aa19.1■□□□□ 0.65
HLA-DQB1-204ENST00000399084 EPS8L1Q8TE68 723 aa19.1■□□□□ 0.65
HLA-DQB1-204ENST00000399084 SH2D3AQ9BRG2 576 aa19.1■□□□□ 0.65
HLA-DQB1-204ENST00000399084 NOCTQ9UK39 431 aaKnown RBP19.1■□□□□ 0.65
HLA-DQB1-204ENST00000399084 PACSIN2Q9UNF0 486 aaPredicted RBP19.1■□□□□ 0.65
HLA-DQB1-204ENST00000399084 LRRN2O75325 713 aa19.09■□□□□ 0.65
HLA-DQB1-204ENST00000399084 ARL2P36404 184 aa19.09■□□□□ 0.65
HLA-DQB1-204ENST00000399084 LIG4P49917 911 aa19.09■□□□□ 0.65
HLA-DQB1-204ENST00000399084 CDR2Q01850 454 aa19.09■□□□□ 0.65
HLA-DQB1-204ENST00000399084 MAP2K1Q02750 393 aaPredicted RBP19.09■□□□□ 0.65
HLA-DQB1-204ENST00000399084 C15orf39Q6ZRI6 1047 aa19.09■□□□□ 0.65
HLA-DQB1-204ENST00000399084 SV2AQ7L0J3 742 aa19.09■□□□□ 0.65
HLA-DQB1-204ENST00000399084 RPUSD2Q8IZ73 545 aaKnown RBP19.09■□□□□ 0.65
HLA-DQB1-204ENST00000399084 UBL4BQ8N7F7 174 aa19.09■□□□□ 0.65
HLA-DQB1-204ENST00000399084 HELQQ8TDG4 1101 aa19.09■□□□□ 0.65
HLA-DQB1-204ENST00000399084 BICD1Q96G01 975 aa19.09■□□□□ 0.65
HLA-DQB1-204ENST00000399084 ZMYND15Q9H091 742 aa19.09■□□□□ 0.65
HLA-DQB1-204ENST00000399084 EPB41L5Q9HCM4 733 aa19.09■□□□□ 0.65
HLA-DQB1-204ENST00000399084 SEPT11Q9NVA2 429 aaKnown RBP19.09■□□□□ 0.65
HLA-DQB1-204ENST00000399084 VPS18Q9P253 973 aa19.09■□□□□ 0.65
HLA-DQB1-204ENST00000399084 UVRAGQ9P2Y5 699 aa19.09■□□□□ 0.65
HLA-DQB1-204ENST00000399084 ZC3H4Q9UPT8 1303 aaKnown RBP19.09■□□□□ 0.65
HLA-DQB1-204ENST00000399084 A0A0G2JMZ2 1700 aa19.09■□□□□ 0.65
HLA-DQB1-204ENST00000399084 WDR90Q96KV7 1748 aa19.09■□□□□ 0.65
HLA-DQB1-204ENST00000399084 MYH9P35579 1960 aaKnown RBP19.09■□□□□ 0.65
HLA-DQB1-204ENST00000399084 GOLGA8IPA6NC78 632 aa19.08■□□□□ 0.65
HLA-DQB1-204ENST00000399084 GOLGA8JA6NMD2 632 aa19.08■□□□□ 0.65
HLA-DQB1-204ENST00000399084 BHMG1C9JSJ3 638 aaPredicted RBP19.08■□□□□ 0.65
HLA-DQB1-204ENST00000399084 GOLGA8KD6RF30 607 aa19.08■□□□□ 0.65
HLA-DQB1-204ENST00000399084 KRIT1O00522 736 aa19.08■□□□□ 0.65
HLA-DQB1-204ENST00000399084 HSF2BPO75031 334 aa19.08■□□□□ 0.65
HLA-DQB1-204ENST00000399084 GGPS1O95749 300 aa19.08■□□□□ 0.65
HLA-DQB1-204ENST00000399084 SYF2O95926 243 aaKnown RBP19.08■□□□□ 0.65
HLA-DQB1-204ENST00000399084 GLI1P08151 1106 aa19.08■□□□□ 0.65
HLA-DQB1-204ENST00000399084 PDE6CP51160 858 aa19.08■□□□□ 0.65
HLA-DQB1-204ENST00000399084 AP3M2P53677 418 aa19.08■□□□□ 0.65
HLA-DQB1-204ENST00000399084 SLC7A5Q01650 507 aa19.08■□□□□ 0.65
HLA-DQB1-204ENST00000399084 PPFIA1Q13136 1202 aa19.08■□□□□ 0.65
HLA-DQB1-204ENST00000399084 ERO1BQ86YB8 467 aa19.08■□□□□ 0.65
HLA-DQB1-204ENST00000399084 C1orf131Q8NDD1 294 aaKnown RBP19.08■□□□□ 0.65
HLA-DQB1-204ENST00000399084 PSPC1Q8WXF1 523 aaKnown RBP19.08■□□□□ 0.65
HLA-DQB1-204ENST00000399084 CCDC127Q96BQ5 260 aa19.08■□□□□ 0.65
HLA-DQB1-204ENST00000399084 KREMEN1Q96MU8 473 aa19.08■□□□□ 0.65
HLA-DQB1-204ENST00000399084 SPATC1LQ9H0A9 340 aa19.08■□□□□ 0.65
HLA-DQB1-204ENST00000399084 THAP2Q9H0W7 228 aa19.08■□□□□ 0.65
HLA-DQB1-204ENST00000399084 TAF1DQ9H5J8 278 aaPredicted RBP19.08■□□□□ 0.65
HLA-DQB1-204ENST00000399084 EHD2Q9NZN4 543 aa19.08■□□□□ 0.65
HLA-DQB1-204ENST00000399084 NOC2LQ9Y3T9 749 aaKnown RBP19.08■□□□□ 0.65
HLA-DQB1-204ENST00000399084 A0A0G2JLL6 359 aaPredicted RBP19.08■□□□□ 0.64
HLA-DQB1-204ENST00000399084 GOLGA6L10A0A0M3HER8 536 aa19.08■□□□□ 0.64
HLA-DQB1-204ENST00000399084 K7ERI5 159 aa19.08■□□□□ 0.64
HLA-DQB1-204ENST00000399084 NF2P35240 595 aa19.08■□□□□ 0.64
HLA-DQB1-204ENST00000399084 EFNA5P52803 228 aa19.08■□□□□ 0.64
HLA-DQB1-204ENST00000399084 GUCY2DQ02846 1103 aa19.08■□□□□ 0.64
HLA-DQB1-204ENST00000399084 MTERF2Q49AM1 385 aa19.08■□□□□ 0.64
HLA-DQB1-204ENST00000399084 WDR44Q5JSH3 913 aa19.08■□□□□ 0.64
HLA-DQB1-204ENST00000399084 TAF3Q5VWG9 929 aa19.08■□□□□ 0.64
HLA-DQB1-204ENST00000399084 CYFIP1Q7L576 1253 aa19.08■□□□□ 0.64
HLA-DQB1-204ENST00000399084 PRRT2Q7Z6L0 340 aaPredicted RBP19.08■□□□□ 0.64
HLA-DQB1-204ENST00000399084 DEPTORQ8TB45 409 aa19.08■□□□□ 0.64
HLA-DQB1-204ENST00000399084 SEPT1Q8WYJ6 367 aa19.08■□□□□ 0.64
HLA-DQB1-204ENST00000399084 SAAL1Q96ER3 474 aa19.08■□□□□ 0.64
HLA-DQB1-204ENST00000399084 FNBP1Q96RU3 617 aa19.08■□□□□ 0.64
HLA-DQB1-204ENST00000399084 WNT8AQ9H1J5 351 aa19.08■□□□□ 0.64
HLA-DQB1-204ENST00000399084 SMARCAL1Q9NZC9 954 aa19.08■□□□□ 0.64
HLA-DQB1-204ENST00000399084 SART1O43290 800 aaKnown RBP19.07■□□□□ 0.64
HLA-DQB1-204ENST00000399084 ABCB4P21439 1286 aa19.07■□□□□ 0.64
HLA-DQB1-204ENST00000399084 IRX3P78415 501 aaPredicted RBP19.07■□□□□ 0.64
HLA-DQB1-204ENST00000399084 SP2Q02086 613 aa19.07■□□□□ 0.64
HLA-DQB1-204ENST00000399084 TARBP2Q15633 366 aaKnown RBP19.07■□□□□ 0.64
HLA-DQB1-204ENST00000399084 METTL7BQ6UX53 244 aa19.07■□□□□ 0.64
HLA-DQB1-204ENST00000399084 EFCAB13Q8IY85 973 aa19.07■□□□□ 0.64
HLA-DQB1-204ENST00000399084 ANKRD13AQ8IZ07 590 aa19.07■□□□□ 0.64
HLA-DQB1-204ENST00000399084 SEMA4DQ92854 862 aa19.07■□□□□ 0.64
HLA-DQB1-204ENST00000399084 TRIM11Q96F44 468 aa19.07■□□□□ 0.64
HLA-DQB1-204ENST00000399084 SH3GL2Q99962 352 aa19.07■□□□□ 0.64
HLA-DQB1-204ENST00000399084 OSGEPQ9NPF4 335 aa19.07■□□□□ 0.64
HLA-DQB1-204ENST00000399084 C1orf112Q9NSG2 853 aa19.07■□□□□ 0.64
HLA-DQB1-204ENST00000399084 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.07■□□□□ 0.64
HLA-DQB1-204ENST00000399084 CTTNBP2NLQ9P2B4 639 aa19.07■□□□□ 0.64
HLA-DQB1-204ENST00000399084 GTF3C4Q9UKN8 822 aa19.07■□□□□ 0.64
HLA-DQB1-204ENST00000399084 FAN1Q9Y2M0 1017 aa19.07■□□□□ 0.64
HLA-DQB1-204ENST00000399084 ADGRA3Q8IWK6 1321 aa19.07■□□□□ 0.64
HLA-DQB1-204ENST00000399084 DDX3YO15523 660 aaKnown RBP19.06■□□□□ 0.64
HLA-DQB1-204ENST00000399084 RNF40O75150 1001 aa19.06■□□□□ 0.64
HLA-DQB1-204ENST00000399084 CYP1A2P05177 515 aa19.06■□□□□ 0.64
HLA-DQB1-204ENST00000399084 CYP11B1P15538 503 aa19.06■□□□□ 0.64
HLA-DQB1-204ENST00000399084 ZACNQ401N2 412 aa19.06■□□□□ 0.64
HLA-DQB1-204ENST00000399084 ZPBP2Q6X784 338 aa19.06■□□□□ 0.64
HLA-DQB1-204ENST00000399084 TAS1R3Q7RTX0 852 aa19.06■□□□□ 0.64
HLA-DQB1-204ENST00000399084 NLGN2Q8NFZ4 835 aa19.06■□□□□ 0.64
HLA-DQB1-204ENST00000399084 ZC3H15Q8WU90 426 aaKnown RBP19.06■□□□□ 0.64
HLA-DQB1-204ENST00000399084 TCP11Q8WWU5 503 aa19.06■□□□□ 0.64
HLA-DQB1-204ENST00000399084 SEC14L1Q92503 715 aa19.06■□□□□ 0.64
HLA-DQB1-204ENST00000399084 RUNDC3BQ96NL0 473 aa19.06■□□□□ 0.64
HLA-DQB1-204ENST00000399084 RUFY1Q96T51 708 aa19.06■□□□□ 0.64
HLA-DQB1-204ENST00000399084 JPH2Q9BR39 696 aaPredicted RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms