RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 PUS3Q9BZE2 481 aaKnown RBP8.49□□□□□ -1.05
USP48-203ENST00000374732 SRCIN1Q9C0H9 1055 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 CDH19Q9H159 772 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 DCTPP1Q9H773 170 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 BMP2KQ9NSY1 1161 aaPredicted RBP8.49□□□□□ -1.05
USP48-203ENST00000374732 ZFATQ9P243 1243 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 PPARGC1AQ9UBK2 798 aaKnown RBP8.49□□□□□ -1.05
USP48-203ENST00000374732 AXIN2Q9Y2T1 843 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 TTC41PQ6P2S7 1318 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 PAPPAQ13219 1627 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 NUTM2FA1L443 756 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 OR6C65A6NJZ3 312 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 H3BUI4 141 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 SULT1B1O43704 296 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 TACC1O75410 805 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 PPP1R37O75864 691 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 ATP1A3P13637 1013 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 IL32P24001 234 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 MZF1P28698 734 aaPredicted RBP8.49□□□□□ -1.05
USP48-203ENST00000374732 TXLNAP40222 546 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 TUBA4AP68366 448 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 NOP14P78316 857 aaKnown RBP8.49□□□□□ -1.05
USP48-203ENST00000374732 C17orf67Q0P5P2 114 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 SQSTM1Q13501 440 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 STIM1Q13586 685 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 MTHFSDQ2M296 383 aaKnown RBP8.49□□□□□ -1.05
USP48-203ENST00000374732 PPP1R15BQ5SWA1 713 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 FYB2Q5VWT5 728 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 RAB12Q6IQ22 244 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 GTF3C2Q8WUA4 911 aaPredicted RBP8.49□□□□□ -1.05
USP48-203ENST00000374732 EMID1Q96A84 441 aaPredicted RBP8.49□□□□□ -1.05
USP48-203ENST00000374732 OPTNQ96CV9 577 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 DEPDC7Q96QD5 511 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 BAG5Q9UL15 447 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 COG5Q9UP83 839 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 NHSQ6T4R5 1651 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 ZPR1O75312 459 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 CD2BP2O95400 341 aaKnown RBP8.48□□□□□ -1.05
USP48-203ENST00000374732 KRT1P04264 644 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 ALOX12P18054 663 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 HOXC9P31274 260 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 MTTPP55157 894 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 KRT85P78386 507 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 GRAMD4Q6IC98 578 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 TMEM154Q6P9G4 183 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 FASTKD5Q7L8L6 764 aaKnown RBP8.48□□□□□ -1.05
USP48-203ENST00000374732 SRGAP1Q7Z6B7 1085 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 TTC5Q8N0Z6 440 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 PPFIBP2Q8ND30 876 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 IL17REQ8NFR9 667 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 PLBD2Q8NHP8 589 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 FAM200AQ8TCP9 573 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 MTMR8Q96EF0 704 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 PPP1R36Q96LQ0 422 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 TBATAQ96M53 351 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 MFSD14AQ96MC6 490 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 AIFM3Q96NN9 605 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 DNAJC7Q99615 494 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 MENTQ9BUN1 341 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 PCMTD2Q9NV79 361 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 TSC22D4Q9Y3Q8 395 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 N4BP2Q86UW6 1770 aaPredicted RBP8.48□□□□□ -1.05
USP48-203ENST00000374732 NFAT5O94916 1531 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 CTAGE9A4FU28 777 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 EYA2O00167 538 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 APOL1O14791 398 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 FGF18O76093 207 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 APOA4P06727 396 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 RETP07949 1114 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 CCDC166P0CW27 439 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 HTR3AP46098 478 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 AARSP49588 968 aaKnown RBP eCLIP8.48□□□□□ -1.05
USP48-203ENST00000374732 TMPRSS15P98073 1019 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 CLUL1Q15846 466 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 SLC14A2Q15849 920 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 ERFEQ4G0M1 354 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 KRBOX4Q5JUW0 171 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 ITPRIPL1Q6GPH6 555 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 USP51Q70EK9 711 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 VSIG1Q86XK7 387 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 BAP1Q92560 729 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 SLC47A1Q96FL8 570 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 SNF8Q96H20 258 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 SMC6Q96SB8 1091 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 ELAC2Q9BQ52 826 aaKnown RBP8.48□□□□□ -1.05
USP48-203ENST00000374732 DDX23Q9BUQ8 820 aaKnown RBP8.48□□□□□ -1.05
USP48-203ENST00000374732 GHITMQ9H3K2 345 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 NEK6Q9HC98 313 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 OBP2AQ9NY56 170 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 HSPBP1Q9NZL4 362 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 ADGRE2Q9UHX3 823 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 FBXL21Q9UKT6 434 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 CORO1CQ9ULV4 474 aaPredicted RBP8.48□□□□□ -1.05
USP48-203ENST00000374732 HEY1Q9Y5J3 304 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 COL18A1P39060 1754 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 LTN1O94822 1766 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 C16orf96A6NNT2 1141 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 RPS6KA5O75582 802 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 GLRX3O76003 335 aaKnown RBP8.48□□□□□ -1.05
USP48-203ENST00000374732 EOMESO95936 686 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms