RNA–Protein interactions for RNA: ENST00000337273.9

TNPO1-201, Transcript of transportin 1, humanhuman

TSL 1 (best) BASIC

Gene TNPO1, Length 11,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-201ENST00000337273 RC3H1Q5TC82 1133 aaKnown RBP8.49□□□□□ -1.05
TNPO1-201ENST00000337273 SNX19Q92543 992 aa8.49□□□□□ -1.05
TNPO1-201ENST00000337273 THAP11Q96EK4 314 aa8.49□□□□□ -1.05
TNPO1-201ENST00000337273 BSDC1Q9NW68 430 aaPredicted RBP8.49□□□□□ -1.05
TNPO1-201ENST00000337273 KCND2Q9NZV8 630 aa8.49□□□□□ -1.05
TNPO1-201ENST00000337273 DCTN4Q9UJW0 460 aa8.49□□□□□ -1.05
TNPO1-201ENST00000337273 APOA4P06727 396 aa8.49□□□□□ -1.05
TNPO1-201ENST00000337273 PRCPP42785 496 aa8.49□□□□□ -1.05
TNPO1-201ENST00000337273 USP11P51784 963 aa8.49□□□□□ -1.05
TNPO1-201ENST00000337273 KPNB1Q14974 876 aaKnown RBP8.49□□□□□ -1.05
TNPO1-201ENST00000337273 KCTD1Q719H9 257 aa8.49□□□□□ -1.05
TNPO1-201ENST00000337273 IFT43Q96FT9 208 aa8.49□□□□□ -1.05
TNPO1-201ENST00000337273 CNPY3Q9BT09 278 aa8.49□□□□□ -1.05
TNPO1-201ENST00000337273 RANBP17Q9H2T7 1088 aaKnown RBP8.49□□□□□ -1.05
TNPO1-201ENST00000337273 V9GYQ6 96 aa8.49□□□□□ -1.05
TNPO1-201ENST00000337273 SLC16A3O15427 465 aaKnown RBP8.49□□□□□ -1.05
TNPO1-201ENST00000337273 VAMP7P51809 220 aa8.49□□□□□ -1.05
TNPO1-201ENST00000337273 DEFA1P59665 94 aa8.49□□□□□ -1.05
TNPO1-201ENST00000337273 DEFA3P59666 94 aa8.49□□□□□ -1.05
TNPO1-201ENST00000337273 ROR1Q01973 937 aa8.49□□□□□ -1.05
TNPO1-201ENST00000337273 ZNF473Q8WTR7 871 aaKnown RBP8.49□□□□□ -1.05
TNPO1-201ENST00000337273 COG4Q9H9E3 785 aa8.49□□□□□ -1.05
TNPO1-201ENST00000337273 WDR35Q9P2L0 1181 aa8.49□□□□□ -1.05
TNPO1-201ENST00000337273 PDXKO00764 312 aa8.49□□□□□ -1.05
TNPO1-201ENST00000337273 UGP2Q16851 508 aa8.49□□□□□ -1.05
TNPO1-201ENST00000337273 PDXDC2PQ6P474 469 aa8.49□□□□□ -1.05
TNPO1-201ENST00000337273 NLRP10Q86W26 655 aa8.49□□□□□ -1.05
TNPO1-201ENST00000337273 STAG2Q8N3U4 1231 aa8.49□□□□□ -1.05
TNPO1-201ENST00000337273 NEUROG2Q9H2A3 272 aa8.49□□□□□ -1.05
TNPO1-201ENST00000337273 BHMT2Q9H2M3 363 aa8.49□□□□□ -1.05
TNPO1-201ENST00000337273 POLE3Q9NRF9 147 aa8.49□□□□□ -1.05
TNPO1-201ENST00000337273 LIMA1Q9UHB6 759 aaKnown RBP8.49□□□□□ -1.05
TNPO1-201ENST00000337273 CDV3Q9UKY7 258 aaKnown RBP8.49□□□□□ -1.05
TNPO1-201ENST00000337273 PI4K2BG5E9Z4 385 aa8.49□□□□□ -1.05
TNPO1-201ENST00000337273 MYO1DO94832 1006 aa8.49□□□□□ -1.05
TNPO1-201ENST00000337273 TOB2Q14106 344 aaPredicted RBP8.49□□□□□ -1.05
TNPO1-201ENST00000337273 AASDHQ4L235 1098 aaPredicted RBP8.49□□□□□ -1.05
TNPO1-201ENST00000337273 LCORLQ8N3X6 602 aa8.49□□□□□ -1.05
TNPO1-201ENST00000337273 HPS3Q969F9 1004 aa8.49□□□□□ -1.05
TNPO1-201ENST00000337273 PAGR1Q9BTK6 254 aa8.49□□□□□ -1.05
TNPO1-201ENST00000337273 AP5M1Q9H0R1 490 aa8.49□□□□□ -1.05
TNPO1-201ENST00000337273 ASAP1Q9ULH1 1129 aa8.49□□□□□ -1.05
TNPO1-201ENST00000337273 AP1G2O75843 785 aa8.49□□□□□ -1.05
TNPO1-201ENST00000337273 ATP2C1P98194 919 aaPredicted RBP8.49□□□□□ -1.05
TNPO1-201ENST00000337273 PDIA5Q14554 519 aa8.49□□□□□ -1.05
TNPO1-201ENST00000337273 CLEC4GQ6UXB4 293 aa8.49□□□□□ -1.05
TNPO1-201ENST00000337273 C7orf31Q8N865 590 aa8.49□□□□□ -1.05
TNPO1-201ENST00000337273 CPVLQ9H3G5 476 aa8.49□□□□□ -1.05
TNPO1-201ENST00000337273 BFARQ9NZS9 450 aa8.49□□□□□ -1.05
TNPO1-201ENST00000337273 HEG1Q9ULI3 1381 aa8.48□□□□□ -1.05
TNPO1-201ENST00000337273 GTPBP10A4D1E9 387 aaKnown RBP8.48□□□□□ -1.05
TNPO1-201ENST00000337273 ADSLP30566 484 aaPredicted RBP8.48□□□□□ -1.05
TNPO1-201ENST00000337273 HSPH1Q92598 858 aa8.48□□□□□ -1.05
TNPO1-201ENST00000337273 LINC00854A0A1B0GVQ3 168 aa8.48□□□□□ -1.05
TNPO1-201ENST00000337273 HIF1AQ16665 826 aa8.48□□□□□ -1.05
TNPO1-201ENST00000337273 GPBP1L1Q9HC44 474 aaPredicted RBP8.48□□□□□ -1.05
TNPO1-201ENST00000337273 LMCD1Q9NZU5 365 aa8.48□□□□□ -1.05
TNPO1-201ENST00000337273 NXF1Q9UBU9 619 aaKnown RBP8.48□□□□□ -1.05
TNPO1-201ENST00000337273 A0A0G2JLW4 131 aa8.48□□□□□ -1.05
TNPO1-201ENST00000337273 DAB1O75553 588 aa8.48□□□□□ -1.05
TNPO1-201ENST00000337273 SMNDC1O75940 238 aaKnown RBP eCLIP8.48□□□□□ -1.05
TNPO1-201ENST00000337273 S100A5P33763 92 aa8.48□□□□□ -1.05
TNPO1-201ENST00000337273 PGM1P36871 562 aa8.48□□□□□ -1.05
TNPO1-201ENST00000337273 ANKRD7Q92527 254 aa8.48□□□□□ -1.05
TNPO1-201ENST00000337273 HPCAL4Q9UM19 191 aa8.48□□□□□ -1.05
TNPO1-201ENST00000337273 MAPK6Q16659 721 aa8.48□□□□□ -1.05
TNPO1-201ENST00000337273 PPEF1O14829 653 aaPredicted RBP8.48□□□□□ -1.05
TNPO1-201ENST00000337273 P4HBP07237 508 aaKnown RBP8.48□□□□□ -1.05
TNPO1-201ENST00000337273 CCDC159P0C7I6 412 aa8.48□□□□□ -1.05
TNPO1-201ENST00000337273 SDC4P31431 198 aa8.48□□□□□ -1.05
TNPO1-201ENST00000337273 GFPT1Q06210 699 aaPredicted RBP8.48□□□□□ -1.05
TNPO1-201ENST00000337273 RCSD1Q6JBY9 416 aa8.48□□□□□ -1.05
TNPO1-201ENST00000337273 BARHL2Q9NY43 387 aa8.48□□□□□ -1.05
TNPO1-201ENST00000337273 GTSE1Q9NYZ3 720 aa8.48□□□□□ -1.05
TNPO1-201ENST00000337273 MTO1Q9Y2Z2 717 aaKnown RBP8.48□□□□□ -1.05
TNPO1-201ENST00000337273 USP6P35125 1406 aa8.48□□□□□ -1.05
TNPO1-201ENST00000337273 MYO3BQ8WXR4 1341 aa8.48□□□□□ -1.05
TNPO1-201ENST00000337273 TNPO2O14787 897 aaKnown RBP8.48□□□□□ -1.05
TNPO1-201ENST00000337273 VSNL1P62760 191 aa8.48□□□□□ -1.05
TNPO1-201ENST00000337273 CAPRIN1Q14444 709 aaKnown RBP8.48□□□□□ -1.05
TNPO1-201ENST00000337273 PCYOX1LQ8NBM8 494 aa8.48□□□□□ -1.05
TNPO1-201ENST00000337273 ZNF507Q8TCN5 953 aa8.48□□□□□ -1.05
TNPO1-201ENST00000337273 NOP9Q86U38 636 aaKnown RBP8.48□□□□□ -1.05
TNPO1-201ENST00000337273 RCOR2Q8IZ40 523 aa8.48□□□□□ -1.05
TNPO1-201ENST00000337273 LZICQ8WZA0 190 aa8.48□□□□□ -1.05
TNPO1-201ENST00000337273 ATP6V0A4Q9HBG4 840 aa8.48□□□□□ -1.05
TNPO1-201ENST00000337273 ADA2Q9NZK5 511 aa8.48□□□□□ -1.05
TNPO1-201ENST00000337273 PHF20L1A8MW92 1017 aa8.48□□□□□ -1.05
TNPO1-201ENST00000337273 PHF2O75151 1096 aa8.48□□□□□ -1.05
TNPO1-201ENST00000337273 PEX3P56589 373 aa8.48□□□□□ -1.05
TNPO1-201ENST00000337273 CUL3Q13618 768 aa8.48□□□□□ -1.05
TNPO1-201ENST00000337273 ZC3H12BQ5HYM0 836 aaKnown RBP8.48□□□□□ -1.05
TNPO1-201ENST00000337273 C10orf88Q9H8K7 445 aa8.48□□□□□ -1.05
TNPO1-201ENST00000337273 SLC9A2Q9UBY0 812 aa8.48□□□□□ -1.05
TNPO1-201ENST00000337273 ASCC3Q8N3C0 2202 aaKnown RBP8.48□□□□□ -1.05
TNPO1-201ENST00000337273 A2ML1A8K2U0 1454 aa8.48□□□□□ -1.05
TNPO1-201ENST00000337273 GNA15P30679 374 aa8.47□□□□□ -1.05
TNPO1-201ENST00000337273 PDIA2Q13087 525 aaKnown RBP8.47□□□□□ -1.05
TNPO1-201ENST00000337273 KIAA0825Q8IV33 1275 aa8.47□□□□□ -1.05
TNPO1-201ENST00000337273 KRT35Q92764 455 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 405.4 ms