RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 MRPL49Q13405 166 aaKnown RBP4.38□□□□□ -1.71
RNU6-39P-201ENST00000384344 ATP2B3Q16720 1220 aa4.38□□□□□ -1.71
RNU6-39P-201ENST00000384344 FAM83AQ86UY5 434 aa4.38□□□□□ -1.71
RNU6-39P-201ENST00000384344 ST8SIA2Q92186 375 aa4.38□□□□□ -1.71
RNU6-39P-201ENST00000384344 JADE3Q92613 823 aa4.38□□□□□ -1.71
RNU6-39P-201ENST00000384344 EDAQ92838 391 aa4.38□□□□□ -1.71
RNU6-39P-201ENST00000384344 HDAC10Q969S8 669 aa4.38□□□□□ -1.71
RNU6-39P-201ENST00000384344 CYFIP2Q96F07 1278 aa4.38□□□□□ -1.71
RNU6-39P-201ENST00000384344 TEKT5Q96M29 485 aa4.38□□□□□ -1.71
RNU6-39P-201ENST00000384344 SLC2A13Q96QE2 648 aa4.38□□□□□ -1.71
RNU6-39P-201ENST00000384344 GPR20Q99678 358 aa4.38□□□□□ -1.71
RNU6-39P-201ENST00000384344 CSRNP2Q9H175 543 aa4.38□□□□□ -1.71
RNU6-39P-201ENST00000384344 TMEM140Q9NV12 185 aa4.38□□□□□ -1.71
RNU6-39P-201ENST00000384344 AURKAIP1Q9NWT8 199 aaPredicted RBP4.38□□□□□ -1.71
RNU6-39P-201ENST00000384344 MOCS1Q9NZB8 636 aa4.38□□□□□ -1.71
RNU6-39P-201ENST00000384344 GIT1Q9Y2X7 761 aa4.38□□□□□ -1.71
RNU6-39P-201ENST00000384344 E2F8A0AVK6 867 aa4.37□□□□□ -1.71
RNU6-39P-201ENST00000384344 PRR5-ARHGAP8B1AHC4 643 aa4.37□□□□□ -1.71
RNU6-39P-201ENST00000384344 B5MCH6 92 aa4.37□□□□□ -1.71
RNU6-39P-201ENST00000384344 HOXA3O43365 443 aaPredicted RBP4.37□□□□□ -1.71
RNU6-39P-201ENST00000384344 ALDH1L1O75891 902 aa4.37□□□□□ -1.71
RNU6-39P-201ENST00000384344 IL2RBP14784 551 aa4.37□□□□□ -1.71
RNU6-39P-201ENST00000384344 ADKP55263 362 aaKnown RBP4.37□□□□□ -1.71
RNU6-39P-201ENST00000384344 KIF23Q02241 960 aaPredicted RBP4.37□□□□□ -1.71
RNU6-39P-201ENST00000384344 CNGB1Q14028 1251 aaPredicted RBP4.37□□□□□ -1.71
RNU6-39P-201ENST00000384344 PCBP2Q15366 365 aaKnown RBP eCLIP4.37□□□□□ -1.71
RNU6-39P-201ENST00000384344 UAP1L1Q3KQV9 507 aa4.37□□□□□ -1.71
RNU6-39P-201ENST00000384344 ODR4Q5SWX8 454 aa4.37□□□□□ -1.71
RNU6-39P-201ENST00000384344 PPP4R3AQ6IN85 833 aa4.37□□□□□ -1.71
RNU6-39P-201ENST00000384344 PQLC1Q8N2U9 271 aa4.37□□□□□ -1.71
RNU6-39P-201ENST00000384344 CPPED1Q9BRF8 314 aaPredicted RBP4.37□□□□□ -1.71
RNU6-39P-201ENST00000384344 PDCD2LQ9BRP1 358 aa4.37□□□□□ -1.71
RNU6-39P-201ENST00000384344 SENP6Q9GZR1 1112 aaPredicted RBP4.37□□□□□ -1.71
RNU6-39P-201ENST00000384344 CD248Q9HCU0 757 aa4.37□□□□□ -1.71
RNU6-39P-201ENST00000384344 DMRT3Q9NQL9 472 aa4.37□□□□□ -1.71
RNU6-39P-201ENST00000384344 SCOCQ9UIL1 159 aa4.37□□□□□ -1.71
RNU6-39P-201ENST00000384344 INTUQ9ULD6 942 aa4.37□□□□□ -1.71
RNU6-39P-201ENST00000384344 LUC7L2Q9Y383 392 aaKnown RBP4.37□□□□□ -1.71
RNU6-39P-201ENST00000384344 SH3BP1Q9Y3L3 701 aa4.37□□□□□ -1.71
RNU6-39P-201ENST00000384344 TNKSO95271 1327 aa4.37□□□□□ -1.71
RNU6-39P-201ENST00000384344 GOLGA6L6A8MZA4 724 aa4.36□□□□□ -1.71
RNU6-39P-201ENST00000384344 PRRG2O14669 202 aa4.36□□□□□ -1.71
RNU6-39P-201ENST00000384344 IL33O95760 270 aa4.36□□□□□ -1.71
RNU6-39P-201ENST00000384344 ADRB1P08588 477 aa4.36□□□□□ -1.71
RNU6-39P-201ENST00000384344 ZNF20P17024 532 aa4.36□□□□□ -1.71
RNU6-39P-201ENST00000384344 C5AR1P21730 350 aa4.36□□□□□ -1.71
RNU6-39P-201ENST00000384344 MGAT1P26572 445 aa4.36□□□□□ -1.71
RNU6-39P-201ENST00000384344 WASP42768 502 aa4.36□□□□□ -1.71
RNU6-39P-201ENST00000384344 MAN2A2P49641 1150 aa4.36□□□□□ -1.71
RNU6-39P-201ENST00000384344 FLT3LGP49771 235 aa4.36□□□□□ -1.71
RNU6-39P-201ENST00000384344 EPHB1P54762 984 aa4.36□□□□□ -1.71
RNU6-39P-201ENST00000384344 ADAM17P78536 824 aa4.36□□□□□ -1.71
RNU6-39P-201ENST00000384344 RRP12Q5JTH9 1297 aaKnown RBP4.36□□□□□ -1.71
RNU6-39P-201ENST00000384344 MAMDC4Q6UXC1 1216 aa4.36□□□□□ -1.71
RNU6-39P-201ENST00000384344 DOK3Q7L591 496 aa4.36□□□□□ -1.71
RNU6-39P-201ENST00000384344 RSPH3Q86UC2 560 aa4.36□□□□□ -1.71
RNU6-39P-201ENST00000384344 ZNF808Q8N4W9 903 aaPredicted RBP4.36□□□□□ -1.71
RNU6-39P-201ENST00000384344 MB21D1Q8N884 522 aa4.36□□□□□ -1.71
RNU6-39P-201ENST00000384344 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.36□□□□□ -1.71
RNU6-39P-201ENST00000384344 MDM1Q8TC05 714 aa4.36□□□□□ -1.71
RNU6-39P-201ENST00000384344 NRG4Q8WWG1 115 aa4.36□□□□□ -1.71
RNU6-39P-201ENST00000384344 TRPS1Q9UHF7 1281 aa4.36□□□□□ -1.71
RNU6-39P-201ENST00000384344 JAG2Q9Y219 1238 aa4.36□□□□□ -1.71
RNU6-39P-201ENST00000384344 TSC22D4Q9Y3Q8 395 aa4.36□□□□□ -1.71
RNU6-39P-201ENST00000384344 TESMINQ9Y4I5 508 aa4.36□□□□□ -1.71
RNU6-39P-201ENST00000384344 NCANO14594 1321 aa4.36□□□□□ -1.71
RNU6-39P-201ENST00000384344 FZD9O00144 591 aa4.35□□□□□ -1.71
RNU6-39P-201ENST00000384344 PCDHGA12O60330 932 aa4.35□□□□□ -1.71
RNU6-39P-201ENST00000384344 SNRPA1P09661 255 aaKnown RBP4.35□□□□□ -1.71
RNU6-39P-201ENST00000384344 PPP3CAQ08209 521 aa4.35□□□□□ -1.71
RNU6-39P-201ENST00000384344 SP140Q13342 867 aa4.35□□□□□ -1.71
RNU6-39P-201ENST00000384344 TTF1Q15361 905 aaPredicted RBP4.35□□□□□ -1.71
RNU6-39P-201ENST00000384344 FAM214AQ32MH5 1076 aa4.35□□□□□ -1.71
RNU6-39P-201ENST00000384344 DCAF17Q5H9S7 520 aaPredicted RBP4.35□□□□□ -1.71
RNU6-39P-201ENST00000384344 METTL24Q5JXM2 366 aa4.35□□□□□ -1.71
RNU6-39P-201ENST00000384344 TMEM240Q5SV17 173 aa4.35□□□□□ -1.71
RNU6-39P-201ENST00000384344 PRAMEF14Q5SWL7 426 aa4.35□□□□□ -1.71
RNU6-39P-201ENST00000384344 RHOT1Q8IXI2 618 aa4.35□□□□□ -1.71
RNU6-39P-201ENST00000384344 PALM2Q8IXS6 379 aa4.35□□□□□ -1.71
RNU6-39P-201ENST00000384344 ELOA2Q8IYF1 753 aaPredicted RBP4.35□□□□□ -1.71
RNU6-39P-201ENST00000384344 TRMT2AQ8IZ69 625 aaKnown RBP4.35□□□□□ -1.71
RNU6-39P-201ENST00000384344 MDGA1Q8NFP4 955 aa4.35□□□□□ -1.71
RNU6-39P-201ENST00000384344 ZFP28Q8NHY6 868 aa4.35□□□□□ -1.71
RNU6-39P-201ENST00000384344 STAG1Q8WVM7 1258 aa4.35□□□□□ -1.71
RNU6-39P-201ENST00000384344 ATXN2LQ8WWM7 1075 aaKnown RBP4.35□□□□□ -1.71
RNU6-39P-201ENST00000384344 FAM193BQ96PV7 902 aaPredicted RBP4.35□□□□□ -1.71
RNU6-39P-201ENST00000384344 C1QTNF3Q9BXJ4 246 aa4.35□□□□□ -1.71
RNU6-39P-201ENST00000384344 GPR87Q9BY21 358 aa4.35□□□□□ -1.71
RNU6-39P-201ENST00000384344 ENKD1Q9H0I2 346 aa4.35□□□□□ -1.71
RNU6-39P-201ENST00000384344 TDP1Q9NUW8 608 aa4.35□□□□□ -1.71
RNU6-39P-201ENST00000384344 TCEAL9Q9UHQ7 104 aa4.35□□□□□ -1.71
RNU6-39P-201ENST00000384344 PCDHGA9Q9Y5G4 932 aaKnown RBP4.35□□□□□ -1.71
RNU6-39P-201ENST00000384344 PCDHGA8Q9Y5G5 932 aa4.35□□□□□ -1.71
RNU6-39P-201ENST00000384344 PCDHGA7Q9Y5G6 932 aa4.35□□□□□ -1.71
RNU6-39P-201ENST00000384344 PCDHGA6Q9Y5G7 932 aa4.35□□□□□ -1.71
RNU6-39P-201ENST00000384344 PCDHGA3Q9Y5H0 932 aa4.35□□□□□ -1.71
RNU6-39P-201ENST00000384344 PJA2O43164 708 aa4.34□□□□□ -1.71
RNU6-39P-201ENST00000384344 GPR32O75388 356 aa4.34□□□□□ -1.71
RNU6-39P-201ENST00000384344 RECQL4O94761 1208 aa4.34□□□□□ -1.71
RNU6-39P-201ENST00000384344 ACRV1P26436 265 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms