RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 DEPTORQ8TB45 409 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 NRBP1Q9UHY1 535 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 NPPAP01160 153 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 FTLP02792 175 aaPredicted RBP5.24□□□□□ -1.57
PCDH9-201ENST00000377861 PLTPP55058 493 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 ZPBP2Q6X784 338 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 CLDN3O15551 220 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 NR3C1P04150 777 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 CDH2P19022 906 aaPredicted RBP5.24□□□□□ -1.57
PCDH9-201ENST00000377861 HOXA10P31260 410 aaPredicted RBP5.24□□□□□ -1.57
PCDH9-201ENST00000377861 IFNA8P32881 189 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 CHRNDQ07001 517 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 HIF1AQ16665 826 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 COLGALT2Q8IYK4 626 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 FNIP1Q8TF40 1166 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 TIMMDC1Q9NPL8 285 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 RFX5P48382 616 aaPredicted RBP5.24□□□□□ -1.57
PCDH9-201ENST00000377861 EEF2P13639 858 aaKnown RBP5.24□□□□□ -1.57
PCDH9-201ENST00000377861 PNPT1Q8TCS8 783 aaKnown RBP5.24□□□□□ -1.57
PCDH9-201ENST00000377861 ARHGEF2Q92974 986 aaKnown RBP5.24□□□□□ -1.57
PCDH9-201ENST00000377861 MAGED4Q96JG8 741 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 AASDHPPTQ9NRN7 309 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 BAIAP2L1Q9UHR4 511 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 CCNG1P51959 295 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 KLHDC7AQ5VTJ3 777 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 RAB44Q7Z6P3 723 aaPredicted RBP5.24□□□□□ -1.57
PCDH9-201ENST00000377861 STON2Q8WXE9 905 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 BSNDQ8WZ55 320 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 ZNF746Q6NUN9 644 aaPredicted RBP5.24□□□□□ -1.57
PCDH9-201ENST00000377861 SCYL3Q8IZE3 742 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 SOX30O94993 753 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 FGFR2P21802 821 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 MED21Q13503 144 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 PTGISQ16647 500 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 GET4Q7L5D6 327 aaPredicted RBP5.24□□□□□ -1.57
PCDH9-201ENST00000377861 UNC5CLQ8IV45 518 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 AENQ8WTP8 325 aaKnown RBP5.24□□□□□ -1.57
PCDH9-201ENST00000377861 KPNA6O60684 536 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 DNAJA2O60884 412 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 MTA2O94776 668 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 FDPSP14324 419 aaKnown RBP5.24□□□□□ -1.57
PCDH9-201ENST00000377861 EZH1Q92800 747 aaPredicted RBP5.24□□□□□ -1.57
PCDH9-201ENST00000377861 PSMA4P25789 261 aaKnown RBP5.24□□□□□ -1.57
PCDH9-201ENST00000377861 FXR1P51114 621 aaKnown RBP eCLIP5.24□□□□□ -1.57
PCDH9-201ENST00000377861 MUC13Q9H3R2 512 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 RCOR3Q9P2K3 495 aaPredicted RBP5.24□□□□□ -1.57
PCDH9-201ENST00000377861 ZNF212Q9UDV6 495 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 ALG6Q9Y672 507 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 PNMA8CA0A1B0GUJ8 204 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 PDIA6Q15084 440 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 CREB3O43889 395 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 METTL16Q86W50 562 aaKnown RBP5.24□□□□□ -1.57
PCDH9-201ENST00000377861 RBBP8NLQ8NC74 664 aaPredicted RBP5.24□□□□□ -1.57
PCDH9-201ENST00000377861 UBE2OQ9C0C9 1292 aaKnown RBP5.24□□□□□ -1.57
PCDH9-201ENST00000377861 ACVR2BQ13705 512 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 GID8Q9NWU2 228 aa5.24□□□□□ -1.57
PCDH9-201ENST00000377861 GRIN2DO15399 1336 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 MAPK9P45984 424 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 DLGAP5Q15398 846 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 PCDHA3Q9Y5H8 950 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 ZNF536O15090 1300 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 MXI1P50539 228 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 METTL3Q86U44 580 aaKnown RBP5.23□□□□□ -1.57
PCDH9-201ENST00000377861 RDH11Q8TC12 318 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 RILPQ96NA2 401 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 FNIP2Q9P278 1114 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.23□□□□□ -1.57
PCDH9-201ENST00000377861 HACD1B0YJ81 288 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 F8W031 263 aaPredicted RBP5.23□□□□□ -1.57
PCDH9-201ENST00000377861 LBRQ14739 615 aaKnown RBP5.23□□□□□ -1.57
PCDH9-201ENST00000377861 FAM83AQ86UY5 434 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 CREG2Q8IUH2 290 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 OSBPL6Q9BZF3 934 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 SAC3D1A6NKF1 404 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 MATN2O00339 956 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 HMGCRP04035 888 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 THAP1Q9NVV9 213 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 PCDHB6Q9Y5E3 794 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 HPCAL4Q9UM19 191 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 FAM205AQ6ZU69 1335 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 VIL1P09327 827 aaKnown RBP5.23□□□□□ -1.57
PCDH9-201ENST00000377861 PLCG1P19174 1290 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 TAC1P20366 129 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 ZNF33AQ06730 810 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 ZNF589Q86UQ0 364 aaPredicted RBP5.23□□□□□ -1.57
PCDH9-201ENST00000377861 C4orf19Q8IY42 314 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 CTNND2Q9UQB3 1225 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 MFSD14BQ5SR56 506 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 TRIM50Q86XT4 487 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 CORO1CQ9ULV4 474 aaPredicted RBP5.23□□□□□ -1.57
PCDH9-201ENST00000377861 ORC6Q9Y5N6 252 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 GYPCP04921 128 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 NSL1Q96IY1 281 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 SEC16BQ96JE7 1060 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 DEFB129Q9H1M3 183 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 ASB7Q9H672 318 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 TAB2Q9NYJ8 693 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 CYP27B1O15528 508 aa5.23□□□□□ -1.57
PCDH9-201ENST00000377861 YARSP54577 528 aaKnown RBP5.23□□□□□ -1.57
PCDH9-201ENST00000377861 OCA2Q04671 838 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms