RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 PRR20CP86479 221 aa10.96□□□□□ -0.65
NIFKP1-201ENST00000398317 PRR20DP86480 221 aa10.96□□□□□ -0.65
NIFKP1-201ENST00000398317 PRR20BP86481 221 aa10.96□□□□□ -0.65
NIFKP1-201ENST00000398317 PRR20AP86496 221 aa10.96□□□□□ -0.65
NIFKP1-201ENST00000398317 RNASELQ05823 741 aaKnown RBP10.96□□□□□ -0.65
NIFKP1-201ENST00000398317 SIGLEC14Q08ET2 396 aa10.96□□□□□ -0.65
NIFKP1-201ENST00000398317 BMS1Q14692 1282 aaKnown RBP10.96□□□□□ -0.65
NIFKP1-201ENST00000398317 PTPN21Q16825 1174 aa10.96□□□□□ -0.65
NIFKP1-201ENST00000398317 EARS2Q5JPH6 523 aaKnown RBP10.96□□□□□ -0.65
NIFKP1-201ENST00000398317 RARS2Q5T160 578 aaKnown RBP10.96□□□□□ -0.65
NIFKP1-201ENST00000398317 GLB1LQ6UWU2 654 aa10.96□□□□□ -0.65
NIFKP1-201ENST00000398317 AGMOQ6ZNB7 445 aa10.96□□□□□ -0.65
NIFKP1-201ENST00000398317 ZBTB33Q86T24 672 aa10.96□□□□□ -0.65
NIFKP1-201ENST00000398317 SUGP1Q8IWZ8 645 aaKnown RBP10.96□□□□□ -0.65
NIFKP1-201ENST00000398317 FAM177A1Q8N128 213 aaPredicted RBP10.96□□□□□ -0.65
NIFKP1-201ENST00000398317 TMEM87AQ8NBN3 555 aa10.96□□□□□ -0.65
NIFKP1-201ENST00000398317 PRPF31Q8WWY3 499 aaKnown RBP10.96□□□□□ -0.65
NIFKP1-201ENST00000398317 HAS1Q92839 578 aa10.96□□□□□ -0.65
NIFKP1-201ENST00000398317 IGSF21Q96ID5 467 aa10.96□□□□□ -0.65
NIFKP1-201ENST00000398317 FAM20AQ96MK3 541 aa10.96□□□□□ -0.65
NIFKP1-201ENST00000398317 JPH2Q9BR39 696 aaPredicted RBP10.96□□□□□ -0.65
NIFKP1-201ENST00000398317 TRAIPQ9BWF2 469 aa10.96□□□□□ -0.65
NIFKP1-201ENST00000398317 POMKQ9H5K3 350 aa10.96□□□□□ -0.65
NIFKP1-201ENST00000398317 MINDY3Q9H8M7 445 aa10.96□□□□□ -0.65
NIFKP1-201ENST00000398317 DNAJB4Q9UDY4 337 aa10.96□□□□□ -0.65
NIFKP1-201ENST00000398317 PCDHB2Q9Y5E7 798 aa10.96□□□□□ -0.65
NIFKP1-201ENST00000398317 DMDP11532 3685 aa10.96□□□□□ -0.65
NIFKP1-201ENST00000398317 C2CD4DB7Z1M9 353 aa10.95□□□□□ -0.66
NIFKP1-201ENST00000398317 PFKFB2O60825 505 aa10.95□□□□□ -0.66
NIFKP1-201ENST00000398317 ZNF623O75123 536 aa10.95□□□□□ -0.66
NIFKP1-201ENST00000398317 CDKL5O76039 1030 aa10.95□□□□□ -0.66
NIFKP1-201ENST00000398317 CTDNEP1O95476 244 aa10.95□□□□□ -0.66
NIFKP1-201ENST00000398317 CTSAP10619 480 aa10.95□□□□□ -0.66
NIFKP1-201ENST00000398317 EPCAMP16422 314 aa10.95□□□□□ -0.66
NIFKP1-201ENST00000398317 SLC11A1P49279 550 aa10.95□□□□□ -0.66
NIFKP1-201ENST00000398317 AFF1P51825 1210 aaKnown RBP10.95□□□□□ -0.66
NIFKP1-201ENST00000398317 VCPP55072 806 aaKnown RBP10.95□□□□□ -0.66
NIFKP1-201ENST00000398317 CYP4A11Q02928 519 aa10.95□□□□□ -0.66
NIFKP1-201ENST00000398317 LAMTOR4Q0VGL1 99 aa10.95□□□□□ -0.66
NIFKP1-201ENST00000398317 CTTNQ14247 550 aaKnown RBP10.95□□□□□ -0.66
NIFKP1-201ENST00000398317 LAPTM4AQ15012 233 aa10.95□□□□□ -0.66
NIFKP1-201ENST00000398317 EPHA7Q15375 998 aa10.95□□□□□ -0.66
NIFKP1-201ENST00000398317 NCAPH2Q6IBW4 605 aa10.95□□□□□ -0.66
NIFKP1-201ENST00000398317 PPP4R3AQ6IN85 833 aa10.95□□□□□ -0.66
NIFKP1-201ENST00000398317 CES5AQ6NT32 575 aa10.95□□□□□ -0.66
NIFKP1-201ENST00000398317 DDX53Q86TM3 631 aaKnown RBP10.95□□□□□ -0.66
NIFKP1-201ENST00000398317 ZNF280BQ86YH2 543 aa10.95□□□□□ -0.66
NIFKP1-201ENST00000398317 FBXL6Q8N531 539 aa10.95□□□□□ -0.66
NIFKP1-201ENST00000398317 FEZF2Q8TBJ5 459 aa10.95□□□□□ -0.66
NIFKP1-201ENST00000398317 PSPC1Q8WXF1 523 aaKnown RBP10.95□□□□□ -0.66
NIFKP1-201ENST00000398317 SLC7A3Q8WY07 619 aa10.95□□□□□ -0.66
NIFKP1-201ENST00000398317 ASIC4Q96FT7 647 aa10.95□□□□□ -0.66
NIFKP1-201ENST00000398317 DYDC2Q96IM9 177 aa10.95□□□□□ -0.66
NIFKP1-201ENST00000398317 LXNQ9BS40 222 aa10.95□□□□□ -0.66
NIFKP1-201ENST00000398317 VN1R3Q9BXE9 311 aa10.95□□□□□ -0.66
NIFKP1-201ENST00000398317 ADAM7Q9H2U9 754 aa10.95□□□□□ -0.66
NIFKP1-201ENST00000398317 DHX33Q9H6R0 707 aaKnown RBP10.95□□□□□ -0.66
NIFKP1-201ENST00000398317 AGPAT5Q9NUQ2 364 aa10.95□□□□□ -0.66
NIFKP1-201ENST00000398317 ORC3Q9UBD5 711 aaPredicted RBP10.95□□□□□ -0.66
NIFKP1-201ENST00000398317 NR2E1Q9Y466 385 aa10.95□□□□□ -0.66
NIFKP1-201ENST00000398317 C2orf16Q68DN1 1984 aa10.95□□□□□ -0.66
NIFKP1-201ENST00000398317 TDRD15B5MCY1 1934 aaKnown RBP10.95□□□□□ -0.66
NIFKP1-201ENST00000398317 STK36Q9NRP7 1315 aa10.94□□□□□ -0.66
NIFKP1-201ENST00000398317 WNT7AO00755 349 aa10.94□□□□□ -0.66
NIFKP1-201ENST00000398317 DKC1O60832 514 aaKnown RBP eCLIP10.94□□□□□ -0.66
NIFKP1-201ENST00000398317 DDHD2O94830 711 aa10.94□□□□□ -0.66
NIFKP1-201ENST00000398317 PDGFBP01127 241 aaPredicted RBP10.94□□□□□ -0.66
NIFKP1-201ENST00000398317 SSBP05455 408 aaKnown RBP eCLIP10.94□□□□□ -0.66
NIFKP1-201ENST00000398317 GCFC2P16383 781 aaKnown RBP10.94□□□□□ -0.66
NIFKP1-201ENST00000398317 XBP1P17861 261 aa10.94□□□□□ -0.66
NIFKP1-201ENST00000398317 HOXA11P31270 313 aaPredicted RBP10.94□□□□□ -0.66
NIFKP1-201ENST00000398317 YWHABP31946 246 aaKnown RBP10.94□□□□□ -0.66
NIFKP1-201ENST00000398317 RFC5P40937 340 aa10.94□□□□□ -0.66
NIFKP1-201ENST00000398317 RAB27AP51159 221 aa10.94□□□□□ -0.66
NIFKP1-201ENST00000398317 ITIH3Q06033 890 aa10.94□□□□□ -0.66
NIFKP1-201ENST00000398317 NR5A1Q13285 461 aa10.94□□□□□ -0.66
NIFKP1-201ENST00000398317 EMC2Q15006 297 aa10.94□□□□□ -0.66
NIFKP1-201ENST00000398317 XKR9Q5GH70 373 aa10.94□□□□□ -0.66
NIFKP1-201ENST00000398317 UBXN11Q5T124 520 aa10.94□□□□□ -0.66
NIFKP1-201ENST00000398317 SRGAP1Q7Z6B7 1085 aa10.94□□□□□ -0.66
NIFKP1-201ENST00000398317 TPH2Q8IWU9 490 aa10.94□□□□□ -0.66
NIFKP1-201ENST00000398317 C4orf19Q8IY42 314 aa10.94□□□□□ -0.66
NIFKP1-201ENST00000398317 NECAB1Q8N987 351 aa10.94□□□□□ -0.66
NIFKP1-201ENST00000398317 RNF149Q8NC42 400 aa10.94□□□□□ -0.66
NIFKP1-201ENST00000398317 KREMEN2Q8NCW0 462 aa10.94□□□□□ -0.66
NIFKP1-201ENST00000398317 URGCPQ8TCY9 931 aa10.94□□□□□ -0.66
NIFKP1-201ENST00000398317 SLC22A17Q8WUG5 538 aa10.94□□□□□ -0.66
NIFKP1-201ENST00000398317 PGBD4Q96DM1 585 aa10.94□□□□□ -0.66
NIFKP1-201ENST00000398317 NECTIN4Q96NY8 510 aa10.94□□□□□ -0.66
NIFKP1-201ENST00000398317 SMOC2Q9H3U7 446 aa10.94□□□□□ -0.66
NIFKP1-201ENST00000398317 RSAD1Q9HA92 442 aa10.94□□□□□ -0.66
NIFKP1-201ENST00000398317 VPS13AQ96RL7 3174 aa10.94□□□□□ -0.66
NIFKP1-201ENST00000398317 CFAP54Q96N23 3096 aa10.93□□□□□ -0.66
NIFKP1-201ENST00000398317 ZFHX2Q9C0A1 2572 aaPredicted RBP10.93□□□□□ -0.66
NIFKP1-201ENST00000398317 TBX3O15119 743 aa10.93□□□□□ -0.66
NIFKP1-201ENST00000398317 POMCP01189 267 aa10.93□□□□□ -0.66
NIFKP1-201ENST00000398317 ASGR2P07307 311 aa10.93□□□□□ -0.66
NIFKP1-201ENST00000398317 MTHFRP42898 656 aa10.93□□□□□ -0.66
NIFKP1-201ENST00000398317 AK2P54819 239 aa10.93□□□□□ -0.66
NIFKP1-201ENST00000398317 SPIRE1Q08AE8 756 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms