RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 LAMB3Q13751 1172 aa12.15□□□□□ -0.46
COL4A5-201ENST00000328300 APPL2Q8NEU8 664 aa12.15□□□□□ -0.46
COL4A5-201ENST00000328300 RGL1Q9NZL6 768 aa12.15□□□□□ -0.46
COL4A5-201ENST00000328300 TARSL2A2RTX5 802 aaKnown RBP12.15□□□□□ -0.46
COL4A5-201ENST00000328300 MYMKA6NI61 221 aa12.15□□□□□ -0.46
COL4A5-201ENST00000328300 TGFB3P10600 412 aa12.15□□□□□ -0.46
COL4A5-201ENST00000328300 STX1BP61266 288 aa12.15□□□□□ -0.46
COL4A5-201ENST00000328300 C2orf54Q08AI8 447 aa12.15□□□□□ -0.46
COL4A5-201ENST00000328300 SNRNP35Q16560 246 aaKnown RBP12.15□□□□□ -0.46
COL4A5-201ENST00000328300 ATG16L1Q676U5 607 aa12.15□□□□□ -0.46
COL4A5-201ENST00000328300 C4orf22Q6V702 233 aa12.15□□□□□ -0.46
COL4A5-201ENST00000328300 C11orf70Q9BRQ4 267 aa12.15□□□□□ -0.46
COL4A5-201ENST00000328300 FOXP3Q9BZS1 431 aa12.15□□□□□ -0.46
COL4A5-201ENST00000328300 DBR1Q9UK59 544 aaKnown RBP12.15□□□□□ -0.46
COL4A5-201ENST00000328300 MON2Q7Z3U7 1717 aa12.15□□□□□ -0.47
COL4A5-201ENST00000328300 CLTAP09496 248 aa12.15□□□□□ -0.47
COL4A5-201ENST00000328300 NMT1P30419 496 aaKnown RBP12.15□□□□□ -0.47
COL4A5-201ENST00000328300 EPHX2P34913 555 aa12.15□□□□□ -0.47
COL4A5-201ENST00000328300 PHLDB3Q6NSJ2 640 aa12.15□□□□□ -0.47
COL4A5-201ENST00000328300 PPP1R16BQ96T49 567 aa12.15□□□□□ -0.47
COL4A5-201ENST00000328300 CFAP69A5D8W1 941 aa12.14□□□□□ -0.47
COL4A5-201ENST00000328300 KRT38O76015 456 aa12.14□□□□□ -0.47
COL4A5-201ENST00000328300 KLRK1P26718 216 aa12.14□□□□□ -0.47
COL4A5-201ENST00000328300 RPS6P62753 249 aaKnown RBP12.14□□□□□ -0.47
COL4A5-201ENST00000328300 CXCL9Q07325 125 aa12.14□□□□□ -0.47
COL4A5-201ENST00000328300 PYROXD1Q8WU10 500 aa12.14□□□□□ -0.47
COL4A5-201ENST00000328300 SAAL1Q96ER3 474 aa12.14□□□□□ -0.47
COL4A5-201ENST00000328300 FAM129AQ9BZQ8 928 aa12.14□□□□□ -0.47
COL4A5-201ENST00000328300 CELF2O95319 508 aaKnown RBP12.14□□□□□ -0.47
COL4A5-201ENST00000328300 RECQLP46063 649 aaPredicted RBP12.14□□□□□ -0.47
COL4A5-201ENST00000328300 EPHB1P54762 984 aa12.14□□□□□ -0.47
COL4A5-201ENST00000328300 DRP2Q13474 957 aa12.14□□□□□ -0.47
COL4A5-201ENST00000328300 SLC18A3Q16572 532 aa12.14□□□□□ -0.47
COL4A5-201ENST00000328300 NOTUMQ6P988 496 aa12.14□□□□□ -0.47
COL4A5-201ENST00000328300 USP50Q70EL3 339 aaPredicted RBP12.14□□□□□ -0.47
COL4A5-201ENST00000328300 ARHGEF2Q92974 986 aaKnown RBP12.14□□□□□ -0.47
COL4A5-201ENST00000328300 ZWILCHQ9H900 591 aa12.14□□□□□ -0.47
COL4A5-201ENST00000328300 PIN4Q9Y237 131 aaKnown RBP12.14□□□□□ -0.47
COL4A5-201ENST00000328300 ZNF18P17022 549 aa12.14□□□□□ -0.47
COL4A5-201ENST00000328300 RNF180Q86T96 592 aa12.14□□□□□ -0.47
COL4A5-201ENST00000328300 EXOC1LA0A1B0GW35 172 aa12.14□□□□□ -0.47
COL4A5-201ENST00000328300 CARNS1A5YM72 827 aa12.14□□□□□ -0.47
COL4A5-201ENST00000328300 MSH4O15457 936 aa12.14□□□□□ -0.47
COL4A5-201ENST00000328300 HOXA2O43364 376 aa12.14□□□□□ -0.47
COL4A5-201ENST00000328300 GPC4O75487 556 aa12.14□□□□□ -0.47
COL4A5-201ENST00000328300 FTLP02792 175 aaPredicted RBP12.14□□□□□ -0.47
COL4A5-201ENST00000328300 PCSK1P29120 753 aa12.14□□□□□ -0.47
COL4A5-201ENST00000328300 ATF7IP2Q5U623 682 aa12.14□□□□□ -0.47
COL4A5-201ENST00000328300 SAMD7Q7Z3H4 446 aa12.14□□□□□ -0.47
COL4A5-201ENST00000328300 RCOR2Q8IZ40 523 aa12.14□□□□□ -0.47
COL4A5-201ENST00000328300 KIAA1257Q9ULG3 409 aa12.14□□□□□ -0.47
COL4A5-201ENST00000328300 ANGPTL3Q9Y5C1 460 aa12.14□□□□□ -0.47
COL4A5-201ENST00000328300 DYNC1LI2O43237 492 aaPredicted RBP12.14□□□□□ -0.47
COL4A5-201ENST00000328300 CYP2C8P10632 490 aa12.14□□□□□ -0.47
COL4A5-201ENST00000328300 TAC1P20366 129 aa12.14□□□□□ -0.47
COL4A5-201ENST00000328300 TAF1BQ53T94 588 aaPredicted RBP12.14□□□□□ -0.47
COL4A5-201ENST00000328300 RNF219Q5W0B1 726 aaPredicted RBP12.14□□□□□ -0.47
COL4A5-201ENST00000328300 ERGIC2Q96RQ1 377 aa12.14□□□□□ -0.47
COL4A5-201ENST00000328300 HAUS8Q9BT25 410 aa12.14□□□□□ -0.47
COL4A5-201ENST00000328300 INPP5FQ9Y2H2 1132 aa12.14□□□□□ -0.47
COL4A5-201ENST00000328300 STRNO43815 780 aa12.13□□□□□ -0.47
COL4A5-201ENST00000328300 GARTP22102 1010 aa12.13□□□□□ -0.47
COL4A5-201ENST00000328300 NAMPTP43490 491 aa12.13□□□□□ -0.47
COL4A5-201ENST00000328300 MAPRE1Q15691 268 aaKnown RBP12.13□□□□□ -0.47
COL4A5-201ENST00000328300 C9orf131Q5VYM1 1079 aa12.13□□□□□ -0.47
COL4A5-201ENST00000328300 RAPH1Q70E73 1250 aa12.13□□□□□ -0.47
COL4A5-201ENST00000328300 KIF9Q9HAQ2 790 aa12.13□□□□□ -0.47
COL4A5-201ENST00000328300 ATP8A1Q9Y2Q0 1164 aa12.13□□□□□ -0.47
COL4A5-201ENST00000328300 MRC1P22897 1456 aa12.13□□□□□ -0.47
COL4A5-201ENST00000328300 MANSC4A6NHS7 340 aaPredicted RBP12.13□□□□□ -0.47
COL4A5-201ENST00000328300 POC1B-GALNT4F8VUJ3 575 aa12.13□□□□□ -0.47
COL4A5-201ENST00000328300 SNX1Q13596 522 aa12.13□□□□□ -0.47
COL4A5-201ENST00000328300 IQCB1Q15051 598 aa12.13□□□□□ -0.47
COL4A5-201ENST00000328300 NUDT18Q6ZVK8 323 aa12.13□□□□□ -0.47
COL4A5-201ENST00000328300 SMIM5Q71RC9 77 aa12.13□□□□□ -0.47
COL4A5-201ENST00000328300 KIRREL3Q8IZU9 778 aa12.13□□□□□ -0.47
COL4A5-201ENST00000328300 CCDC197Q8NCU1 140 aa12.13□□□□□ -0.47
COL4A5-201ENST00000328300 FAF2Q96CS3 445 aa12.13□□□□□ -0.47
COL4A5-201ENST00000328300 PPP1R12AO14974 1030 aaPredicted RBP12.13□□□□□ -0.47
COL4A5-201ENST00000328300 DYNLT1P63172 113 aa12.13□□□□□ -0.47
COL4A5-201ENST00000328300 ARHGAP18Q8N392 663 aa12.13□□□□□ -0.47
COL4A5-201ENST00000328300 RYBPQ8N488 228 aaPredicted RBP12.13□□□□□ -0.47
COL4A5-201ENST00000328300 GBA2Q9HCG7 927 aaPredicted RBP12.13□□□□□ -0.47
COL4A5-201ENST00000328300 DSG3P32926 999 aa12.13□□□□□ -0.47
COL4A5-201ENST00000328300 NNMTP40261 264 aa12.13□□□□□ -0.47
COL4A5-201ENST00000328300 NR1I3Q14994 352 aa12.13□□□□□ -0.47
COL4A5-201ENST00000328300 C4orf19Q8IY42 314 aa12.13□□□□□ -0.47
COL4A5-201ENST00000328300 HSPH1Q92598 858 aa12.13□□□□□ -0.47
COL4A5-201ENST00000328300 CYP2C9P11712 490 aa12.13□□□□□ -0.47
COL4A5-201ENST00000328300 ITGA4P13612 1032 aa12.13□□□□□ -0.47
COL4A5-201ENST00000328300 PIGHQ14442 188 aaPredicted RBP12.13□□□□□ -0.47
COL4A5-201ENST00000328300 BTBD8Q5XKL5 378 aa12.13□□□□□ -0.47
COL4A5-201ENST00000328300 TXNRD3Q86VQ6 643 aa12.13□□□□□ -0.47
COL4A5-201ENST00000328300 VGLL2Q8N8G2 317 aa12.13□□□□□ -0.47
COL4A5-201ENST00000328300 AGBL1Q96MI9 1066 aa12.13□□□□□ -0.47
COL4A5-201ENST00000328300 C17orf102A2RUQ5 167 aa12.12□□□□□ -0.47
COL4A5-201ENST00000328300 KIF3CO14782 793 aa12.12□□□□□ -0.47
COL4A5-201ENST00000328300 SUPT20HL2P0C7V6 817 aa12.12□□□□□ -0.47
COL4A5-201ENST00000328300 CASP1P29466 404 aa12.12□□□□□ -0.47
COL4A5-201ENST00000328300 GFPT1Q06210 699 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms