RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 ARHGEF19Q8IW93 802 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 VPS52Q8N1B4 723 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 MREGQ8N565 214 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 FBXL13Q8NEE6 735 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 SCFD2Q8WU76 684 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 DHX38Q92620 1227 aaKnown RBP7.3□□□□□ -1.24
RTN4-203ENST00000357376 STMN2Q93045 179 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 MASTLQ96GX5 879 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 C4AP0C0L4 1744 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 C4BP0C0L5 1744 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 A0A0A6YYK5 440 aaPredicted RBP7.3□□□□□ -1.24
RTN4-203ENST00000357376 C21orf2O43822 256 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 SLITRK3O94933 977 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 CALCAP01258 141 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 ANKRD20A8PQ5CZ79 823 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 IZUMO3Q5VZ72 239 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 PPP1R21Q6ZMI0 780 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 CYFIP1Q7L576 1253 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 AMIGO3Q86WK7 504 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 ATP8B4Q8TF62 1192 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 FAM163AQ96GL9 167 aaPredicted RBP7.3□□□□□ -1.24
RTN4-203ENST00000357376 SNF8Q96H20 258 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 AGBL1Q96MI9 1066 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 RMDN3Q96TC7 470 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 OLFML3Q9NRN5 406 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.3□□□□□ -1.24
RTN4-203ENST00000357376 AJAP1Q9UKB5 411 aaPredicted RBP7.3□□□□□ -1.24
RTN4-203ENST00000357376 MYH10P35580 1976 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 ROBO3Q96MS0 1386 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 GAKO14976 1311 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 NUP188Q5SRE5 1749 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 TROVE2P10155 538 aaKnown RBP eCLIP7.29□□□□□ -1.24
RTN4-203ENST00000357376 PYGMP11217 842 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 PLS3P13797 630 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 PRKCIP41743 596 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 ITGA8P53708 1063 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 APOBEC3HQ6NTF7 200 aaKnown RBP7.29□□□□□ -1.24
RTN4-203ENST00000357376 SPATA21Q7Z572 469 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 PALB2Q86YC2 1186 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 CD302Q8IX05 232 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 BBOF1Q8ND07 529 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 ALG3Q92685 438 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 RAB3IPQ96QF0 476 aaPredicted RBP7.29□□□□□ -1.24
RTN4-203ENST00000357376 FAM167BQ9BTA0 163 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 DDX23Q9BUQ8 820 aaKnown RBP7.29□□□□□ -1.24
RTN4-203ENST00000357376 FAM129AQ9BZQ8 928 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 ERVK-5Q9HDB9 667 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 TOPORSQ9NS56 1045 aaPredicted RBP7.29□□□□□ -1.24
RTN4-203ENST00000357376 ZNF142P52746 1687 aaPredicted RBP7.29□□□□□ -1.24
RTN4-203ENST00000357376 LAMB4A4D0S4 1761 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 OPLAHO14841 1288 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 TGFB1I1O43294 461 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 RFX1P22670 979 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 CHRNA5P30532 468 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 BPIFB4P59827 614 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 OSTNP61366 133 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 ALCAMQ13740 583 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 BBS9Q3SYG4 887 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 Q4G0T1 1027 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 C6orf163Q5TEZ5 329 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 SEPT14Q6ZU15 432 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 CEP128Q6ZU80 1094 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 ZBTB33Q86T24 672 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 CNPY4Q8N129 248 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 C4orf33Q8N1A6 199 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 CFAP57Q96MR6 1250 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 SLC24A3Q9HC58 644 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 KCNH7Q9NS40 1196 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 DCTN4Q9UJW0 460 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 USP15Q9Y4E8 981 aaPredicted RBP7.29□□□□□ -1.24
RTN4-203ENST00000357376 GJA3Q9Y6H8 435 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 TRPM3Q9HCF6 1732 aaPredicted RBP7.29□□□□□ -1.24
RTN4-203ENST00000357376 IGSF9BQ9UPX0 1349 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 FSBPO95073 299 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 BASP1P80723 227 aaKnown RBP7.29□□□□□ -1.24
RTN4-203ENST00000357376 VPS72Q15906 364 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 PHLDB3Q6NSJ2 640 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 DNAJC24Q6P3W2 148 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 MOXD1Q6UVY6 613 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 SUPT20HQ8NEM7 779 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 ETNPPLQ8TBG4 499 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 P3H4Q92791 437 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 CDC42EP4Q9H3Q1 356 aaKnown RBP7.29□□□□□ -1.24
RTN4-203ENST00000357376 NOP53Q9NZM5 478 aaKnown RBP7.29□□□□□ -1.24
RTN4-203ENST00000357376 MYH6P13533 1939 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 PHRF1Q9P1Y6 1649 aaKnown RBP7.29□□□□□ -1.24
RTN4-203ENST00000357376 GTPBP10A4D1E9 387 aaKnown RBP7.29□□□□□ -1.24
RTN4-203ENST00000357376 TLR3O15455 904 aaKnown RBP7.29□□□□□ -1.24
RTN4-203ENST00000357376 DKC1O60832 514 aaKnown RBP eCLIP7.29□□□□□ -1.24
RTN4-203ENST00000357376 ELF1P32519 619 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 ACOT2P49753 483 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 YWHAGP61981 247 aaKnown RBP eCLIP7.29□□□□□ -1.24
RTN4-203ENST00000357376 GPS1Q13098 491 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 TAF11Q15544 211 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 MUM1Q2TAK8 710 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 SYCP2LQ5T4T6 812 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 CCDC62Q6P9F0 684 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 OTOP1Q7RTM1 612 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 RPAINQ86UA6 219 aa7.29□□□□□ -1.24
RTN4-203ENST00000357376 FAM160B2Q86V87 743 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms