RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 NOP9Q86U38 636 aaKnown RBP7.61□□□□□ -1.19
CCDC171-201ENST00000380701 CRLF3Q8IUI8 442 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 STAG2Q8N3U4 1231 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 BANK1Q8NDB2 785 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 ASPSCR1Q9BZE9 553 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 CATSPERBQ9H7T0 1116 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 PLEKHA5Q9HAU0 1116 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 SH3BP1Q9Y3L3 701 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 PITPNM2Q9BZ72 1349 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 GOLGA8IPA6NC78 632 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 CELF2O95319 508 aaKnown RBP7.61□□□□□ -1.19
CCDC171-201ENST00000380701 AKR1B1P15121 316 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 PSMA3P25788 255 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 U2AF2P26368 475 aaKnown RBP eCLIP7.61□□□□□ -1.19
CCDC171-201ENST00000380701 OAS2P29728 719 aaKnown RBP7.61□□□□□ -1.19
CCDC171-201ENST00000380701 ATP2C1P98194 919 aaPredicted RBP7.61□□□□□ -1.19
CCDC171-201ENST00000380701 RNF149Q8NC42 400 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 SPATA16Q9BXB7 569 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 EHD4Q9H223 541 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 FAM217BQ9NTX9 383 aaPredicted RBP7.61□□□□□ -1.19
CCDC171-201ENST00000380701 TEKT2Q9UIF3 430 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 PCDHGB4Q9UN71 923 aa7.61□□□□□ -1.19
CCDC171-201ENST00000380701 ZC3H4Q9UPT8 1303 aaKnown RBP7.6□□□□□ -1.19
CCDC171-201ENST00000380701 CYP2D7A0A087X1C5 515 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 GPR75-ASB3A0A0A6YYF3 556 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 HIST1H2AGP0C0S8 130 aaPredicted RBP7.6□□□□□ -1.19
CCDC171-201ENST00000380701 CYP2C9P11712 490 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 HIST1H2ADP20671 130 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 ALDH1A3P47895 512 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 KPNA1P52294 538 aaPredicted RBP7.6□□□□□ -1.19
CCDC171-201ENST00000380701 RPL10AP62906 217 aaKnown RBP7.6□□□□□ -1.19
CCDC171-201ENST00000380701 ART3Q13508 389 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 PPP6R3Q5H9R7 873 aaPredicted RBP7.6□□□□□ -1.19
CCDC171-201ENST00000380701 TRAPPC11Q7Z392 1133 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 PDZD8Q8NEN9 1154 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 HIST1H2AHQ96KK5 128 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 HIST1H2AJQ99878 128 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 H2AFJQ9BTM1 129 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 NR2E3Q9Y5X4 410 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 NRXN1Q9ULB1 1477 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 MFAP3LO75121 409 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 SPAG6O75602 509 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 NDUFB10O96000 172 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 CACNB3P54284 484 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 PLTPP55058 493 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 EFHC1Q5JVL4 640 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 USP17L6PQ6QN14 398 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 FBXO33Q7Z6M2 555 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 TBC1D10CQ8IV04 446 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 MGARPQ8TDB4 240 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 SOCS4Q8WXH5 440 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 TMEM169Q96HH4 297 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 GBP5Q96PP8 586 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 MOV10L1Q9BXT6 1211 aaKnown RBP7.6□□□□□ -1.19
CCDC171-201ENST00000380701 GDAQ9Y2T3 454 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 C17orf102A2RUQ5 167 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 PI4K2BG5E9Z4 385 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 COPEO14579 308 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 STRNO43815 780 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 SMIM24O75264 130 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 HSPA4LO95757 839 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 CLTAP09496 248 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 PLS3P13797 630 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 PDXDC1Q6P996 788 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 OSCP1Q8WVF1 389 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 YY1AP1Q9H869 796 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 KANSL3Q9P2N6 904 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 STX18Q9P2W9 335 aaKnown RBP7.6□□□□□ -1.19
CCDC171-201ENST00000380701 IGSF9BQ9UPX0 1349 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 PRRG1O14668 218 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 MSCO60682 206 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 DCTN3O75935 186 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 ABCE1P61221 599 aaKnown RBP7.6□□□□□ -1.19
CCDC171-201ENST00000380701 OCRLQ01968 901 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 ROR1Q01973 937 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 MED21Q13503 144 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 KRT31Q15323 416 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 IMPG1Q17R60 797 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 PBXIP1Q96AQ6 731 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 DESI2Q9BSY9 194 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 FRMD8P1Q9BZ68 369 aaPredicted RBP7.6□□□□□ -1.19
CCDC171-201ENST00000380701 GBA2Q9HCG7 927 aaPredicted RBP7.6□□□□□ -1.19
CCDC171-201ENST00000380701 PCDHB7Q9Y5E2 793 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 BNIP3LO60238 219 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 CABYRO75952 493 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 KCNQ4P56696 695 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 FKBP1AP62942 108 aaKnown RBP7.6□□□□□ -1.19
CCDC171-201ENST00000380701 CYP27A1Q02318 531 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 CACNB1Q02641 598 aaPredicted RBP7.6□□□□□ -1.19
CCDC171-201ENST00000380701 DHX9Q08211 1270 aaKnown RBP7.6□□□□□ -1.19
CCDC171-201ENST00000380701 BAATQ14032 418 aaPredicted RBP7.6□□□□□ -1.19
CCDC171-201ENST00000380701 SPARCL1Q14515 664 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 SLFNL1Q499Z3 407 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 SLC35F6Q8N357 371 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 DDX27Q96GQ7 796 aaKnown RBP7.6□□□□□ -1.19
CCDC171-201ENST00000380701 ZMYND12Q9H0C1 365 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 AXIN2Q9Y2T1 843 aa7.6□□□□□ -1.19
CCDC171-201ENST00000380701 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.6□□□□□ -1.19
CCDC171-201ENST00000380701 REREQ9P2R6 1566 aa7.59□□□□□ -1.19
CCDC171-201ENST00000380701 TFRCP02786 760 aaKnown RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms