RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 SIX2Q9NPC8 291 aa5.83□□□□□ -1.48
PTPRD-205ENST00000397611 FSCN2O14926 492 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 RNF8O76064 485 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 HNRNPCP07910 306 aaKnown RBP eCLIP5.82□□□□□ -1.48
PTPRD-205ENST00000397611 GTF2H1P32780 548 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 DR1Q01658 176 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 CUL3Q13618 768 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 TRIP13Q15645 432 aaPredicted RBP5.82□□□□□ -1.48
PTPRD-205ENST00000397611 WLSQ5T9L3 541 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 ZNF677Q86XU0 584 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 FUKQ8N0W3 1084 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 LINC00116Q8NCU8 138 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 DTNBP1Q96EV8 351 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 NUDCD1Q96RS6 583 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 ABCA3Q99758 1704 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 NUDT12Q9BQG2 462 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 WNT8AQ9H1J5 351 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 LRRC19Q9H756 370 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 DNAJC17Q9NVM6 304 aaKnown RBP5.82□□□□□ -1.48
PTPRD-205ENST00000397611 BIN2Q9UBW5 565 aaPredicted RBP5.82□□□□□ -1.48
PTPRD-205ENST00000397611 ATP5HO75947 161 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 PON1P27169 355 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 CBLBQ13191 982 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 EZH2Q15910 746 aaKnown RBP5.82□□□□□ -1.48
PTPRD-205ENST00000397611 SPDYE1Q8NFV5 336 aaPredicted RBP5.82□□□□□ -1.48
PTPRD-205ENST00000397611 SPECC1L-ADORA2AF8WAN1 911 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 TGFB1I1O43294 461 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 DNAJC8O75937 253 aaPredicted RBP5.82□□□□□ -1.48
PTPRD-205ENST00000397611 SNUPNO95149 360 aaKnown RBP5.82□□□□□ -1.48
PTPRD-205ENST00000397611 GFPT1Q06210 699 aaPredicted RBP5.82□□□□□ -1.48
PTPRD-205ENST00000397611 PREPLQ4J6C6 727 aaPredicted RBP5.82□□□□□ -1.48
PTPRD-205ENST00000397611 RGS9BPQ6ZS82 235 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 LONP2Q86WA8 852 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 MAB21L3Q8N8X9 362 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 SPIRE2Q8WWL2 714 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 XAB2Q9HCS7 855 aaKnown RBP5.82□□□□□ -1.48
PTPRD-205ENST00000397611 UBN1Q9NPG3 1134 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 THEGQ9P2T0 379 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 APEX2Q9UBZ4 518 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 FRMD4BQ9Y2L6 1034 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 MGRN1O60291 552 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 ABHD2P08910 425 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 RFC4P35249 363 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 ECM1Q16610 540 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 OLFML2BQ68BL8 750 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 C1orf186Q6ZWK4 172 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 FBXO11Q86XK2 927 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 SEC16BQ96JE7 1060 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 ZSWIM1Q9BR11 485 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 FETUBQ9UGM5 382 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 EFR3BQ9Y2G0 817 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 ZHX2Q9Y6X8 837 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 MAST2Q6P0Q8 1798 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 DNAJC6O75061 913 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 SPATA31C1P0DKV0 1188 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 ALAS1P13196 640 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 ITIH2P19823 946 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 MCL1Q07820 350 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 STRN3Q13033 797 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 LAMB3Q13751 1172 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 LRRC38Q5VT99 294 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 SFR1Q86XK3 245 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 SNRNP27Q8WVK2 155 aaKnown RBP5.82□□□□□ -1.48
PTPRD-205ENST00000397611 ARHGEF1Q92888 912 aaKnown RBP5.82□□□□□ -1.48
PTPRD-205ENST00000397611 CCDC97Q96F63 343 aaPredicted RBP5.82□□□□□ -1.48
PTPRD-205ENST00000397611 BHMT2Q9H2M3 363 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 KIAA1586Q9HCI6 787 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 ZDHHC18Q9NUE0 388 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 DBR1Q9UK59 544 aaKnown RBP5.82□□□□□ -1.48
PTPRD-205ENST00000397611 MEIS2O14770 477 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 SLC1A1P43005 524 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 PHEXP78562 749 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 PPP2R5CQ13362 524 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 TRPC3Q13507 836 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 SNX1Q13596 522 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 ZNF720Q7Z2F6 126 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 SMC1BQ8NDV3 1235 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 ZNF398Q8TD17 642 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 ZMAT2Q96NC0 199 aaKnown RBP5.82□□□□□ -1.48
PTPRD-205ENST00000397611 SERPINB12Q96P63 405 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 EXOC7Q9UPT5 735 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 AGTPBP1Q9UPW5 1226 aa5.82□□□□□ -1.48
PTPRD-205ENST00000397611 E9PMD0 336 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 ZBTB17Q13105 803 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 DRICH1Q6PGQ1 229 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-205ENST00000397611 JAMLQ86YT9 394 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 FAM178BQ8IXR5 827 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 PROCA1Q8NCQ7 364 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-205ENST00000397611 CCT6BQ92526 530 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 ZNF317Q96PQ6 595 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-205ENST00000397611 VAV3Q9UKW4 847 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 WDR91A4D1P6 747 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 MAFGO15525 162 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 GOLGA8HP0CJ92 632 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 KLRK1P26718 216 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 TMOD1P28289 359 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 IRX4P78413 519 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 DEUP1Q05D60 604 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 LRRC41Q15345 812 aa5.81□□□□□ -1.48
PTPRD-205ENST00000397611 ARSHQ5FYA8 562 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms