RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 PGRMC1O00264 195 aaKnown RBP9.91□□□□□ -0.82
ATL3-201ENST00000398868 IPO5O00410 1097 aaKnown RBP9.91□□□□□ -0.82
ATL3-201ENST00000398868 DAB1O75553 588 aa9.91□□□□□ -0.82
ATL3-201ENST00000398868 MAP3K6O95382 1288 aa9.91□□□□□ -0.82
ATL3-201ENST00000398868 UBTFL6P0CB48 400 aaPredicted RBP9.91□□□□□ -0.82
ATL3-201ENST00000398868 ATP1A3P13637 1013 aa9.91□□□□□ -0.82
ATL3-201ENST00000398868 SRRM1Q8IYB3 904 aaKnown RBP9.91□□□□□ -0.82
ATL3-201ENST00000398868 CCNYL1Q8N7R7 359 aa9.91□□□□□ -0.82
ATL3-201ENST00000398868 ZNF512Q96ME7 567 aaPredicted RBP9.91□□□□□ -0.82
ATL3-201ENST00000398868 PBLDP30039 288 aaPredicted RBP9.9□□□□□ -0.82
ATL3-201ENST00000398868 QRICH1Q2TAL8 776 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 TRAF7Q6Q0C0 670 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 ACSF2Q96CM8 615 aaPredicted RBP9.9□□□□□ -0.82
ATL3-201ENST00000398868 SRPK1Q96SB4 655 aaKnown RBP9.9□□□□□ -0.82
ATL3-201ENST00000398868 PJA2O43164 708 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 EPB42P16452 691 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 GAP43P17677 238 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 THPOP40225 353 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 CENPAP49450 140 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 MRPL28Q13084 256 aaKnown RBP9.9□□□□□ -0.82
ATL3-201ENST00000398868 FAM102AQ5T9C2 384 aaPredicted RBP9.9□□□□□ -0.82
ATL3-201ENST00000398868 C9orf131Q5VYM1 1079 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 ELMSAN1Q6PJG2 1045 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 EPM2AIP1Q7L775 607 aaPredicted RBP9.9□□□□□ -0.82
ATL3-201ENST00000398868 CRLF3Q8IUI8 442 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 SLC25A41Q8N5S1 370 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 PYROXD1Q8WU10 500 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 ADAM22Q9P0K1 906 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 KLF15Q9UIH9 416 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 AOX1Q06278 1338 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 CEP170Q5SW79 1584 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 H0YC42 278 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 DIAPH2O60879 1101 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 C1orf131Q8NDD1 294 aaKnown RBP9.9□□□□□ -0.82
ATL3-201ENST00000398868 GCOM2Q9BZD3 368 aaPredicted RBP9.9□□□□□ -0.82
ATL3-201ENST00000398868 FOXP1Q9H334 677 aaPredicted RBP9.9□□□□□ -0.82
ATL3-201ENST00000398868 CNOT10Q9H9A5 744 aaKnown RBP9.9□□□□□ -0.82
ATL3-201ENST00000398868 SAYSD1Q9NPB0 183 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 ABCA5Q8WWZ7 1642 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 RNF103-CHMP3A0A140T963 221 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 IQCA1LA6NCM1 817 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 HSPA4LO95757 839 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 BTBD8Q5XKL5 378 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 ALS2CLQ60I27 953 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 RUNDC3BQ96NL0 473 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 RNF26Q9BY78 433 aaPredicted RBP9.9□□□□□ -0.82
ATL3-201ENST00000398868 ADNPQ9H2P0 1102 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 ETNK1Q9HBU6 452 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 ZFYVE28Q9HCC9 887 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 ATP8B1O43520 1251 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 TSC22D2O75157 780 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 CYP19A1P11511 503 aaPredicted RBP9.9□□□□□ -0.82
ATL3-201ENST00000398868 GYS1P13807 737 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 NMT1P30419 496 aaKnown RBP9.9□□□□□ -0.82
ATL3-201ENST00000398868 GNA15P30679 374 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 GUCY1A2P33402 732 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 TMED10P49755 219 aaKnown RBP9.9□□□□□ -0.82
ATL3-201ENST00000398868 AP2B1P63010 937 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 KIF23Q02241 960 aaPredicted RBP9.9□□□□□ -0.82
ATL3-201ENST00000398868 TMC4Q7Z404 712 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 LDHDQ86WU2 507 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 PPHLN1Q8NEY8 458 aaKnown RBP9.9□□□□□ -0.82
ATL3-201ENST00000398868 CPA5Q8WXQ8 436 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 UPF3AQ9H1J1 476 aaKnown RBP9.9□□□□□ -0.82
ATL3-201ENST00000398868 CD248Q9HCU0 757 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 COPRSQ9NQ92 184 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 TJP2Q9UDY2 1190 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 SATB2Q9UPW6 733 aa9.9□□□□□ -0.82
ATL3-201ENST00000398868 CCDC151A5D8V7 595 aa9.9□□□□□ -0.83
ATL3-201ENST00000398868 RASA4BC9J798 803 aa9.9□□□□□ -0.83
ATL3-201ENST00000398868 GOLGA8RI6L899 631 aa9.9□□□□□ -0.83
ATL3-201ENST00000398868 RASA4O43374 803 aa9.9□□□□□ -0.83
ATL3-201ENST00000398868 NLRP14Q86W24 1093 aa9.9□□□□□ -0.83
ATL3-201ENST00000398868 RASSF3Q86WH2 238 aa9.9□□□□□ -0.83
ATL3-201ENST00000398868 UBA3Q8TBC4 463 aa9.9□□□□□ -0.83
ATL3-201ENST00000398868 PRMT1Q99873 361 aaKnown RBP9.9□□□□□ -0.83
ATL3-201ENST00000398868 SNX24Q9Y343 169 aa9.9□□□□□ -0.83
ATL3-201ENST00000398868 SNX5Q9Y5X3 404 aa9.9□□□□□ -0.83
ATL3-201ENST00000398868 SCAMP3O14828 347 aaKnown RBP9.89□□□□□ -0.83
ATL3-201ENST00000398868 PQBP1O60828 265 aaKnown RBP9.89□□□□□ -0.83
ATL3-201ENST00000398868 LRRC31Q6UY01 552 aa9.89□□□□□ -0.83
ATL3-201ENST00000398868 MAP4K1Q92918 833 aa9.89□□□□□ -0.83
ATL3-201ENST00000398868 ABI2Q9NYB9 513 aaPredicted RBP9.89□□□□□ -0.83
ATL3-201ENST00000398868 RBAKQ9NYW8 714 aaPredicted RBP9.89□□□□□ -0.83
ATL3-201ENST00000398868 PAIP2BQ9ULR5 123 aaKnown RBP9.89□□□□□ -0.83
ATL3-201ENST00000398868 SNX9Q9Y5X1 595 aa9.89□□□□□ -0.83
ATL3-201ENST00000398868 HMGB1P1B2RPK0 211 aaPredicted RBP9.89□□□□□ -0.83
ATL3-201ENST00000398868 CDC27P30260 824 aa9.89□□□□□ -0.83
ATL3-201ENST00000398868 SGO1Q5FBB7 561 aa9.89□□□□□ -0.83
ATL3-201ENST00000398868 ALKBH2Q6NS38 261 aa9.89□□□□□ -0.83
ATL3-201ENST00000398868 B4GALNT2Q8NHY0 566 aa9.89□□□□□ -0.83
ATL3-201ENST00000398868 NEK9Q8TD19 979 aa9.89□□□□□ -0.83
ATL3-201ENST00000398868 DNAJC7Q99615 494 aa9.89□□□□□ -0.83
ATL3-201ENST00000398868 EIF2AK1Q9BQI3 630 aaKnown RBP9.89□□□□□ -0.83
ATL3-201ENST00000398868 ACAD9Q9H845 621 aa9.89□□□□□ -0.83
ATL3-201ENST00000398868 LINC00854A0A1B0GVQ3 168 aa9.89□□□□□ -0.83
ATL3-201ENST00000398868 GGPS1O95749 300 aa9.89□□□□□ -0.83
ATL3-201ENST00000398868 ATP6V1E1P36543 226 aa9.89□□□□□ -0.83
ATL3-201ENST00000398868 GALNT17Q6IS24 598 aa9.89□□□□□ -0.83
ATL3-201ENST00000398868 ANKMY2Q8IV38 441 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms