RNA–Protein interactions for RNA: ENST00000346141.10

TUBD1-203, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-203ENST00000346141 NBR1Q14596 966 aa13.16□□□□□ -0.3
TUBD1-203ENST00000346141 HERC4Q5GLZ8 1057 aaPredicted RBP13.16□□□□□ -0.3
TUBD1-203ENST00000346141 SYCE2Q6PIF2 218 aa13.16□□□□□ -0.3
TUBD1-203ENST00000346141 RNF135Q8IUD6 432 aa13.16□□□□□ -0.3
TUBD1-203ENST00000346141 GAD1Q99259 594 aa13.16□□□□□ -0.3
TUBD1-203ENST00000346141 DAXXQ9UER7 740 aaPredicted RBP13.16□□□□□ -0.3
TUBD1-203ENST00000346141 FAN1Q9Y2M0 1017 aa13.16□□□□□ -0.3
TUBD1-203ENST00000346141 TRIOO75962 3097 aa13.16□□□□□ -0.3
TUBD1-203ENST00000346141 NR1I2O75469 434 aa13.16□□□□□ -0.3
TUBD1-203ENST00000346141 PRPHP41219 470 aa13.16□□□□□ -0.3
TUBD1-203ENST00000346141 NAMPTP43490 491 aa13.16□□□□□ -0.3
TUBD1-203ENST00000346141 MCM2P49736 904 aa13.16□□□□□ -0.3
TUBD1-203ENST00000346141 TOB1P50616 345 aaPredicted RBP13.16□□□□□ -0.3
TUBD1-203ENST00000346141 ITIH3Q06033 890 aa13.16□□□□□ -0.3
TUBD1-203ENST00000346141 PPP2R5AQ15172 486 aa13.16□□□□□ -0.3
TUBD1-203ENST00000346141 PTPN14Q15678 1187 aa13.16□□□□□ -0.3
TUBD1-203ENST00000346141 FAM187BQ17R55 369 aa13.16□□□□□ -0.3
TUBD1-203ENST00000346141 CES5AQ6NT32 575 aa13.16□□□□□ -0.3
TUBD1-203ENST00000346141 PPFIBP1Q86W92 1011 aa13.16□□□□□ -0.3
TUBD1-203ENST00000346141 COLGALT2Q8IYK4 626 aa13.16□□□□□ -0.3
TUBD1-203ENST00000346141 IGSF22Q8N9C0 903 aa13.16□□□□□ -0.3
TUBD1-203ENST00000346141 TMX3Q96JJ7 454 aa13.16□□□□□ -0.3
TUBD1-203ENST00000346141 NECTIN4Q96NY8 510 aa13.16□□□□□ -0.3
TUBD1-203ENST00000346141 VN1R3Q9BXE9 311 aa13.16□□□□□ -0.3
TUBD1-203ENST00000346141 FZD8Q9H461 694 aa13.16□□□□□ -0.3
TUBD1-203ENST00000346141 NXF3Q9H4D5 531 aaKnown RBP13.16□□□□□ -0.3
TUBD1-203ENST00000346141 RYDENQ9NUL5 291 aaKnown RBP13.16□□□□□ -0.3
TUBD1-203ENST00000346141 DZANK1Q9NVP4 752 aa13.16□□□□□ -0.3
TUBD1-203ENST00000346141 MUTYHQ9UIF7 546 aa13.16□□□□□ -0.3
TUBD1-203ENST00000346141 ARIH1Q9Y4X5 557 aaPredicted RBP13.16□□□□□ -0.3
TUBD1-203ENST00000346141 HES2Q9Y543 173 aa13.16□□□□□ -0.3
TUBD1-203ENST00000346141 PCDHB6Q9Y5E3 794 aa13.16□□□□□ -0.3
TUBD1-203ENST00000346141 NRP1O14786 923 aa13.15□□□□□ -0.3
TUBD1-203ENST00000346141 NPTXRO95502 500 aa13.15□□□□□ -0.3
TUBD1-203ENST00000346141 SCNN1GP51170 649 aa13.15□□□□□ -0.3
TUBD1-203ENST00000346141 DSC1Q08554 894 aa13.15□□□□□ -0.3
TUBD1-203ENST00000346141 MAPK6Q16659 721 aa13.15□□□□□ -0.3
TUBD1-203ENST00000346141 RILPL1Q5EBL4 403 aa13.15□□□□□ -0.3
TUBD1-203ENST00000346141 DEPTORQ8TB45 409 aa13.15□□□□□ -0.3
TUBD1-203ENST00000346141 SNX29Q8TEQ0 813 aa13.15□□□□□ -0.3
TUBD1-203ENST00000346141 AUTS2Q8WXX7 1259 aa13.15□□□□□ -0.3
TUBD1-203ENST00000346141 KIFAP3Q92845 792 aa13.15□□□□□ -0.3
TUBD1-203ENST00000346141 RPGRIP1Q96KN7 1286 aa13.15□□□□□ -0.3
TUBD1-203ENST00000346141 APOL6Q9BWW8 343 aa13.15□□□□□ -0.3
TUBD1-203ENST00000346141 EMILIN2Q9BXX0 1053 aa13.15□□□□□ -0.3
TUBD1-203ENST00000346141 BHMT2Q9H2M3 363 aa13.15□□□□□ -0.3
TUBD1-203ENST00000346141 ADAM7Q9H2U9 754 aa13.15□□□□□ -0.3
TUBD1-203ENST00000346141 RAPGEFL1Q9UHV5 662 aa13.15□□□□□ -0.3
TUBD1-203ENST00000346141 KIAA1024Q9UPX6 916 aa13.15□□□□□ -0.3
TUBD1-203ENST00000346141 MUC6Q6W4X9 2439 aa13.14□□□□□ -0.31
TUBD1-203ENST00000346141 N4BP3O15049 544 aa13.14□□□□□ -0.31
TUBD1-203ENST00000346141 SOD2P04179 222 aa13.14□□□□□ -0.31
TUBD1-203ENST00000346141 OR1G1P47890 313 aa13.14□□□□□ -0.31
TUBD1-203ENST00000346141 EFNA5P52803 228 aa13.14□□□□□ -0.31
TUBD1-203ENST00000346141 PRPF4BQ13523 1007 aaKnown RBP13.14□□□□□ -0.31
TUBD1-203ENST00000346141 ECM1Q16610 540 aa13.14□□□□□ -0.31
TUBD1-203ENST00000346141 KRT79Q5XKE5 535 aa13.14□□□□□ -0.31
TUBD1-203ENST00000346141 MCTP1Q6DN14 999 aa13.14□□□□□ -0.31
TUBD1-203ENST00000346141 BSNDQ8WZ55 320 aa13.14□□□□□ -0.31
TUBD1-203ENST00000346141 IFT74Q96LB3 600 aa13.14□□□□□ -0.31
TUBD1-203ENST00000346141 ZFP42Q96MM3 310 aa13.14□□□□□ -0.31
TUBD1-203ENST00000346141 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.14□□□□□ -0.31
TUBD1-203ENST00000346141 MRPL17Q9NRX2 175 aaKnown RBP13.14□□□□□ -0.31
TUBD1-203ENST00000346141 DDX19AQ9NUU7 478 aaKnown RBP13.14□□□□□ -0.31
TUBD1-203ENST00000346141 SSX2IPQ9Y2D8 614 aa13.14□□□□□ -0.31
TUBD1-203ENST00000346141 PRG3Q9Y2Y8 225 aaPredicted RBP13.14□□□□□ -0.31
TUBD1-203ENST00000346141 H3BQV1 296 aa13.13□□□□□ -0.31
TUBD1-203ENST00000346141 ACKR2O00590 384 aa13.13□□□□□ -0.31
TUBD1-203ENST00000346141 PRKCBP05771 671 aa13.13□□□□□ -0.31
TUBD1-203ENST00000346141 URODP06132 367 aa13.13□□□□□ -0.31
TUBD1-203ENST00000346141 AKAP5P24588 427 aa13.13□□□□□ -0.31
TUBD1-203ENST00000346141 GJB2P29033 226 aa13.13□□□□□ -0.31
TUBD1-203ENST00000346141 GRIK3Q13003 919 aa13.13□□□□□ -0.31
TUBD1-203ENST00000346141 TMEM132AQ24JP5 1023 aa13.13□□□□□ -0.31
TUBD1-203ENST00000346141 DTHD1Q6ZMT9 781 aa13.13□□□□□ -0.31
TUBD1-203ENST00000346141 CDR2LQ86X02 465 aaPredicted RBP13.13□□□□□ -0.31
TUBD1-203ENST00000346141 SLC22A17Q8WUG5 538 aa13.13□□□□□ -0.31
TUBD1-203ENST00000346141 RIPOR3Q96MK2 946 aa13.13□□□□□ -0.31
TUBD1-203ENST00000346141 RPS6KC1Q96S38 1066 aa13.13□□□□□ -0.31
TUBD1-203ENST00000346141 ADPGKQ9BRR6 497 aa13.13□□□□□ -0.31
TUBD1-203ENST00000346141 HERC2P3Q9BVR0 1158 aa13.13□□□□□ -0.31
TUBD1-203ENST00000346141 COLEC11Q9BWP8 271 aa13.13□□□□□ -0.31
TUBD1-203ENST00000346141 APOL5Q9BWW9 433 aa13.13□□□□□ -0.31
TUBD1-203ENST00000346141 CCDC113Q9H0I3 377 aa13.13□□□□□ -0.31
TUBD1-203ENST00000346141 PDZD7Q9H5P4 517 aa13.13□□□□□ -0.31
TUBD1-203ENST00000346141 MARCH5Q9NX47 278 aa13.13□□□□□ -0.31
TUBD1-203ENST00000346141 PARP2Q9UGN5 583 aa13.13□□□□□ -0.31
TUBD1-203ENST00000346141 DNM3Q9UQ16 869 aa13.13□□□□□ -0.31
TUBD1-203ENST00000346141 NR2E1Q9Y466 385 aa13.13□□□□□ -0.31
TUBD1-203ENST00000346141 LILRB3O75022 631 aa13.12□□□□□ -0.31
TUBD1-203ENST00000346141 CD2BP2O95400 341 aaKnown RBP13.12□□□□□ -0.31
TUBD1-203ENST00000346141 SSBP05455 408 aaKnown RBP eCLIP13.12□□□□□ -0.31
TUBD1-203ENST00000346141 EPCAMP16422 314 aa13.12□□□□□ -0.31
TUBD1-203ENST00000346141 KLRC2P26717 231 aa13.12□□□□□ -0.31
TUBD1-203ENST00000346141 MTHFRP42898 656 aa13.12□□□□□ -0.31
TUBD1-203ENST00000346141 CABP7Q86V35 215 aa13.12□□□□□ -0.31
TUBD1-203ENST00000346141 RNF168Q8IYW5 571 aaPredicted RBP13.12□□□□□ -0.31
TUBD1-203ENST00000346141 KCTD17Q8N5Z5 321 aa13.12□□□□□ -0.31
TUBD1-203ENST00000346141 GSTCDQ8NEC7 633 aa13.12□□□□□ -0.31
TUBD1-203ENST00000346141 EDAQ92838 391 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms