RNA–Protein interactions for RNA: ENST00000378600.7

DDB2-202, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene DDB2, Length 717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-202ENST00000378600 TRIP11Q15643 1979 aa12.45□□□□□ -0.42
DDB2-202ENST00000378600 HNRNPDLO14979 420 aaKnown RBP12.45□□□□□ -0.42
DDB2-202ENST00000378600 PPP1R37O75864 691 aa12.45□□□□□ -0.42
DDB2-202ENST00000378600 ZNF202O95125 648 aa12.45□□□□□ -0.42
DDB2-202ENST00000378600 LINC00271P0C7V0 271 aa12.45□□□□□ -0.42
DDB2-202ENST00000378600 IBSPP21815 317 aaPredicted RBP12.45□□□□□ -0.42
DDB2-202ENST00000378600 CTNNB1P35222 781 aa12.45□□□□□ -0.42
DDB2-202ENST00000378600 PPM1AP35813 382 aa12.45□□□□□ -0.42
DDB2-202ENST00000378600 LIG4P49917 911 aa12.45□□□□□ -0.42
DDB2-202ENST00000378600 YARSP54577 528 aaKnown RBP12.45□□□□□ -0.42
DDB2-202ENST00000378600 COASYQ13057 564 aa12.45□□□□□ -0.42
DDB2-202ENST00000378600 PSMD2Q13200 908 aa12.45□□□□□ -0.42
DDB2-202ENST00000378600 ZNF568Q3ZCX4 644 aa12.45□□□□□ -0.42
DDB2-202ENST00000378600 LONRF3Q496Y0 759 aa12.45□□□□□ -0.42
DDB2-202ENST00000378600 KRBA2Q6ZNG9 492 aa12.45□□□□□ -0.42
DDB2-202ENST00000378600 STAMQ92783 540 aa12.45□□□□□ -0.42
DDB2-202ENST00000378600 LPPQ93052 612 aa12.45□□□□□ -0.42
DDB2-202ENST00000378600 CCDC47Q96A33 483 aaKnown RBP12.45□□□□□ -0.42
DDB2-202ENST00000378600 BICD1Q96G01 975 aa12.45□□□□□ -0.42
DDB2-202ENST00000378600 PAGE5Q96GU1 130 aa12.45□□□□□ -0.42
DDB2-202ENST00000378600 TIGD1Q96MW7 591 aa12.45□□□□□ -0.42
DDB2-202ENST00000378600 FAM161BQ96MY7 647 aa12.45□□□□□ -0.42
DDB2-202ENST00000378600 FAM193BQ96PV7 902 aaPredicted RBP12.45□□□□□ -0.42
DDB2-202ENST00000378600 CDX2Q99626 313 aaPredicted RBP12.45□□□□□ -0.42
DDB2-202ENST00000378600 C17orf80Q9BSJ5 609 aa12.45□□□□□ -0.42
DDB2-202ENST00000378600 CCDC94Q9BW85 323 aaPredicted RBP12.45□□□□□ -0.42
DDB2-202ENST00000378600 STRA6Q9BX79 667 aa12.45□□□□□ -0.42
DDB2-202ENST00000378600 NXF3Q9H4D5 531 aaKnown RBP12.45□□□□□ -0.42
DDB2-202ENST00000378600 PRDM12Q9H4Q4 367 aa12.45□□□□□ -0.42
DDB2-202ENST00000378600 TSHZ2Q9NRE2 1034 aa12.45□□□□□ -0.42
DDB2-202ENST00000378600 TYW1Q9NV66 732 aaKnown RBP12.45□□□□□ -0.42
DDB2-202ENST00000378600 HOOK1Q9UJC3 728 aaKnown RBP12.45□□□□□ -0.42
DDB2-202ENST00000378600 STXBP5LQ9Y2K9 1186 aa12.45□□□□□ -0.42
DDB2-202ENST00000378600 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.45□□□□□ -0.42
DDB2-202ENST00000378600 MRPL42Q9Y6G3 142 aaKnown RBP12.45□□□□□ -0.42
DDB2-202ENST00000378600 UBE4BO95155 1302 aa12.44□□□□□ -0.42
DDB2-202ENST00000378600 ARL5CA6NH57 179 aa12.44□□□□□ -0.42
DDB2-202ENST00000378600 TTLL13PA6NNM8 815 aa12.44□□□□□ -0.42
DDB2-202ENST00000378600 EIF3DO15371 548 aaKnown RBP eCLIP12.44□□□□□ -0.42
DDB2-202ENST00000378600 GTPBP6O43824 516 aaPredicted RBP12.44□□□□□ -0.42
DDB2-202ENST00000378600 NR1I2O75469 434 aa12.44□□□□□ -0.42
DDB2-202ENST00000378600 ARHGEF15O94989 841 aa12.44□□□□□ -0.42
DDB2-202ENST00000378600 GCNT3O95395 438 aa12.44□□□□□ -0.42
DDB2-202ENST00000378600 EDN1P05305 212 aa12.44□□□□□ -0.42
DDB2-202ENST00000378600 NMT1P30419 496 aaKnown RBP12.44□□□□□ -0.42
DDB2-202ENST00000378600 GRM5P41594 1212 aa12.44□□□□□ -0.42
DDB2-202ENST00000378600 AFMP43652 599 aa12.44□□□□□ -0.42
DDB2-202ENST00000378600 ALDH7A1P49419 539 aaKnown RBP12.44□□□□□ -0.42
DDB2-202ENST00000378600 GATMP50440 423 aa12.44□□□□□ -0.42
DDB2-202ENST00000378600 POU5F1Q01860 360 aaKnown RBP12.44□□□□□ -0.42
DDB2-202ENST00000378600 UBE3AQ05086 875 aa12.44□□□□□ -0.42
DDB2-202ENST00000378600 RNASELQ05823 741 aaKnown RBP12.44□□□□□ -0.42
DDB2-202ENST00000378600 FAM160A1Q05DH4 1040 aa12.44□□□□□ -0.42
DDB2-202ENST00000378600 MCL1Q07820 350 aa12.44□□□□□ -0.42
DDB2-202ENST00000378600 GRIK3Q13003 919 aa12.44□□□□□ -0.42
DDB2-202ENST00000378600 NOLC1Q14978 699 aaKnown RBP eCLIP12.44□□□□□ -0.42
DDB2-202ENST00000378600 POSTNQ15063 836 aa12.44□□□□□ -0.42
DDB2-202ENST00000378600 PTPROQ16827 1216 aa12.44□□□□□ -0.42
DDB2-202ENST00000378600 L1TD1Q5T7N2 865 aaKnown RBP12.44□□□□□ -0.42
DDB2-202ENST00000378600 CLEC17AQ6ZS10 378 aa12.44□□□□□ -0.42
DDB2-202ENST00000378600 CDR2LQ86X02 465 aaPredicted RBP12.44□□□□□ -0.42
DDB2-202ENST00000378600 ELOA2Q8IYF1 753 aaPredicted RBP12.44□□□□□ -0.42
DDB2-202ENST00000378600 ZNF558Q96NG5 402 aa12.44□□□□□ -0.42
DDB2-202ENST00000378600 GUCD1Q96NT3 240 aa12.44□□□□□ -0.42
DDB2-202ENST00000378600 ACCSQ96QU6 501 aa12.44□□□□□ -0.42
DDB2-202ENST00000378600 RPS6KC1Q96S38 1066 aa12.44□□□□□ -0.42
DDB2-202ENST00000378600 TSPAN18Q96SJ8 248 aa12.44□□□□□ -0.42
DDB2-202ENST00000378600 TMEM175Q9BSA9 504 aa12.44□□□□□ -0.42
DDB2-202ENST00000378600 CDT1Q9H211 546 aa12.44□□□□□ -0.42
DDB2-202ENST00000378600 CWH43Q9H720 699 aa12.44□□□□□ -0.42
DDB2-202ENST00000378600 TBC1D13Q9NVG8 400 aa12.44□□□□□ -0.42
DDB2-202ENST00000378600 PARP2Q9UGN5 583 aa12.44□□□□□ -0.42
DDB2-202ENST00000378600 SZT2Q5T011 3432 aa12.43□□□□□ -0.42
DDB2-202ENST00000378600 CHD9Q3L8U1 2897 aa12.43□□□□□ -0.42
DDB2-202ENST00000378600 MEIS3P2A8K0S8 358 aa12.43□□□□□ -0.42
DDB2-202ENST00000378600 KIAA0391O15091 583 aaKnown RBP12.43□□□□□ -0.42
DDB2-202ENST00000378600 LDHAP00338 332 aaKnown RBP12.43□□□□□ -0.42
DDB2-202ENST00000378600 MLH1P40692 756 aa12.43□□□□□ -0.42
DDB2-202ENST00000378600 MATR3P43243 847 aaKnown RBP eCLIP12.43□□□□□ -0.422e-9■■■■■ 33.8
DDB2-202ENST00000378600 SNRPFP62306 86 aaKnown RBP12.43□□□□□ -0.42
DDB2-202ENST00000378600 PLCB3Q01970 1234 aa12.43□□□□□ -0.42
DDB2-202ENST00000378600 EHHADHQ08426 723 aa12.43□□□□□ -0.42
DDB2-202ENST00000378600 GPM6BQ13491 265 aa12.43□□□□□ -0.42
DDB2-202ENST00000378600 HSP90AA2PQ14568 343 aaPredicted RBP12.43□□□□□ -0.42
DDB2-202ENST00000378600 ZC2HC1CQ53FD0 456 aaPredicted RBP12.43□□□□□ -0.42
DDB2-202ENST00000378600 FAM26FQ5R3K3 315 aa12.43□□□□□ -0.42
DDB2-202ENST00000378600 EEF1DP3Q658K8 133 aa12.43□□□□□ -0.42
DDB2-202ENST00000378600 PDE12Q6L8Q7 609 aaKnown RBP12.43□□□□□ -0.42
DDB2-202ENST00000378600 KCNT2Q6UVM3 1135 aa12.43□□□□□ -0.42
DDB2-202ENST00000378600 LRRC55Q6ZSA7 311 aa12.43□□□□□ -0.42
DDB2-202ENST00000378600 FMR1NBQ8N0W7 255 aaPredicted RBP12.43□□□□□ -0.42
DDB2-202ENST00000378600 COLGALT1Q8NBJ5 622 aa12.43□□□□□ -0.42
DDB2-202ENST00000378600 ACAP3Q96P50 834 aa12.43□□□□□ -0.42
DDB2-202ENST00000378600 CERS4Q9HA82 394 aa12.43□□□□□ -0.42
DDB2-202ENST00000378600 SNTG2Q9NY99 539 aa12.43□□□□□ -0.42
DDB2-202ENST00000378600 MTUS1Q9ULD2 1270 aa12.43□□□□□ -0.42
DDB2-202ENST00000378600 LZTS1Q9Y250 596 aa12.43□□□□□ -0.42
DDB2-202ENST00000378600 HES2Q9Y543 173 aa12.43□□□□□ -0.42
DDB2-202ENST00000378600 RBAK-RBAKDNI3L0D1 243 aa12.42□□□□□ -0.42
DDB2-202ENST00000378600 ABLIM1O14639 778 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms