RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 SFNP31947 248 aa9.07□□□□□ -0.96
MRPL55-211ENST00000366738 CCT6AP40227 531 aaKnown RBP9.07□□□□□ -0.96
MRPL55-211ENST00000366738 GPC3P51654 580 aa9.07□□□□□ -0.96
MRPL55-211ENST00000366738 NDUFA8P51970 172 aa9.07□□□□□ -0.96
MRPL55-211ENST00000366738 UBE2HP62256 183 aa9.07□□□□□ -0.96
MRPL55-211ENST00000366738 PDIA5Q14554 519 aa9.07□□□□□ -0.96
MRPL55-211ENST00000366738 SMC1AQ14683 1233 aaKnown RBP9.07□□□□□ -0.96
MRPL55-211ENST00000366738 EPHA7Q15375 998 aa9.07□□□□□ -0.96
MRPL55-211ENST00000366738 TMEM119Q4V9L6 283 aa9.07□□□□□ -0.96
MRPL55-211ENST00000366738 CLLU1OSQ5K130 101 aa9.07□□□□□ -0.96
MRPL55-211ENST00000366738 KRT79Q5XKE5 535 aa9.07□□□□□ -0.96
MRPL55-211ENST00000366738 HAUS3Q68CZ6 603 aa9.07□□□□□ -0.96
MRPL55-211ENST00000366738 ZNF598Q86UK7 904 aaKnown RBP9.07□□□□□ -0.96
MRPL55-211ENST00000366738 CATSPER3Q86XQ3 398 aa9.07□□□□□ -0.96
MRPL55-211ENST00000366738 PDILTQ8N807 584 aa9.07□□□□□ -0.96
MRPL55-211ENST00000366738 GPT2Q8TD30 523 aa9.07□□□□□ -0.96
MRPL55-211ENST00000366738 AUTS2Q8WXX7 1259 aa9.07□□□□□ -0.96
MRPL55-211ENST00000366738 AK8Q96MA6 479 aa9.07□□□□□ -0.96
MRPL55-211ENST00000366738 ZNF558Q96NG5 402 aa9.07□□□□□ -0.96
MRPL55-211ENST00000366738 HSD17B14Q9BPX1 270 aa9.07□□□□□ -0.96
MRPL55-211ENST00000366738 RTP3Q9BQQ7 232 aa9.07□□□□□ -0.96
MRPL55-211ENST00000366738 RAB34Q9BZG1 259 aa9.07□□□□□ -0.96
MRPL55-211ENST00000366738 CCSER1Q9C0I3 900 aa9.07□□□□□ -0.96
MRPL55-211ENST00000366738 ELAC1Q9H777 363 aaKnown RBP9.07□□□□□ -0.96
MRPL55-211ENST00000366738 DLL3Q9NYJ7 618 aa9.07□□□□□ -0.96
MRPL55-211ENST00000366738 AKT3Q9Y243 479 aa9.07□□□□□ -0.96
MRPL55-211ENST00000366738 CACNA1IQ9P0X4 2223 aa9.07□□□□□ -0.96
MRPL55-211ENST00000366738 IGKV6-21A0A0C4DH24 114 aa9.06□□□□□ -0.96
MRPL55-211ENST00000366738 FAM237AA0A1B0GTK4 181 aa9.06□□□□□ -0.96
MRPL55-211ENST00000366738 MEIS3P2A8K0S8 358 aa9.06□□□□□ -0.96
MRPL55-211ENST00000366738 MAGEB2O15479 319 aa9.06□□□□□ -0.96
MRPL55-211ENST00000366738 NR1I2O75469 434 aa9.06□□□□□ -0.96
MRPL55-211ENST00000366738 SLITRK3O94933 977 aa9.06□□□□□ -0.96
MRPL55-211ENST00000366738 P4HBP07237 508 aaKnown RBP9.06□□□□□ -0.96
MRPL55-211ENST00000366738 DARSP14868 501 aaKnown RBP9.06□□□□□ -0.96
MRPL55-211ENST00000366738 CMA1P23946 247 aa9.06□□□□□ -0.96
MRPL55-211ENST00000366738 RPA1P27694 616 aa9.06□□□□□ -0.96
MRPL55-211ENST00000366738 PPM1AP35813 382 aa9.06□□□□□ -0.96
MRPL55-211ENST00000366738 UBA7P41226 1012 aa9.06□□□□□ -0.96
MRPL55-211ENST00000366738 KRT17Q04695 432 aa9.06□□□□□ -0.96
MRPL55-211ENST00000366738 SNW1Q13573 536 aaKnown RBP9.06□□□□□ -0.96
MRPL55-211ENST00000366738 NFKBIBQ15653 356 aa9.06□□□□□ -0.96
MRPL55-211ENST00000366738 E2F4Q16254 413 aa9.06□□□□□ -0.96
MRPL55-211ENST00000366738 RSPO4Q2I0M5 234 aaPredicted RBP9.06□□□□□ -0.96
MRPL55-211ENST00000366738 ATAT1Q5SQI0 421 aa9.06□□□□□ -0.96
MRPL55-211ENST00000366738 HYIQ5T013 277 aa9.06□□□□□ -0.96
MRPL55-211ENST00000366738 PLA2G4FQ68DD2 849 aa9.06□□□□□ -0.96
MRPL55-211ENST00000366738 TMC5Q6UXY8 1006 aa9.06□□□□□ -0.96
MRPL55-211ENST00000366738 ECHDC2Q86YB7 292 aa9.06□□□□□ -0.96
MRPL55-211ENST00000366738 TPH2Q8IWU9 490 aa9.06□□□□□ -0.96
MRPL55-211ENST00000366738 LRRC43Q8N309 656 aa9.06□□□□□ -0.96
MRPL55-211ENST00000366738 PLCD3Q8N3E9 789 aa9.06□□□□□ -0.96
MRPL55-211ENST00000366738 MRPL43Q8N983 215 aaKnown RBP9.06□□□□□ -0.96
MRPL55-211ENST00000366738 RDM1Q8NG50 284 aa9.06□□□□□ -0.96
MRPL55-211ENST00000366738 RASSF8Q8NHQ8 419 aa9.06□□□□□ -0.96
MRPL55-211ENST00000366738 ERMNQ8TAM6 284 aa9.06□□□□□ -0.96
MRPL55-211ENST00000366738 DHX58Q96C10 678 aa9.06□□□□□ -0.96
MRPL55-211ENST00000366738 POLR3CQ9BUI4 534 aaPredicted RBP9.06□□□□□ -0.96
MRPL55-211ENST00000366738 PANK2Q9BZ23 570 aa9.06□□□□□ -0.96
MRPL55-211ENST00000366738 TMEM117Q9H0C3 514 aa9.06□□□□□ -0.96
MRPL55-211ENST00000366738 TUFT1Q9NNX1 390 aa9.06□□□□□ -0.96
MRPL55-211ENST00000366738 CYP26B1Q9NR63 512 aa9.06□□□□□ -0.96
MRPL55-211ENST00000366738 BLOC1S4Q9NUP1 217 aa9.06□□□□□ -0.96
MRPL55-211ENST00000366738 DDX19AQ9NUU7 478 aaKnown RBP9.06□□□□□ -0.96
MRPL55-211ENST00000366738 DUSP12Q9UNI6 340 aa9.06□□□□□ -0.96
MRPL55-211ENST00000366738 USTQ9Y2C2 406 aa9.06□□□□□ -0.96
MRPL55-211ENST00000366738 FANCMQ8IYD8 2048 aa9.05□□□□□ -0.96
MRPL55-211ENST00000366738 FAM208BQ5VWN6 2430 aa9.05□□□□□ -0.96
MRPL55-211ENST00000366738 C2orf16Q68DN1 1984 aa9.05□□□□□ -0.96
MRPL55-211ENST00000366738 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.05□□□□□ -0.96
MRPL55-211ENST00000366738 KRBA1A5PL33 1030 aa9.05□□□□□ -0.96
MRPL55-211ENST00000366738 GOLGA6L4A6NEF3 574 aa9.05□□□□□ -0.96
MRPL55-211ENST00000366738 DDX11L8A8MPP1 907 aa9.05□□□□□ -0.96
MRPL55-211ENST00000366738 NT5C1B-RDH14C9J2C7 533 aa9.05□□□□□ -0.96
MRPL55-211ENST00000366738 E9PMD0 336 aa9.05□□□□□ -0.96
MRPL55-211ENST00000366738 GOLGA6L22H0YM25 854 aa9.05□□□□□ -0.96
MRPL55-211ENST00000366738 POLR2DO15514 142 aaKnown RBP9.05□□□□□ -0.96
MRPL55-211ENST00000366738 ACTN4O43707 911 aaKnown RBP9.05□□□□□ -0.96
MRPL55-211ENST00000366738 B4GALT3O60512 393 aa9.05□□□□□ -0.96
MRPL55-211ENST00000366738 CFHP08603 1231 aa9.05□□□□□ -0.96
MRPL55-211ENST00000366738 TXLNAP40222 546 aa9.05□□□□□ -0.96
MRPL55-211ENST00000366738 QARSP47897 775 aaKnown RBP9.05□□□□□ -0.96
MRPL55-211ENST00000366738 PSMC5P62195 406 aa9.05□□□□□ -0.96
MRPL55-211ENST00000366738 TDGQ13569 410 aa9.05□□□□□ -0.96
MRPL55-211ENST00000366738 MTERF2Q49AM1 385 aa9.05□□□□□ -0.96
MRPL55-211ENST00000366738 ANO5Q75V66 913 aa9.05□□□□□ -0.96
MRPL55-211ENST00000366738 TMEM173Q86WV6 379 aaPredicted RBP9.05□□□□□ -0.96
MRPL55-211ENST00000366738 KSR1Q8IVT5 923 aa9.05□□□□□ -0.96
MRPL55-211ENST00000366738 GRAMD1CQ8IYS0 662 aa9.05□□□□□ -0.96
MRPL55-211ENST00000366738 FMR1NBQ8N0W7 255 aaPredicted RBP9.05□□□□□ -0.96
MRPL55-211ENST00000366738 SLC39A11Q8N1S5 342 aa9.05□□□□□ -0.96
MRPL55-211ENST00000366738 RNF169Q8NCN4 708 aa9.05□□□□□ -0.96
MRPL55-211ENST00000366738 ENGASEQ8NFI3 743 aa9.05□□□□□ -0.96
MRPL55-211ENST00000366738 HELQQ8TDG4 1101 aa9.05□□□□□ -0.96
MRPL55-211ENST00000366738 PIGOQ8TEQ8 1089 aa9.05□□□□□ -0.96
MRPL55-211ENST00000366738 FAM167AQ96KS9 214 aa9.05□□□□□ -0.96
MRPL55-211ENST00000366738 MTRQ99707 1265 aa9.05□□□□□ -0.96
MRPL55-211ENST00000366738 NIFKQ9BYG3 293 aaKnown RBP9.05□□□□□ -0.96
MRPL55-211ENST00000366738 SEMA4AQ9H3S1 761 aa9.05□□□□□ -0.96
MRPL55-211ENST00000366738 KCNK12Q9HB15 430 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms