RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 KCNV2Q8TDN2 545 aa8.84□□□□□ -0.99
HSPG2-203ENST00000374695 FBXO2Q9UK22 296 aaPredicted RBP8.84□□□□□ -0.99
HSPG2-203ENST00000374695 MAP1BP46821 2468 aaKnown RBP8.84□□□□□ -0.99
HSPG2-203ENST00000374695 SPAG6O75602 509 aa8.84□□□□□ -1
HSPG2-203ENST00000374695 KCNA2P16389 499 aa8.84□□□□□ -1
HSPG2-203ENST00000374695 CAPZA2P47755 286 aa8.84□□□□□ -1
HSPG2-203ENST00000374695 NDUFA5Q16718 116 aa8.84□□□□□ -1
HSPG2-203ENST00000374695 C11orf57Q6ZUT1 292 aaPredicted RBP8.84□□□□□ -1
HSPG2-203ENST00000374695 ZBTB38Q8NAP3 1195 aaPredicted RBP8.84□□□□□ -1
HSPG2-203ENST00000374695 KRT35Q92764 455 aa8.84□□□□□ -1
HSPG2-203ENST00000374695 CDY2AQ9Y6F7 541 aa8.84□□□□□ -1
HSPG2-203ENST00000374695 CDY1Q9Y6F8 540 aa8.84□□□□□ -1
HSPG2-203ENST00000374695 MMP1P03956 469 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 ACADSP16219 412 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 EFL1Q7Z2Z2 1120 aaKnown RBP8.83□□□□□ -1
HSPG2-203ENST00000374695 CNPY3Q9BT09 278 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 OSBPL10Q9BXB5 764 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 TUBGCP4Q9UGJ1 667 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 DCTN4Q9UJW0 460 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 SOX13Q9UN79 622 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 ADAMTS12P58397 1594 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 SLC1A1P43005 524 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 FASTKD5Q7L8L6 764 aaKnown RBP8.83□□□□□ -1
HSPG2-203ENST00000374695 TRIM13O60858 407 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 H2AFYO75367 372 aaKnown RBP8.83□□□□□ -1
HSPG2-203ENST00000374695 RESP18Q5W5W9 173 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 SIKE1Q9BRV8 207 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.83□□□□□ -1
HSPG2-203ENST00000374695 MTO1Q9Y2Z2 717 aaKnown RBP8.83□□□□□ -1
HSPG2-203ENST00000374695 ADD1P35611 737 aaKnown RBP8.83□□□□□ -1
HSPG2-203ENST00000374695 PPP1R14BQ96C90 147 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 ZFATQ9P243 1243 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 CEP152O94986 1710 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 SMAPO00193 183 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 DTNBO60941 627 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 CDO1Q16878 200 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 NUDT18Q6ZVK8 323 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 RBM46Q8TBY0 533 aaKnown RBP8.83□□□□□ -1
HSPG2-203ENST00000374695 ZNF564Q8TBZ8 553 aaPredicted RBP8.83□□□□□ -1
HSPG2-203ENST00000374695 MB21D1Q8N884 522 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 PRRG3Q9BZD7 231 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 SMARCAD1Q9H4L7 1026 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 PRPF4O43172 522 aaKnown RBP eCLIP8.83□□□□□ -11e-7■■■■■ 32
HSPG2-203ENST00000374695 SDC4P31431 198 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 RASGRF1Q13972 1273 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 IKBIPQ70UQ0 350 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 DEPDC7Q96QD5 511 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 OSBPL5Q9H0X9 879 aaPredicted RBP8.83□□□□□ -1
HSPG2-203ENST00000374695 SNAP25P60880 206 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 URGCPQ8TCY9 931 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 FAM162AQ96A26 154 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 SH3KBP1Q96B97 665 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 RBBP8Q99708 897 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 XDHP47989 1333 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 PITPNM2Q9BZ72 1349 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 FAM160B2Q86V87 743 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 SULF1Q8IWU6 871 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 ASAP3Q8TDY4 903 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 DHX36Q9H2U1 1008 aaKnown RBP8.83□□□□□ -1
HSPG2-203ENST00000374695 NGRNQ9NPE2 291 aaKnown RBP8.83□□□□□ -1
HSPG2-203ENST00000374695 APPL1Q9UKG1 709 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 YEATS2Q9ULM3 1422 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 BTN2A2Q8WVV5 523 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 GPR108Q9NPR9 543 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 CFAP69A5D8W1 941 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 TYK2P29597 1187 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 VCPP55072 806 aaKnown RBP8.83□□□□□ -1
HSPG2-203ENST00000374695 LRIG3Q6UXM1 1119 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 UNC13DQ70J99 1090 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 DDHD1Q8NEL9 900 aa8.83□□□□□ -1
HSPG2-203ENST00000374695 SRPK1Q96SB4 655 aaKnown RBP8.83□□□□□ -1
HSPG2-203ENST00000374695 PNMA6FA0A0J9YX94 578 aa8.82□□□□□ -1
HSPG2-203ENST00000374695 DSG1Q02413 1049 aa8.82□□□□□ -1
HSPG2-203ENST00000374695 BFSP2Q13515 415 aa8.82□□□□□ -1
HSPG2-203ENST00000374695 SSH3Q8TE77 659 aa8.82□□□□□ -1
HSPG2-203ENST00000374695 AIPL1Q9NZN9 384 aa8.82□□□□□ -1
HSPG2-203ENST00000374695 NRBP1Q9UHY1 535 aa8.82□□□□□ -1
HSPG2-203ENST00000374695 WDR19Q8NEZ3 1342 aa8.82□□□□□ -1
HSPG2-203ENST00000374695 LINC00301Q8NCQ3 95 aa8.82□□□□□ -1
HSPG2-203ENST00000374695 DCAF4Q8WV16 495 aa8.82□□□□□ -1
HSPG2-203ENST00000374695 EPC1Q9H2F5 836 aa8.82□□□□□ -1
HSPG2-203ENST00000374695 CD58P19256 250 aa8.82□□□□□ -1
HSPG2-203ENST00000374695 IYDQ6PHW0 289 aa8.82□□□□□ -1
HSPG2-203ENST00000374695 RIBC1Q8N443 379 aaPredicted RBP8.82□□□□□ -1
HSPG2-203ENST00000374695 OLFM1Q99784 485 aa8.82□□□□□ -1
HSPG2-203ENST00000374695 BRAFP15056 766 aa8.82□□□□□ -1
HSPG2-203ENST00000374695 GTF2H3Q13889 308 aa8.82□□□□□ -1
HSPG2-203ENST00000374695 NCF4Q15080 339 aa8.82□□□□□ -1
HSPG2-203ENST00000374695 MAP4K1Q92918 833 aa8.82□□□□□ -1
HSPG2-203ENST00000374695 PI4K2BG5E9Z4 385 aa8.82□□□□□ -1
HSPG2-203ENST00000374695 ECM2O94769 699 aaPredicted RBP8.82□□□□□ -1
HSPG2-203ENST00000374695 SERPINB9P50453 376 aa8.82□□□□□ -1
HSPG2-203ENST00000374695 TUBA4AP68366 448 aa8.82□□□□□ -1
HSPG2-203ENST00000374695 PAGE5Q96GU1 130 aa8.82□□□□□ -1
HSPG2-203ENST00000374695 SLC13A1Q9BZW2 595 aa8.82□□□□□ -1
HSPG2-203ENST00000374695 NR3C1P04150 777 aa8.82□□□□□ -1
HSPG2-203ENST00000374695 MARK3P27448 753 aa8.82□□□□□ -1
HSPG2-203ENST00000374695 DNAJC9Q8WXX5 260 aa8.82□□□□□ -1
HSPG2-203ENST00000374695 LEMD3Q9Y2U8 911 aa8.82□□□□□ -1
HSPG2-203ENST00000374695 HEY1Q9Y5J3 304 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms