RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 RBSNQ9H1K0 784 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 SNTG2Q9NY99 539 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 CTNND2Q9UQB3 1225 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 STYXL1Q9Y6J8 313 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 TTC3P53804 2025 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 PTPRSQ13332 1948 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 SMC2O95347 1197 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 NPTXRO95502 500 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 PHKA2P46019 1235 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 CYP2J2P51589 502 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 PSMD2Q13200 908 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 SHHQ15465 462 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 TMEM132AQ24JP5 1023 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 SKOR2Q2VWA4 1001 aaPredicted RBP4.41□□□□□ -1.7
LIG4-201ENST00000356922 SLC10A6Q3KNW5 377 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 SRGAP1Q7Z6B7 1085 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 ZNF516Q92618 1163 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 KCNN1Q92952 543 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 FANCLQ9NW38 375 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 SEL1LQ9UBV2 794 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 COL4A6Q14031 1691 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 CNTNAP2Q9UHC6 1331 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 LTBP2Q14767 1821 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 SPDYE4A6NLX3 237 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 C9IYK1 514 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 UPP2O95045 317 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 GUCY2FP51841 1108 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 APBA1Q02410 837 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 PAK2Q13177 524 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 BFSP2Q13515 415 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 APTXQ7Z2E3 356 aaKnown RBP4.41□□□□□ -1.7
LIG4-201ENST00000356922 ZNF598Q86UK7 904 aaKnown RBP4.41□□□□□ -1.7
LIG4-201ENST00000356922 FAM213AQ9BRX8 229 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 APOL6Q9BWW8 343 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 LRRC27Q9C0I9 530 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 GBP3Q9H0R5 595 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 CBX8Q9HC52 389 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 TOPORSQ9NS56 1045 aaPredicted RBP4.41□□□□□ -1.7
LIG4-201ENST00000356922 TRAF3IP3Q9Y228 551 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 IPPQ9Y573 584 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 PCDHB2Q9Y5E7 798 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 PCDHB13Q9Y5F0 798 aa4.41□□□□□ -1.7
LIG4-201ENST00000356922 MYO15AQ9UKN7 3530 aa4.4□□□□□ -1.7
LIG4-201ENST00000356922 TLR3O15455 904 aaKnown RBP4.4□□□□□ -1.7
LIG4-201ENST00000356922 CLDN3O15551 220 aa4.4□□□□□ -1.7
LIG4-201ENST00000356922 TOM1L1O75674 476 aa4.4□□□□□ -1.7
LIG4-201ENST00000356922 PIGRP01833 764 aa4.4□□□□□ -1.7
LIG4-201ENST00000356922 CXCL8P10145 99 aa4.4□□□□□ -1.7
LIG4-201ENST00000356922 PBX3P40426 434 aa4.4□□□□□ -1.7
LIG4-201ENST00000356922 EFNA5P52803 228 aa4.4□□□□□ -1.7
LIG4-201ENST00000356922 FAM189BP81408 668 aa4.4□□□□□ -1.7
LIG4-201ENST00000356922 MCL1Q07820 350 aa4.4□□□□□ -1.7
LIG4-201ENST00000356922 TFDP1Q14186 410 aa4.4□□□□□ -1.7
LIG4-201ENST00000356922 PPP2R5AQ15172 486 aa4.4□□□□□ -1.7
LIG4-201ENST00000356922 ENOX2Q16206 610 aaKnown RBP4.4□□□□□ -1.7
LIG4-201ENST00000356922 COBLL1Q53SF7 1204 aa4.4□□□□□ -1.7
LIG4-201ENST00000356922 GLRA4Q5JXX5 417 aa4.4□□□□□ -1.7
LIG4-201ENST00000356922 CLLU1OSQ5K130 101 aa4.4□□□□□ -1.7
LIG4-201ENST00000356922 TWF2Q6IBS0 349 aaKnown RBP4.4□□□□□ -1.7
LIG4-201ENST00000356922 RSPH3Q86UC2 560 aa4.4□□□□□ -1.7
LIG4-201ENST00000356922 EXOC8Q8IYI6 725 aa4.4□□□□□ -1.7
LIG4-201ENST00000356922 RNF169Q8NCN4 708 aa4.4□□□□□ -1.7
LIG4-201ENST00000356922 NOC3LQ8WTT2 800 aaKnown RBP4.4□□□□□ -1.7
LIG4-201ENST00000356922 P2RX5Q93086 422 aa4.4□□□□□ -1.7
LIG4-201ENST00000356922 ACCSQ96QU6 501 aa4.4□□□□□ -1.7
LIG4-201ENST00000356922 TCHPQ9BT92 498 aa4.4□□□□□ -1.7
LIG4-201ENST00000356922 SRRTQ9BXP5 876 aaKnown RBP4.4□□□□□ -1.7
LIG4-201ENST00000356922 GOLGA2P5Q9HBQ8 144 aa4.4□□□□□ -1.7
LIG4-201ENST00000356922 PDE11AQ9HCR9 933 aa4.4□□□□□ -1.7
LIG4-201ENST00000356922 FAM105AQ9NUU6 356 aa4.4□□□□□ -1.7
LIG4-201ENST00000356922 HSPBP1Q9NZL4 362 aa4.4□□□□□ -1.7
LIG4-201ENST00000356922 TNFSF13BQ9Y275 285 aa4.4□□□□□ -1.7
LIG4-201ENST00000356922 PHLPP2Q6ZVD8 1323 aa4.4□□□□□ -1.7
LIG4-201ENST00000356922 A0A0U1RQF3 1178 aa4.4□□□□□ -1.71
LIG4-201ENST00000356922 LCHNA4D1U4 455 aa4.4□□□□□ -1.71
LIG4-201ENST00000356922 PTGESO14684 152 aa4.4□□□□□ -1.71
LIG4-201ENST00000356922 EIF3DO15371 548 aaKnown RBP eCLIP4.4□□□□□ -1.71
LIG4-201ENST00000356922 ERLIN2O94905 339 aa4.4□□□□□ -1.71
LIG4-201ENST00000356922 STAG3L1P0CL83 205 aa4.4□□□□□ -1.71
LIG4-201ENST00000356922 CCNE1P24864 410 aa4.4□□□□□ -1.71
LIG4-201ENST00000356922 LIG4P49917 911 aa4.4□□□□□ -1.71
LIG4-201ENST00000356922 CDR1P51861 262 aa4.4□□□□□ -1.71
LIG4-201ENST00000356922 RABGGTBP53611 331 aa4.4□□□□□ -1.71
LIG4-201ENST00000356922 ZNF445P59923 1031 aa4.4□□□□□ -1.71
LIG4-201ENST00000356922 SOX4Q06945 474 aaPredicted RBP4.4□□□□□ -1.71
LIG4-201ENST00000356922 ADAM9Q13443 819 aa4.4□□□□□ -1.71
LIG4-201ENST00000356922 NAB2Q15742 525 aa4.4□□□□□ -1.71
LIG4-201ENST00000356922 SASS6Q6UVJ0 657 aa4.4□□□□□ -1.71
LIG4-201ENST00000356922 LRSAM1Q6UWE0 723 aa4.4□□□□□ -1.71
LIG4-201ENST00000356922 ALKAL1Q6UXT8 129 aa4.4□□□□□ -1.71
LIG4-201ENST00000356922 ZNF280BQ86YH2 543 aa4.4□□□□□ -1.71
LIG4-201ENST00000356922 ZBTB8OSQ8IWT0 167 aa4.4□□□□□ -1.71
LIG4-201ENST00000356922 SYCP3Q8IZU3 236 aa4.4□□□□□ -1.71
LIG4-201ENST00000356922 AOPEPQ8N6M6 819 aa4.4□□□□□ -1.71
LIG4-201ENST00000356922 OR5B17Q8NGF7 314 aa4.4□□□□□ -1.71
LIG4-201ENST00000356922 POMGNT1Q8WZA1 660 aa4.4□□□□□ -1.71
LIG4-201ENST00000356922 C18orf25Q96B23 403 aaPredicted RBP4.4□□□□□ -1.71
LIG4-201ENST00000356922 FBXL18Q96ME1 805 aa4.4□□□□□ -1.71
LIG4-201ENST00000356922 GDF15Q99988 308 aa4.4□□□□□ -1.71
LIG4-201ENST00000356922 MRPL4Q9BYD3 311 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms