RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 PDE6BP35913 854 aa15.48■□□□□ 0.07
SNX20-202ENST00000330943 KRT17Q04695 432 aa15.48■□□□□ 0.07
SNX20-202ENST00000330943 SIX1Q15475 284 aaPredicted RBP15.48■□□□□ 0.07
SNX20-202ENST00000330943 VPS72Q15906 364 aa15.48■□□□□ 0.07
SNX20-202ENST00000330943 ZNF568Q3ZCX4 644 aa15.48■□□□□ 0.07
SNX20-202ENST00000330943 C1orf54Q8WWF1 131 aa15.48■□□□□ 0.07
SNX20-202ENST00000330943 RPS6KC1Q96S38 1066 aa15.48■□□□□ 0.07
SNX20-202ENST00000330943 WNT8AQ9H1J5 351 aa15.48■□□□□ 0.07
SNX20-202ENST00000330943 DNAJC18Q9H819 358 aa15.48■□□□□ 0.07
SNX20-202ENST00000330943 TNRC6CQ9HCJ0 1690 aaKnown RBP15.48■□□□□ 0.07
SNX20-202ENST00000330943 EML1O00423 815 aa15.47■□□□□ 0.07
SNX20-202ENST00000330943 CALRP27797 417 aaKnown RBP15.47■□□□□ 0.07
SNX20-202ENST00000330943 ABL2P42684 1182 aa15.47■□□□□ 0.07
SNX20-202ENST00000330943 SNAP25P60880 206 aa15.47■□□□□ 0.07
SNX20-202ENST00000330943 BLMHQ13867 455 aa15.47■□□□□ 0.07
SNX20-202ENST00000330943 KYNUQ16719 465 aa15.47■□□□□ 0.07
SNX20-202ENST00000330943 TRIM68Q6AZZ1 485 aa15.47■□□□□ 0.07
SNX20-202ENST00000330943 MOXD1Q6UVY6 613 aa15.47■□□□□ 0.07
SNX20-202ENST00000330943 SLC30A10Q6XR72 485 aa15.47■□□□□ 0.07
SNX20-202ENST00000330943 FAM47EQ6ZV65 393 aa15.47■□□□□ 0.07
SNX20-202ENST00000330943 ECHDC2Q86YB7 292 aa15.47■□□□□ 0.07
SNX20-202ENST00000330943 SLF2Q8IX21 1173 aa15.47■□□□□ 0.07
SNX20-202ENST00000330943 ANKLE1Q8NAG6 615 aa15.47■□□□□ 0.07
SNX20-202ENST00000330943 FBF1Q8TES7 1133 aa15.47■□□□□ 0.07
SNX20-202ENST00000330943 SAAL1Q96ER3 474 aa15.47■□□□□ 0.07
SNX20-202ENST00000330943 DAGLAQ9Y4D2 1042 aa15.47■□□□□ 0.07
SNX20-202ENST00000330943 KIF3CO14782 793 aa15.47■□□□□ 0.07
SNX20-202ENST00000330943 UNC5CO95185 931 aa15.47■□□□□ 0.07
SNX20-202ENST00000330943 BCRP11274 1271 aa15.47■□□□□ 0.07
SNX20-202ENST00000330943 CCNB1P14635 433 aa15.47■□□□□ 0.07
SNX20-202ENST00000330943 GPSM2P81274 684 aa15.47■□□□□ 0.07
SNX20-202ENST00000330943 SRRM1Q8IYB3 904 aaKnown RBP15.47■□□□□ 0.07
SNX20-202ENST00000330943 CNBD1Q8NA66 436 aa15.47■□□□□ 0.07
SNX20-202ENST00000330943 SLC17A8Q8NDX2 589 aa15.47■□□□□ 0.07
SNX20-202ENST00000330943 YIPF3Q9GZM5 350 aa15.47■□□□□ 0.07
SNX20-202ENST00000330943 AGPAT3Q9NRZ7 376 aa15.47■□□□□ 0.07
SNX20-202ENST00000330943 SERPINB13Q9UIV8 391 aa15.47■□□□□ 0.07
SNX20-202ENST00000330943 CORO1CQ9ULV4 474 aaPredicted RBP15.47■□□□□ 0.07
SNX20-202ENST00000330943 GAKO14976 1311 aa15.47■□□□□ 0.07
SNX20-202ENST00000330943 EME2A4GXA9 379 aaPredicted RBP15.47■□□□□ 0.07
SNX20-202ENST00000330943 ENO4A6NNW6 628 aa15.47■□□□□ 0.07
SNX20-202ENST00000330943 TBX3O15119 743 aa15.47■□□□□ 0.07
SNX20-202ENST00000330943 TP73O15350 636 aa15.47■□□□□ 0.07
SNX20-202ENST00000330943 MSH4O15457 936 aa15.47■□□□□ 0.07
SNX20-202ENST00000330943 CLDN3O15551 220 aa15.47■□□□□ 0.07
SNX20-202ENST00000330943 AP3B2Q13367 1082 aa15.47■□□□□ 0.07
SNX20-202ENST00000330943 TRIP13Q15645 432 aaPredicted RBP15.47■□□□□ 0.07
SNX20-202ENST00000330943 ARHGEF19Q8IW93 802 aa15.47■□□□□ 0.07
SNX20-202ENST00000330943 SEPT12Q8IYM1 358 aa15.47■□□□□ 0.07
SNX20-202ENST00000330943 CYP4X1Q8N118 509 aa15.47■□□□□ 0.07
SNX20-202ENST00000330943 CYP2W1Q8TAV3 490 aa15.47■□□□□ 0.07
SNX20-202ENST00000330943 CRYGNQ8WXF5 182 aa15.47■□□□□ 0.07
SNX20-202ENST00000330943 CD101Q93033 1021 aa15.47■□□□□ 0.07
SNX20-202ENST00000330943 PARVGQ9HBI0 331 aa15.47■□□□□ 0.07
SNX20-202ENST00000330943 DDX4Q9NQI0 724 aaKnown RBP15.47■□□□□ 0.07
SNX20-202ENST00000330943 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.47■□□□□ 0.07
SNX20-202ENST00000330943 ZBTB39O15060 712 aa15.46■□□□□ 0.07
SNX20-202ENST00000330943 THAP12O43422 761 aa15.46■□□□□ 0.07
SNX20-202ENST00000330943 EXOC3O60645 756 aa15.46■□□□□ 0.07
SNX20-202ENST00000330943 HIP1RO75146 1068 aa15.46■□□□□ 0.07
SNX20-202ENST00000330943 LUC7L3O95232 432 aaKnown RBP15.46■□□□□ 0.07
SNX20-202ENST00000330943 BFSP1Q12934 665 aa15.46■□□□□ 0.07
SNX20-202ENST00000330943 MKRN3Q13064 507 aaKnown RBP15.46■□□□□ 0.07
SNX20-202ENST00000330943 Q4G0T1 1027 aa15.46■□□□□ 0.07
SNX20-202ENST00000330943 INTS8Q75QN2 995 aaKnown RBP15.46■□□□□ 0.07
SNX20-202ENST00000330943 UTP4Q969X6 686 aaKnown RBP15.46■□□□□ 0.07
SNX20-202ENST00000330943 FAM163AQ96GL9 167 aaPredicted RBP15.46■□□□□ 0.07
SNX20-202ENST00000330943 RAB3IPQ96QF0 476 aaPredicted RBP15.46■□□□□ 0.07
SNX20-202ENST00000330943 SPATS2LQ9NUQ6 558 aaKnown RBP15.46■□□□□ 0.07
SNX20-202ENST00000330943 NKIRAS1Q9NYS0 192 aa15.46■□□□□ 0.07
SNX20-202ENST00000330943 NKX1-2Q9UD57 310 aaPredicted RBP15.46■□□□□ 0.07
SNX20-202ENST00000330943 VAV3Q9UKW4 847 aa15.46■□□□□ 0.07
SNX20-202ENST00000330943 TULP1O00294 542 aaPredicted RBP15.46■□□□□ 0.06
SNX20-202ENST00000330943 TTC4O95801 387 aa15.46■□□□□ 0.06
SNX20-202ENST00000330943 USH1GQ495M9 461 aa15.46■□□□□ 0.06
SNX20-202ENST00000330943 SGO2Q562F6 1265 aa15.46■□□□□ 0.06
SNX20-202ENST00000330943 RNF43Q68DV7 783 aa15.46■□□□□ 0.06
SNX20-202ENST00000330943 TPH2Q8IWU9 490 aa15.46■□□□□ 0.06
SNX20-202ENST00000330943 ZNF564Q8TBZ8 553 aaPredicted RBP15.46■□□□□ 0.06
SNX20-202ENST00000330943 NAF1Q96HR8 494 aaKnown RBP15.46■□□□□ 0.06
SNX20-202ENST00000330943 MAGEB18Q96M61 343 aa15.46■□□□□ 0.06
SNX20-202ENST00000330943 FAM20AQ96MK3 541 aa15.46■□□□□ 0.06
SNX20-202ENST00000330943 PAIP2Q9BPZ3 127 aaKnown RBP15.46■□□□□ 0.06
SNX20-202ENST00000330943 OSBPL1AQ9BXW6 950 aa15.46■□□□□ 0.06
SNX20-202ENST00000330943 AHDC1Q5TGY3 1603 aaPredicted RBP15.46■□□□□ 0.06
SNX20-202ENST00000330943 CHMP2AO43633 222 aa15.45■□□□□ 0.06
SNX20-202ENST00000330943 UPP2O95045 317 aa15.45■□□□□ 0.06
SNX20-202ENST00000330943 TAL1P17542 331 aaPredicted RBP15.45■□□□□ 0.06
SNX20-202ENST00000330943 SHMT1P34896 483 aa15.45■□□□□ 0.06
SNX20-202ENST00000330943 MTFR1Q15390 333 aa15.45■□□□□ 0.06
SNX20-202ENST00000330943 NSMFQ6X4W1 530 aa15.45■□□□□ 0.06
SNX20-202ENST00000330943 ARHGEF18Q6ZSZ5 1173 aa15.45■□□□□ 0.06
SNX20-202ENST00000330943 FAM178BQ8IXR5 827 aa15.45■□□□□ 0.06
SNX20-202ENST00000330943 LMO3Q8TAP4 145 aa15.45■□□□□ 0.06
SNX20-202ENST00000330943 PWWP2AQ96N64 755 aa15.45■□□□□ 0.06
SNX20-202ENST00000330943 PCDHB18PQ96TA0 734 aa15.45■□□□□ 0.06
SNX20-202ENST00000330943 NUP85Q9BW27 656 aa15.45■□□□□ 0.06
SNX20-202ENST00000330943 MOV10L1Q9BXT6 1211 aaKnown RBP15.45■□□□□ 0.06
SNX20-202ENST00000330943 PITPNM3Q9BZ71 974 aa15.45■□□□□ 0.06
SNX20-202ENST00000330943 WHRNQ9P202 907 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms