RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 PHKBQ93100 1093 aa11.34□□□□□ -0.59
TRERF1-203ENST00000372917 GPATCH1Q9BRR8 931 aaKnown RBP11.34□□□□□ -0.59
TRERF1-203ENST00000372917 MYL10Q9BUA6 226 aa11.34□□□□□ -0.59
TRERF1-203ENST00000372917 ZNF212Q9UDV6 495 aa11.34□□□□□ -0.59
TRERF1-203ENST00000372917 AMACRQ9UHK6 382 aa11.34□□□□□ -0.59
TRERF1-203ENST00000372917 RABGAP1Q9Y3P9 1069 aa11.34□□□□□ -0.59
TRERF1-203ENST00000372917 RIMS1Q86UR5 1692 aaKnown RBP11.34□□□□□ -0.59
TRERF1-203ENST00000372917 ARHGAP10A1A4S6 786 aa11.34□□□□□ -0.59
TRERF1-203ENST00000372917 RNF113AO15541 343 aaKnown RBP11.34□□□□□ -0.59
TRERF1-203ENST00000372917 STRNO43815 780 aa11.34□□□□□ -0.59
TRERF1-203ENST00000372917 MARCH6O60337 910 aa11.34□□□□□ -0.59
TRERF1-203ENST00000372917 CLPTM1O96005 669 aa11.34□□□□□ -0.59
TRERF1-203ENST00000372917 CHEK2O96017 543 aa11.34□□□□□ -0.59
TRERF1-203ENST00000372917 SNRPA1P09661 255 aaKnown RBP11.34□□□□□ -0.59
TRERF1-203ENST00000372917 GCKRQ14397 625 aa11.34□□□□□ -0.59
TRERF1-203ENST00000372917 TGFBIQ15582 683 aa11.34□□□□□ -0.59
TRERF1-203ENST00000372917 LDHAL6AQ6ZMR3 332 aa11.34□□□□□ -0.59
TRERF1-203ENST00000372917 CATIPQ7Z7H3 387 aa11.34□□□□□ -0.59
TRERF1-203ENST00000372917 EPS8L3Q8TE67 593 aaKnown RBP11.34□□□□□ -0.59
TRERF1-203ENST00000372917 TBC1D23Q9NUY8 699 aa11.34□□□□□ -0.59
TRERF1-203ENST00000372917 PTPRUQ92729 1446 aa11.34□□□□□ -0.59
TRERF1-203ENST00000372917 GOLGA8IPA6NC78 632 aa11.34□□□□□ -0.59
TRERF1-203ENST00000372917 PRPF3O43395 683 aaKnown RBP11.34□□□□□ -0.59
TRERF1-203ENST00000372917 PALMO75781 387 aa11.34□□□□□ -0.59
TRERF1-203ENST00000372917 SERPINB6P35237 376 aa11.34□□□□□ -0.59
TRERF1-203ENST00000372917 STT3AP46977 705 aa11.34□□□□□ -0.59
TRERF1-203ENST00000372917 EXOSC10Q01780 885 aaKnown RBP11.34□□□□□ -0.59
TRERF1-203ENST00000372917 CD300CQ08708 224 aa11.34□□□□□ -0.59
TRERF1-203ENST00000372917 IFIT5Q13325 482 aaKnown RBP11.34□□□□□ -0.59
TRERF1-203ENST00000372917 TJAP1Q5JTD0 557 aa11.34□□□□□ -0.59
TRERF1-203ENST00000372917 NT5DC1Q5TFE4 455 aa11.34□□□□□ -0.59
TRERF1-203ENST00000372917 RNF43Q68DV7 783 aa11.34□□□□□ -0.59
TRERF1-203ENST00000372917 TMTC3Q6ZXV5 915 aa11.34□□□□□ -0.59
TRERF1-203ENST00000372917 RAB3IL1Q8TBN0 382 aa11.34□□□□□ -0.59
TRERF1-203ENST00000372917 STMN4Q9H169 189 aaPredicted RBP11.34□□□□□ -0.59
TRERF1-203ENST00000372917 PLGRKTQ9HBL7 147 aa11.34□□□□□ -0.59
TRERF1-203ENST00000372917 STX18Q9P2W9 335 aaKnown RBP11.34□□□□□ -0.59
TRERF1-203ENST00000372917 PCDHGA3Q9Y5H0 932 aa11.34□□□□□ -0.59
TRERF1-203ENST00000372917 MAD1L1Q9Y6D9 718 aa11.34□□□□□ -0.59
TRERF1-203ENST00000372917 ZNF609O15014 1411 aa11.34□□□□□ -0.59
TRERF1-203ENST00000372917 TMEM120BA0PK00 339 aa11.33□□□□□ -0.6
TRERF1-203ENST00000372917 PABPC1P11940 636 aaKnown RBP11.33□□□□□ -0.6
TRERF1-203ENST00000372917 CHKAP35790 457 aa11.33□□□□□ -0.6
TRERF1-203ENST00000372917 ENTPD1P49961 510 aa11.33□□□□□ -0.6
TRERF1-203ENST00000372917 CCDC81Q6ZN84 652 aa11.33□□□□□ -0.6
TRERF1-203ENST00000372917 USP49Q70CQ1 688 aa11.33□□□□□ -0.6
TRERF1-203ENST00000372917 PIAS4Q8N2W9 510 aaPredicted RBP11.33□□□□□ -0.6
TRERF1-203ENST00000372917 ANKLE1Q8NAG6 615 aa11.33□□□□□ -0.6
TRERF1-203ENST00000372917 LPIN2Q92539 896 aa11.33□□□□□ -0.6
TRERF1-203ENST00000372917 IP6K1Q92551 441 aa11.33□□□□□ -0.6
TRERF1-203ENST00000372917 SLC7A6OSQ96CW6 309 aaPredicted RBP11.33□□□□□ -0.6
TRERF1-203ENST00000372917 MTMR8Q96EF0 704 aa11.33□□□□□ -0.6
TRERF1-203ENST00000372917 KLHL4Q9C0H6 718 aa11.33□□□□□ -0.6
TRERF1-203ENST00000372917 AS3MTQ9HBK9 375 aa11.33□□□□□ -0.6
TRERF1-203ENST00000372917 ZNF304Q9HCX3 659 aa11.33□□□□□ -0.6
TRERF1-203ENST00000372917 PEAK1Q9H792 1746 aa11.33□□□□□ -0.6
TRERF1-203ENST00000372917 A6NL46 340 aa11.33□□□□□ -0.6
TRERF1-203ENST00000372917 HSPD1P10809 573 aaKnown RBP11.33□□□□□ -0.6
TRERF1-203ENST00000372917 EIF4A3P38919 411 aaKnown RBP11.33□□□□□ -0.6
TRERF1-203ENST00000372917 GPC3P51654 580 aa11.33□□□□□ -0.6
TRERF1-203ENST00000372917 DPYDQ12882 1025 aa11.33□□□□□ -0.6
TRERF1-203ENST00000372917 PAK1Q13153 545 aa11.33□□□□□ -0.6
TRERF1-203ENST00000372917 CLEC4GQ6UXB4 293 aa11.33□□□□□ -0.6
TRERF1-203ENST00000372917 USP38Q8NB14 1042 aa11.33□□□□□ -0.6
TRERF1-203ENST00000372917 ZBED2Q9BTP6 218 aa11.33□□□□□ -0.6
TRERF1-203ENST00000372917 SEZ6LQ9BYH1 1024 aa11.33□□□□□ -0.6
TRERF1-203ENST00000372917 BLZF1Q9H2G9 400 aa11.33□□□□□ -0.6
TRERF1-203ENST00000372917 CCDC134Q9H6E4 229 aa11.33□□□□□ -0.6
TRERF1-203ENST00000372917 METTL14Q9HCE5 456 aaKnown RBP11.33□□□□□ -0.6
TRERF1-203ENST00000372917 NDE1Q9NXR1 346 aa11.33□□□□□ -0.6
TRERF1-203ENST00000372917 SALL4Q9UJQ4 1053 aa11.33□□□□□ -0.6
TRERF1-203ENST00000372917 TLL2Q9Y6L7 1015 aa11.33□□□□□ -0.6
TRERF1-203ENST00000372917 CCDC162PA2VCL2 907 aa11.33□□□□□ -0.6
TRERF1-203ENST00000372917 PPP1R3GB7ZBB8 358 aa11.33□□□□□ -0.6
TRERF1-203ENST00000372917 GYG2O15488 501 aa11.33□□□□□ -0.6
TRERF1-203ENST00000372917 TSPAN9O75954 239 aa11.33□□□□□ -0.6
TRERF1-203ENST00000372917 AGTP01019 485 aa11.33□□□□□ -0.6
TRERF1-203ENST00000372917 GCP02774 474 aa11.33□□□□□ -0.6
TRERF1-203ENST00000372917 CYP1A2P05177 515 aa11.33□□□□□ -0.6
TRERF1-203ENST00000372917 PTPN4P29074 926 aa11.33□□□□□ -0.6
TRERF1-203ENST00000372917 GSSP48637 474 aa11.33□□□□□ -0.6
TRERF1-203ENST00000372917 SSRP1Q08945 709 aaKnown RBP11.33□□□□□ -0.6
TRERF1-203ENST00000372917 C6orf118Q5T5N4 469 aa11.33□□□□□ -0.6
TRERF1-203ENST00000372917 GSDMBQ8TAX9 411 aa11.33□□□□□ -0.6
TRERF1-203ENST00000372917 ZKSCAN3Q9BRR0 538 aa11.33□□□□□ -0.6
TRERF1-203ENST00000372917 TNRQ92752 1358 aa11.33□□□□□ -0.6
TRERF1-203ENST00000372917 MYH2Q9UKX2 1941 aa11.33□□□□□ -0.6
TRERF1-203ENST00000372917 NEURL1BA8MQ27 555 aa11.32□□□□□ -0.6
TRERF1-203ENST00000372917 DDX3XO00571 662 aaKnown RBP eCLIP11.32□□□□□ -0.6
TRERF1-203ENST00000372917 ZBTB43O43298 467 aa11.32□□□□□ -0.6
TRERF1-203ENST00000372917 DCTN3O75935 186 aa11.32□□□□□ -0.6
TRERF1-203ENST00000372917 SLC29A2Q14542 456 aa11.32□□□□□ -0.6
TRERF1-203ENST00000372917 ZNF790Q6PG37 636 aa11.32□□□□□ -0.6
TRERF1-203ENST00000372917 CABLES1Q8TDN4 633 aa11.32□□□□□ -0.6
TRERF1-203ENST00000372917 CELF4Q9BZC1 486 aaKnown RBP11.32□□□□□ -0.6
TRERF1-203ENST00000372917 SIAEQ9HAT2 523 aa11.32□□□□□ -0.6
TRERF1-203ENST00000372917 DDX56Q9NY93 547 aaKnown RBP11.32□□□□□ -0.6
TRERF1-203ENST00000372917 CYTH3O43739 400 aa11.32□□□□□ -0.6
TRERF1-203ENST00000372917 RGPD1P0DJD0 1748 aa11.32□□□□□ -0.6
TRERF1-203ENST00000372917 ATF3P18847 181 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms