RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 SHCBP1Q8NEM2 672 aa12.99□□□□□ -0.33
SMAD9-201ENST00000350148 FHDC1Q9C0D6 1143 aaPredicted RBP12.99□□□□□ -0.33
SMAD9-201ENST00000350148 NACA2Q9H009 215 aa12.99□□□□□ -0.33
SMAD9-201ENST00000350148 BLOC1S4Q9NUP1 217 aa12.99□□□□□ -0.33
SMAD9-201ENST00000350148 ASNSD1Q9NWL6 643 aa12.99□□□□□ -0.33
SMAD9-201ENST00000350148 DONSONQ9NYP3 566 aa12.99□□□□□ -0.33
SMAD9-201ENST00000350148 PLAGL2Q9UPG8 496 aa12.99□□□□□ -0.33
SMAD9-201ENST00000350148 NUP98P52948 1817 aa12.99□□□□□ -0.33
SMAD9-201ENST00000350148 SLMAPQ14BN4 828 aa12.99□□□□□ -0.33
SMAD9-201ENST00000350148 SPOUT1Q5T280 376 aaKnown RBP12.99□□□□□ -0.33
SMAD9-201ENST00000350148 E4F1Q66K89 784 aaPredicted RBP12.99□□□□□ -0.33
SMAD9-201ENST00000350148 ZNF384Q8TF68 577 aa12.99□□□□□ -0.33
SMAD9-201ENST00000350148 SEMA6BQ9H3T3 888 aa12.99□□□□□ -0.33
SMAD9-201ENST00000350148 DDX56Q9NY93 547 aaKnown RBP12.99□□□□□ -0.33
SMAD9-201ENST00000350148 ZNF148Q9UQR1 794 aa12.99□□□□□ -0.33
SMAD9-201ENST00000350148 SLITRK3O94933 977 aa12.99□□□□□ -0.33
SMAD9-201ENST00000350148 CD4P01730 458 aa12.99□□□□□ -0.33
SMAD9-201ENST00000350148 INHBEP58166 350 aa12.99□□□□□ -0.33
SMAD9-201ENST00000350148 GUCY2DQ02846 1103 aa12.99□□□□□ -0.33
SMAD9-201ENST00000350148 TWF2Q6IBS0 349 aaKnown RBP12.99□□□□□ -0.33
SMAD9-201ENST00000350148 OR6B2Q6IFH4 312 aa12.99□□□□□ -0.33
SMAD9-201ENST00000350148 MICAL1Q8TDZ2 1067 aa12.99□□□□□ -0.33
SMAD9-201ENST00000350148 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.99□□□□□ -0.331e-6■■■■■ 56.2
SMAD9-201ENST00000350148 PSMD10O75832 226 aa12.99□□□□□ -0.33
SMAD9-201ENST00000350148 HEXIM1O94992 359 aaKnown RBP12.99□□□□□ -0.33
SMAD9-201ENST00000350148 CTNNA1P35221 906 aaKnown RBP12.99□□□□□ -0.33
SMAD9-201ENST00000350148 PCK1P35558 622 aa12.99□□□□□ -0.33
SMAD9-201ENST00000350148 ATF7IP2Q5U623 682 aa12.99□□□□□ -0.33
SMAD9-201ENST00000350148 SIX6OS1Q8N1H7 587 aa12.99□□□□□ -0.33
SMAD9-201ENST00000350148 URGCPQ8TCY9 931 aa12.99□□□□□ -0.33
SMAD9-201ENST00000350148 SAMD15Q9P1V8 674 aa12.99□□□□□ -0.33
SMAD9-201ENST00000350148 PRPSAP2O60256 369 aa12.99□□□□□ -0.33
SMAD9-201ENST00000350148 PPFIA4O75335 1185 aa12.99□□□□□ -0.33
SMAD9-201ENST00000350148 CLTAP09496 248 aa12.99□□□□□ -0.33
SMAD9-201ENST00000350148 PTGER2P43116 358 aa12.99□□□□□ -0.33
SMAD9-201ENST00000350148 ALS2CLQ60I27 953 aa12.99□□□□□ -0.33
SMAD9-201ENST00000350148 B4GALNT4Q76KP1 1039 aa12.99□□□□□ -0.33
SMAD9-201ENST00000350148 VSIG10LQ86VR7 867 aa12.99□□□□□ -0.33
SMAD9-201ENST00000350148 SCFD1Q8WVM8 642 aa12.99□□□□□ -0.33
SMAD9-201ENST00000350148 SIPA1L3O60292 1781 aaPredicted RBP12.98□□□□□ -0.33
SMAD9-201ENST00000350148 MAPK13O15264 365 aa12.98□□□□□ -0.33
SMAD9-201ENST00000350148 ARL4AP40617 200 aa12.98□□□□□ -0.33
SMAD9-201ENST00000350148 HSD17B4P51659 736 aa12.98□□□□□ -0.33
SMAD9-201ENST00000350148 TRAPPC11Q7Z392 1133 aa12.98□□□□□ -0.33
SMAD9-201ENST00000350148 RFX6Q8HWS3 928 aa12.98□□□□□ -0.33
SMAD9-201ENST00000350148 PGBD4Q96DM1 585 aa12.98□□□□□ -0.33
SMAD9-201ENST00000350148 MARF1Q9Y4F3 1742 aaKnown RBP12.98□□□□□ -0.33
SMAD9-201ENST00000350148 LRRC10BA6NIK2 292 aa12.98□□□□□ -0.33
SMAD9-201ENST00000350148 MCF2LO15068 1137 aa12.98□□□□□ -0.33
SMAD9-201ENST00000350148 SLC12A3P55017 1021 aa12.98□□□□□ -0.33
SMAD9-201ENST00000350148 CAV1Q03135 178 aa12.98□□□□□ -0.33
SMAD9-201ENST00000350148 ITIH3Q06033 890 aa12.98□□□□□ -0.33
SMAD9-201ENST00000350148 VGLL4Q14135 290 aa12.98□□□□□ -0.33
SMAD9-201ENST00000350148 ZC2HC1CQ53FD0 456 aaPredicted RBP12.98□□□□□ -0.33
SMAD9-201ENST00000350148 OR6B3Q8NGW1 331 aa12.98□□□□□ -0.33
SMAD9-201ENST00000350148 ZNF564Q8TBZ8 553 aaPredicted RBP12.98□□□□□ -0.33
SMAD9-201ENST00000350148 DDX27Q96GQ7 796 aaKnown RBP12.98□□□□□ -0.33
SMAD9-201ENST00000350148 ASCC2Q9H1I8 757 aaPredicted RBP12.98□□□□□ -0.33
SMAD9-201ENST00000350148 DYNC1LI2O43237 492 aaPredicted RBP12.98□□□□□ -0.33
SMAD9-201ENST00000350148 TJP3O95049 919 aa12.98□□□□□ -0.33
SMAD9-201ENST00000350148 FTLP02792 175 aaPredicted RBP12.98□□□□□ -0.33
SMAD9-201ENST00000350148 SH3BGRP55822 239 aaPredicted RBP12.98□□□□□ -0.33
SMAD9-201ENST00000350148 TFDP2Q14188 446 aa12.98□□□□□ -0.33
SMAD9-201ENST00000350148 EFCAB12Q6NXP0 572 aa12.98□□□□□ -0.33
SMAD9-201ENST00000350148 KCNK9Q9NPC2 374 aa12.98□□□□□ -0.33
SMAD9-201ENST00000350148 SLC12A6Q9UHW9 1150 aa12.98□□□□□ -0.33
SMAD9-201ENST00000350148 RRP15Q9Y3B9 282 aaKnown RBP12.98□□□□□ -0.33
SMAD9-201ENST00000350148 MRFAP1Q9Y605 127 aa12.98□□□□□ -0.33
SMAD9-201ENST00000350148 UBR2Q8IWV8 1755 aa12.98□□□□□ -0.33
SMAD9-201ENST00000350148 PFDN1O60925 122 aa12.98□□□□□ -0.33
SMAD9-201ENST00000350148 RNASELQ05823 741 aaKnown RBP12.98□□□□□ -0.33
SMAD9-201ENST00000350148 SLC30A10Q6XR72 485 aa12.98□□□□□ -0.33
SMAD9-201ENST00000350148 CPLX4Q7Z7G2 160 aa12.98□□□□□ -0.33
SMAD9-201ENST00000350148 ATP8B4Q8TF62 1192 aa12.98□□□□□ -0.33
SMAD9-201ENST00000350148 KLRG1Q96E93 195 aa12.98□□□□□ -0.33
SMAD9-201ENST00000350148 SLITRK6Q9H5Y7 841 aa12.98□□□□□ -0.33
SMAD9-201ENST00000350148 ITGB4P16144 1822 aa12.97□□□□□ -0.33
SMAD9-201ENST00000350148 COL1A1P02452 1464 aaPredicted RBP12.97□□□□□ -0.33
SMAD9-201ENST00000350148 TARSL2A2RTX5 802 aaKnown RBP12.97□□□□□ -0.33
SMAD9-201ENST00000350148 SMIM22K7EJ46 135 aa12.97□□□□□ -0.33
SMAD9-201ENST00000350148 SART1O43290 800 aaKnown RBP12.97□□□□□ -0.33
SMAD9-201ENST00000350148 LYPLA2O95372 231 aa12.97□□□□□ -0.33
SMAD9-201ENST00000350148 TMEM253P0C7T8 217 aa12.97□□□□□ -0.33
SMAD9-201ENST00000350148 RARRES1P49788 294 aa12.97□□□□□ -0.33
SMAD9-201ENST00000350148 KRT71Q3SY84 523 aa12.97□□□□□ -0.33
SMAD9-201ENST00000350148 NOL9Q5SY16 702 aaKnown RBP12.97□□□□□ -0.33
SMAD9-201ENST00000350148 C4orf32Q8N8J7 132 aa12.97□□□□□ -0.33
SMAD9-201ENST00000350148 CEP120Q8N960 986 aa12.97□□□□□ -0.33
SMAD9-201ENST00000350148 SLC38A7Q9NVC3 462 aa12.97□□□□□ -0.33
SMAD9-201ENST00000350148 PARVAQ9NVD7 372 aa12.97□□□□□ -0.33
SMAD9-201ENST00000350148 UNCXA6NJT0 531 aa12.97□□□□□ -0.33
SMAD9-201ENST00000350148 KRT7P08729 469 aa12.97□□□□□ -0.33
SMAD9-201ENST00000350148 PNMA6AP0CW24 399 aaPredicted RBP12.97□□□□□ -0.33
SMAD9-201ENST00000350148 NPEPPSP55786 919 aa12.97□□□□□ -0.33
SMAD9-201ENST00000350148 ARL13BQ3SXY8 428 aa12.97□□□□□ -0.33
SMAD9-201ENST00000350148 OSBPL9Q96SU4 736 aa12.97□□□□□ -0.33
SMAD9-201ENST00000350148 VCXQ9H320 206 aa12.97□□□□□ -0.33
SMAD9-201ENST00000350148 ANAPC7Q9UJX3 599 aa12.97□□□□□ -0.33
SMAD9-201ENST00000350148 PCDHB2Q9Y5E7 798 aa12.97□□□□□ -0.33
SMAD9-201ENST00000350148 COL2A1P02458 1487 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms