RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 TTI1O43156 1089 aa23.98■■□□□ 1.43
NKX2-1-201ENST00000354822 CHRNB2P17787 502 aa23.98■■□□□ 1.43
NKX2-1-201ENST00000354822 POMGNT1Q8WZA1 660 aa23.98■■□□□ 1.43
NKX2-1-201ENST00000354822 SAAL1Q96ER3 474 aa23.98■■□□□ 1.43
NKX2-1-201ENST00000354822 PDLIM7Q9NR12 457 aa23.98■■□□□ 1.43
NKX2-1-201ENST00000354822 RAB20Q9NX57 234 aa23.98■■□□□ 1.43
NKX2-1-201ENST00000354822 PLAAQ9Y263 795 aa23.98■■□□□ 1.43
NKX2-1-201ENST00000354822 PARP14Q460N5 1801 aa23.97■■□□□ 1.43
NKX2-1-201ENST00000354822 CYP26A1O43174 497 aa23.97■■□□□ 1.43
NKX2-1-201ENST00000354822 ZNF862O60290 1169 aa23.97■■□□□ 1.43
NKX2-1-201ENST00000354822 STBD1O95210 358 aa23.97■■□□□ 1.43
NKX2-1-201ENST00000354822 ANGEL2Q5VTE6 544 aaKnown RBP23.97■■□□□ 1.43
NKX2-1-201ENST00000354822 ENOSF1Q7L5Y1 443 aa23.97■■□□□ 1.43
NKX2-1-201ENST00000354822 NOP9Q86U38 636 aaKnown RBP23.97■■□□□ 1.43
NKX2-1-201ENST00000354822 SEMA4DQ92854 862 aa23.97■■□□□ 1.43
NKX2-1-201ENST00000354822 KAT5Q92993 513 aa23.97■■□□□ 1.43
NKX2-1-201ENST00000354822 IFT74Q96LB3 600 aa23.97■■□□□ 1.43
NKX2-1-201ENST00000354822 PCDHB18PQ96TA0 734 aa23.97■■□□□ 1.43
NKX2-1-201ENST00000354822 WNT8AQ9H1J5 351 aa23.97■■□□□ 1.43
NKX2-1-201ENST00000354822 JPH1Q9HDC5 661 aaPredicted RBP23.97■■□□□ 1.43
NKX2-1-201ENST00000354822 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.97■■□□□ 1.43
NKX2-1-201ENST00000354822 ZNF214Q9UL59 606 aaPredicted RBP23.97■■□□□ 1.43
NKX2-1-201ENST00000354822 FAM187AA6NFU0 413 aa23.96■■□□□ 1.43
NKX2-1-201ENST00000354822 TULP2O00295 520 aa23.96■■□□□ 1.43
NKX2-1-201ENST00000354822 DAPK3O43293 454 aa23.96■■□□□ 1.43
NKX2-1-201ENST00000354822 GGPS1O95749 300 aa23.96■■□□□ 1.43
NKX2-1-201ENST00000354822 HSD17B3P37058 310 aa23.96■■□□□ 1.43
NKX2-1-201ENST00000354822 CYP24A1Q07973 514 aa23.96■■□□□ 1.43
NKX2-1-201ENST00000354822 DHX34Q14147 1143 aaKnown RBP23.96■■□□□ 1.43
NKX2-1-201ENST00000354822 GNPTABQ3T906 1256 aa23.96■■□□□ 1.43
NKX2-1-201ENST00000354822 SWSAP1Q6NVH7 229 aa23.96■■□□□ 1.43
NKX2-1-201ENST00000354822 KDM7AQ6ZMT4 941 aa23.96■■□□□ 1.43
NKX2-1-201ENST00000354822 DDX42Q86XP3 938 aaKnown RBP eCLIP23.96■■□□□ 1.43
NKX2-1-201ENST00000354822 GPD1LQ8N335 351 aa23.96■■□□□ 1.43
NKX2-1-201ENST00000354822 HELQQ8TDG4 1101 aa23.96■■□□□ 1.43
NKX2-1-201ENST00000354822 WRNIP1Q96S55 665 aa23.96■■□□□ 1.43
NKX2-1-201ENST00000354822 SLC9A2Q9UBY0 812 aa23.96■■□□□ 1.43
NKX2-1-201ENST00000354822 EIF3HO15372 352 aaKnown RBP eCLIP23.96■■□□□ 1.43
NKX2-1-201ENST00000354822 SCP2P22307 547 aa23.96■■□□□ 1.43
NKX2-1-201ENST00000354822 BSNDQ8WZ55 320 aa23.96■■□□□ 1.43
NKX2-1-201ENST00000354822 ATP6V1G3Q96LB4 118 aa23.96■■□□□ 1.43
NKX2-1-201ENST00000354822 KIFC3Q9BVG8 833 aa23.96■■□□□ 1.43
NKX2-1-201ENST00000354822 TEX13BQ9BXU2 312 aa23.96■■□□□ 1.43
NKX2-1-201ENST00000354822 KIAA1586Q9HCI6 787 aa23.96■■□□□ 1.43
NKX2-1-201ENST00000354822 ZC3H11AO75152 810 aaKnown RBP eCLIP23.95■■□□□ 1.42
NKX2-1-201ENST00000354822 CYP11B1P15538 503 aa23.95■■□□□ 1.42
NKX2-1-201ENST00000354822 PDE6CP51160 858 aa23.95■■□□□ 1.42
NKX2-1-201ENST00000354822 CDR2Q01850 454 aa23.95■■□□□ 1.42
NKX2-1-201ENST00000354822 ZKSCAN4Q969J2 545 aaPredicted RBP23.95■■□□□ 1.42
NKX2-1-201ENST00000354822 ACAD9Q9H845 621 aa23.95■■□□□ 1.42
NKX2-1-201ENST00000354822 ATP6V0A4Q9HBG4 840 aa23.95■■□□□ 1.42
NKX2-1-201ENST00000354822 GNGT1P63211 74 aa23.95■■□□□ 1.42
NKX2-1-201ENST00000354822 DR1Q01658 176 aa23.95■■□□□ 1.42
NKX2-1-201ENST00000354822 SPDYCQ5MJ68 293 aa23.95■■□□□ 1.42
NKX2-1-201ENST00000354822 MIS18BP1Q6P0N0 1132 aa23.95■■□□□ 1.42
NKX2-1-201ENST00000354822 SLC39A4Q6P5W5 647 aa23.95■■□□□ 1.42
NKX2-1-201ENST00000354822 SLC47A2Q86VL8 602 aa23.95■■□□□ 1.42
NKX2-1-201ENST00000354822 NLGN2Q8NFZ4 835 aa23.95■■□□□ 1.42
NKX2-1-201ENST00000354822 ALG3Q92685 438 aa23.95■■□□□ 1.42
NKX2-1-201ENST00000354822 ZSWIM1Q9BR11 485 aa23.95■■□□□ 1.42
NKX2-1-201ENST00000354822 CYP26B1Q9NR63 512 aa23.95■■□□□ 1.42
NKX2-1-201ENST00000354822 CYP39A1Q9NYL5 469 aa23.95■■□□□ 1.42
NKX2-1-201ENST00000354822 UVRAGQ9P2Y5 699 aa23.95■■□□□ 1.42
NKX2-1-201ENST00000354822 SPATA31C2B4DYI2 1134 aa23.94■■□□□ 1.42
NKX2-1-201ENST00000354822 RGS20O76081 388 aa23.94■■□□□ 1.42
NKX2-1-201ENST00000354822 CYP1A2P05177 515 aa23.94■■□□□ 1.42
NKX2-1-201ENST00000354822 HMGCS2P54868 508 aa23.94■■□□□ 1.42
NKX2-1-201ENST00000354822 DRG2P55039 364 aaKnown RBP23.94■■□□□ 1.42
NKX2-1-201ENST00000354822 FMO1Q01740 532 aa23.94■■□□□ 1.42
NKX2-1-201ENST00000354822 TMEM132BQ14DG7 1078 aa23.94■■□□□ 1.42
NKX2-1-201ENST00000354822 CEP85LQ5SZL2 805 aa23.94■■□□□ 1.42
NKX2-1-201ENST00000354822 KCTD16Q68DU8 428 aa23.94■■□□□ 1.42
NKX2-1-201ENST00000354822 ABHD15Q6UXT9 468 aa23.94■■□□□ 1.42
NKX2-1-201ENST00000354822 RUFY4Q6ZNE9 571 aa23.94■■□□□ 1.42
NKX2-1-201ENST00000354822 SRLQ86TD4 932 aa23.94■■□□□ 1.42
NKX2-1-201ENST00000354822 EFCAB13Q8IY85 973 aa23.94■■□□□ 1.42
NKX2-1-201ENST00000354822 TMBIM4Q9HC24 238 aa23.94■■□□□ 1.42
NKX2-1-201ENST00000354822 HOXC10Q9NYD6 342 aa23.94■■□□□ 1.42
NKX2-1-201ENST00000354822 GTF3C4Q9UKN8 822 aa23.94■■□□□ 1.42
NKX2-1-201ENST00000354822 HNRNPDLO14979 420 aaKnown RBP23.93■■□□□ 1.42
NKX2-1-201ENST00000354822 ERLIN2O94905 339 aa23.93■■□□□ 1.42
NKX2-1-201ENST00000354822 MYZAPP0CAP1 466 aa23.93■■□□□ 1.42
NKX2-1-201ENST00000354822 XKR3Q5GH77 459 aa23.93■■□□□ 1.42
NKX2-1-201ENST00000354822 CATSPERGQ6ZRH7 1159 aa23.93■■□□□ 1.42
NKX2-1-201ENST00000354822 SV2AQ7L0J3 742 aa23.93■■□□□ 1.42
NKX2-1-201ENST00000354822 TRPM4Q8TD43 1214 aa23.93■■□□□ 1.42
NKX2-1-201ENST00000354822 POP1Q99575 1024 aaKnown RBP23.93■■□□□ 1.42
NKX2-1-201ENST00000354822 ERP44Q9BS26 406 aa23.93■■□□□ 1.42
NKX2-1-201ENST00000354822 CELF4Q9BZC1 486 aaKnown RBP23.93■■□□□ 1.42
NKX2-1-201ENST00000354822 NEUROG2Q9H2A3 272 aa23.93■■□□□ 1.42
NKX2-1-201ENST00000354822 SEPT9Q9UHD8 586 aaPredicted RBP23.93■■□□□ 1.42
NKX2-1-201ENST00000354822 RSPH14Q9UHP6 348 aa23.93■■□□□ 1.42
NKX2-1-201ENST00000354822 RASAL2Q9UJF2 1139 aa23.93■■□□□ 1.42
NKX2-1-201ENST00000354822 MMEP08473 750 aa23.93■■□□□ 1.42
NKX2-1-201ENST00000354822 CTNNA1P35221 906 aaKnown RBP23.93■■□□□ 1.42
NKX2-1-201ENST00000354822 ACTR2P61160 394 aa23.93■■□□□ 1.42
NKX2-1-201ENST00000354822 GCNT1Q02742 428 aa23.93■■□□□ 1.42
NKX2-1-201ENST00000354822 FOXR1Q6PIV2 292 aa23.93■■□□□ 1.42
NKX2-1-201ENST00000354822 TAS1R2Q8TE23 839 aa23.93■■□□□ 1.42
NKX2-1-201ENST00000354822 GPRC5DQ9NZD1 345 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms