RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 C20orf96Q9NUD7 363 aaPredicted RBP13.02□□□□□ -0.33
SMU1-201ENST00000397149 NOS1P29475 1434 aa13.02□□□□□ -0.33
SMU1-201ENST00000397149 F8W810 466 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 VAMP4O75379 141 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 GSTM1P09488 218 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 CUL4AQ13619 759 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 ICE2Q659A1 982 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 P3H2Q8IVL5 708 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 FAM135AQ9P2D6 1515 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 TTLL1O95922 423 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 CDH2P19022 906 aaPredicted RBP13.01□□□□□ -0.33
SMU1-201ENST00000397149 TOMM20Q15388 145 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 FUT11Q495W5 492 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 OOSP2Q86WS3 158 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 MAGED4Q96JG8 741 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 POLG2Q9UHN1 485 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 PLA2G4BP0C869 781 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 ARHGEF25Q86VW2 580 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 C11orf70Q9BRQ4 267 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 FAM213AQ9BRX8 229 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.01□□□□□ -0.33
SMU1-201ENST00000397149 TSSK1BQ9BXA7 367 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 MARCOQ9UEW3 520 aaPredicted RBP13.01□□□□□ -0.33
SMU1-201ENST00000397149 ADAMTS1Q9UHI8 967 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 SURF1Q15526 300 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 USP17L2Q6R6M4 530 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 THTPAQ9BU02 230 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 PARD6BQ9BYG5 372 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 OSBPL6Q9BZF3 934 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 OLFML3Q9NRN5 406 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 PNMA6EA0A0J9YXQ4 647 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 GNAT1P11488 350 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 GPC3P51654 580 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 ROR1Q01973 937 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 ARHGEF7Q14155 803 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 EFHC2Q5JST6 749 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 TOGARAM2Q6ZUX3 1019 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 SPATA16Q9BXB7 569 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 RPRD1BQ9NQG5 326 aaKnown RBP13.01□□□□□ -0.33
SMU1-201ENST00000397149 GID8Q9NWU2 228 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 STON1Q9Y6Q2 735 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 TK2O00142 265 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 EIF2S1P05198 315 aaKnown RBP13.01□□□□□ -0.33
SMU1-201ENST00000397149 HPGDP15428 266 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 ARF4P18085 180 aaPredicted RBP13.01□□□□□ -0.33
SMU1-201ENST00000397149 DDX39BQ13838 428 aaKnown RBP13.01□□□□□ -0.33
SMU1-201ENST00000397149 BEST2Q8NFU1 509 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 OLFM3Q96PB7 478 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 FAM217BQ9NTX9 383 aaPredicted RBP13.01□□□□□ -0.33
SMU1-201ENST00000397149 RHBDL2Q9NX52 303 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 NCKAP5LQ9HCH0 1330 aa13.01□□□□□ -0.33
SMU1-201ENST00000397149 PPEF1O14829 653 aaPredicted RBP13□□□□□ -0.33
SMU1-201ENST00000397149 PALMO75781 387 aa13□□□□□ -0.33
SMU1-201ENST00000397149 DPYDQ12882 1025 aa13□□□□□ -0.33
SMU1-201ENST00000397149 OR8H2Q8N162 312 aa13□□□□□ -0.33
SMU1-201ENST00000397149 CEP95Q96GE4 821 aa13□□□□□ -0.33
SMU1-201ENST00000397149 MYLK2Q9H1R3 596 aa13□□□□□ -0.33
SMU1-201ENST00000397149 KLHL11Q9NVR0 708 aa13□□□□□ -0.33
SMU1-201ENST00000397149 PCDHA4Q9UN74 947 aa13□□□□□ -0.33
SMU1-201ENST00000397149 NFICP08651 508 aa13□□□□□ -0.33
SMU1-201ENST00000397149 BMP3P12645 472 aa13□□□□□ -0.33
SMU1-201ENST00000397149 IREB2P48200 963 aaKnown RBP13□□□□□ -0.33
SMU1-201ENST00000397149 SYDE2Q5VT97 1194 aa13□□□□□ -0.33
SMU1-201ENST00000397149 EME1Q96AY2 570 aa13□□□□□ -0.33
SMU1-201ENST00000397149 CLMNQ96JQ2 1002 aa13□□□□□ -0.33
SMU1-201ENST00000397149 LGR6Q9HBX8 967 aa13□□□□□ -0.33
SMU1-201ENST00000397149 ABCB6Q9NP58 842 aa13□□□□□ -0.33
SMU1-201ENST00000397149 RALAP11233 206 aa13□□□□□ -0.33
SMU1-201ENST00000397149 SDC4P31431 198 aa13□□□□□ -0.33
SMU1-201ENST00000397149 PGM1P36871 562 aa13□□□□□ -0.33
SMU1-201ENST00000397149 TWF1Q12792 350 aa13□□□□□ -0.33
SMU1-201ENST00000397149 HIC1Q14526 733 aa13□□□□□ -0.33
SMU1-201ENST00000397149 CYP26B1Q9NR63 512 aa13□□□□□ -0.33
SMU1-201ENST00000397149 SCN3BQ9NY72 215 aa13□□□□□ -0.33
SMU1-201ENST00000397149 ZFATQ9P243 1243 aa13□□□□□ -0.33
SMU1-201ENST00000397149 E9PBE3 544 aa13□□□□□ -0.33
SMU1-201ENST00000397149 CMA1P23946 247 aa13□□□□□ -0.33
SMU1-201ENST00000397149 DYNLL1P63167 89 aaKnown RBP13□□□□□ -0.33
SMU1-201ENST00000397149 FKBP3Q00688 224 aaKnown RBP13□□□□□ -0.33
SMU1-201ENST00000397149 SDE2Q6IQ49 451 aa13□□□□□ -0.33
SMU1-201ENST00000397149 ZNF746Q6NUN9 644 aaPredicted RBP13□□□□□ -0.33
SMU1-201ENST00000397149 SLC25A41Q8N5S1 370 aa13□□□□□ -0.33
SMU1-201ENST00000397149 IPCEF1Q8WWN9 437 aaPredicted RBP13□□□□□ -0.33
SMU1-201ENST00000397149 LMBRD1Q9NUN5 540 aa13□□□□□ -0.33
SMU1-201ENST00000397149 TBC1D23Q9NUY8 699 aa13□□□□□ -0.33
SMU1-201ENST00000397149 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13□□□□□ -0.33
SMU1-201ENST00000397149 WDR97A6NE52 1622 aa13□□□□□ -0.33
SMU1-201ENST00000397149 SYNCRIPO60506 623 aaKnown RBP13□□□□□ -0.33
SMU1-201ENST00000397149 POU1F1P28069 291 aa13□□□□□ -0.33
SMU1-201ENST00000397149 IMPAD1Q9NX62 359 aa13□□□□□ -0.33
SMU1-201ENST00000397149 SYBUQ9NX95 663 aa13□□□□□ -0.33
SMU1-201ENST00000397149 ATP1A1P05023 1023 aaKnown RBP13□□□□□ -0.33
SMU1-201ENST00000397149 ALOX15P16050 662 aaPredicted RBP13□□□□□ -0.33
SMU1-201ENST00000397149 EIF3BP55884 814 aaKnown RBP13□□□□□ -0.33
SMU1-201ENST00000397149 KLHL38Q2WGJ6 581 aa13□□□□□ -0.33
SMU1-201ENST00000397149 LRRC71Q8N4P6 559 aa13□□□□□ -0.33
SMU1-201ENST00000397149 HDHD2Q9H0R4 259 aa13□□□□□ -0.33
SMU1-201ENST00000397149 ATP6V1HQ9UI12 483 aa13□□□□□ -0.33
SMU1-201ENST00000397149 NDUFS3O75489 264 aa12.99□□□□□ -0.33
SMU1-201ENST00000397149 BRAFP15056 766 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms