RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 ALAS1P13196 640 aa15.66■□□□□ 0.1
SSBP3-201ENST00000326956 GCLMP48507 274 aa15.66■□□□□ 0.1
SSBP3-201ENST00000326956 KRT17Q04695 432 aa15.66■□□□□ 0.1
SSBP3-201ENST00000326956 MKRN4PQ13434 485 aaPredicted RBP15.66■□□□□ 0.1
SSBP3-201ENST00000326956 ZDHHC14Q8IZN3 488 aa15.66■□□□□ 0.1
SSBP3-201ENST00000326956 KIF2BQ8N4N8 673 aa15.66■□□□□ 0.1
SSBP3-201ENST00000326956 COA1Q9GZY4 146 aa15.66■□□□□ 0.1
SSBP3-201ENST00000326956 CFBP00751 764 aa15.66■□□□□ 0.1
SSBP3-201ENST00000326956 DLATP10515 647 aaKnown RBP15.66■□□□□ 0.1
SSBP3-201ENST00000326956 BRAFP15056 766 aa15.66■□□□□ 0.1
SSBP3-201ENST00000326956 TAL1P17542 331 aaPredicted RBP15.66■□□□□ 0.1
SSBP3-201ENST00000326956 CCND1P24385 295 aa15.66■□□□□ 0.1
SSBP3-201ENST00000326956 VAMP7P51809 220 aa15.66■□□□□ 0.1
SSBP3-201ENST00000326956 NFIAQ12857 509 aa15.66■□□□□ 0.1
SSBP3-201ENST00000326956 ARHGEF19Q8IW93 802 aa15.66■□□□□ 0.1
SSBP3-201ENST00000326956 C1orf54Q8WWF1 131 aa15.66■□□□□ 0.1
SSBP3-201ENST00000326956 MKL1Q969V6 931 aa15.66■□□□□ 0.1
SSBP3-201ENST00000326956 BTBD6Q96KE9 485 aa15.66■□□□□ 0.1
SSBP3-201ENST00000326956 BATF3Q9NR55 127 aa15.66■□□□□ 0.1
SSBP3-201ENST00000326956 DNAJC17Q9NVM6 304 aaKnown RBP15.66■□□□□ 0.1
SSBP3-201ENST00000326956 CYP1B1Q16678 543 aa15.65■□□□□ 0.1
SSBP3-201ENST00000326956 MAEAQ7L5Y9 396 aa15.65■□□□□ 0.1
SSBP3-201ENST00000326956 OTOP1Q7RTM1 612 aa15.65■□□□□ 0.1
SSBP3-201ENST00000326956 PPM1KQ8N3J5 372 aa15.65■□□□□ 0.1
SSBP3-201ENST00000326956 TGS1Q96RS0 853 aaKnown RBP15.65■□□□□ 0.1
SSBP3-201ENST00000326956 O00370 1275 aa15.65■□□□□ 0.1
SSBP3-201ENST00000326956 CLDN3O15551 220 aa15.65■□□□□ 0.1
SSBP3-201ENST00000326956 SGPL1O95470 568 aa15.65■□□□□ 0.1
SSBP3-201ENST00000326956 PRELPP51888 382 aa15.65■□□□□ 0.1
SSBP3-201ENST00000326956 ARHGEF18Q6ZSZ5 1173 aa15.65■□□□□ 0.1
SSBP3-201ENST00000326956 CCDC77Q9BR77 488 aa15.65■□□□□ 0.1
SSBP3-201ENST00000326956 DNAJC18Q9H819 358 aa15.65■□□□□ 0.1
SSBP3-201ENST00000326956 WHRNQ9P202 907 aa15.65■□□□□ 0.1
SSBP3-201ENST00000326956 PCDHA3Q9Y5H8 950 aa15.65■□□□□ 0.1
SSBP3-201ENST00000326956 GSTTP1A0A1W2PQM5 241 aa15.64■□□□□ 0.09
SSBP3-201ENST00000326956 UBAP1LF5GYI3 381 aa15.64■□□□□ 0.09
SSBP3-201ENST00000326956 DIAPH2O60879 1101 aa15.64■□□□□ 0.09
SSBP3-201ENST00000326956 GAS8O95995 478 aa15.64■□□□□ 0.09
SSBP3-201ENST00000326956 GZMAP12544 262 aa15.64■□□□□ 0.09
SSBP3-201ENST00000326956 ITIH2P19823 946 aa15.64■□□□□ 0.09
SSBP3-201ENST00000326956 KCNA4P22459 653 aa15.64■□□□□ 0.09
SSBP3-201ENST00000326956 PAX7P23759 505 aa15.64■□□□□ 0.09
SSBP3-201ENST00000326956 PSEN1P49768 467 aa15.64■□□□□ 0.09
SSBP3-201ENST00000326956 RRP1BQ14684 758 aaKnown RBP15.64■□□□□ 0.09
SSBP3-201ENST00000326956 TNFAIP8L3Q5GJ75 292 aa15.64■□□□□ 0.09
SSBP3-201ENST00000326956 NSMFQ6X4W1 530 aa15.64■□□□□ 0.09
SSBP3-201ENST00000326956 FBF1Q8TES7 1133 aa15.64■□□□□ 0.09
SSBP3-201ENST00000326956 POP1Q99575 1024 aaKnown RBP15.64■□□□□ 0.09
SSBP3-201ENST00000326956 TBK1Q9UHD2 729 aa15.64■□□□□ 0.09
SSBP3-201ENST00000326956 C10orf71Q711Q0 1435 aa15.64■□□□□ 0.09
SSBP3-201ENST00000326956 CYP3A4P08684 503 aa15.64■□□□□ 0.09
SSBP3-201ENST00000326956 RBM5P52756 815 aaKnown RBP eCLIP15.64■□□□□ 0.09
SSBP3-201ENST00000326956 DLG4P78352 724 aa15.64■□□□□ 0.09
SSBP3-201ENST00000326956 MKRN3Q13064 507 aaKnown RBP15.64■□□□□ 0.09
SSBP3-201ENST00000326956 TRIP13Q15645 432 aaPredicted RBP15.64■□□□□ 0.09
SSBP3-201ENST00000326956 KYNUQ16719 465 aa15.64■□□□□ 0.09
SSBP3-201ENST00000326956 FAM196AQ6ZSG2 479 aa15.64■□□□□ 0.09
SSBP3-201ENST00000326956 CKAP2Q8WWK9 683 aa15.64■□□□□ 0.09
SSBP3-201ENST00000326956 RXFP1Q9HBX9 757 aa15.64■□□□□ 0.09
SSBP3-201ENST00000326956 KCND2Q9NZV8 630 aa15.64■□□□□ 0.09
SSBP3-201ENST00000326956 HIP1RO75146 1068 aa15.64■□□□□ 0.09
SSBP3-201ENST00000326956 BMP3P12645 472 aa15.64■□□□□ 0.09
SSBP3-201ENST00000326956 CREB1P16220 341 aa15.64■□□□□ 0.09
SSBP3-201ENST00000326956 MSH2P43246 934 aa15.64■□□□□ 0.09
SSBP3-201ENST00000326956 MXI1P50539 228 aa15.64■□□□□ 0.09
SSBP3-201ENST00000326956 ADCY1Q08828 1119 aa15.64■□□□□ 0.09
SSBP3-201ENST00000326956 BNIP1Q12981 228 aa15.64■□□□□ 0.09
SSBP3-201ENST00000326956 TCEAL1Q15170 157 aa15.64■□□□□ 0.09
SSBP3-201ENST00000326956 SHROOM1Q2M3G4 852 aaPredicted RBP15.64■□□□□ 0.09
SSBP3-201ENST00000326956 SLC9A9Q8IVB4 645 aa15.64■□□□□ 0.09
SSBP3-201ENST00000326956 CERS5Q8N5B7 392 aa15.64■□□□□ 0.09
SSBP3-201ENST00000326956 LMO3Q8TAP4 145 aa15.64■□□□□ 0.09
SSBP3-201ENST00000326956 PRCCQ92733 491 aaPredicted RBP15.64■□□□□ 0.09
SSBP3-201ENST00000326956 SNF8Q96H20 258 aa15.64■□□□□ 0.09
SSBP3-201ENST00000326956 PAIP2Q9BPZ3 127 aaKnown RBP15.64■□□□□ 0.09
SSBP3-201ENST00000326956 LARSQ9P2J5 1176 aaKnown RBP15.64■□□□□ 0.09
SSBP3-201ENST00000326956 P4HA2O15460 535 aa15.63■□□□□ 0.09
SSBP3-201ENST00000326956 CYP26A1O43174 497 aa15.63■□□□□ 0.09
SSBP3-201ENST00000326956 TTC4O95801 387 aa15.63■□□□□ 0.09
SSBP3-201ENST00000326956 NDUFB10O96000 172 aa15.63■□□□□ 0.09
SSBP3-201ENST00000326956 OAS1P00973 400 aaKnown RBP15.63■□□□□ 0.09
SSBP3-201ENST00000326956 SERPINB2P05120 415 aa15.63■□□□□ 0.09
SSBP3-201ENST00000326956 ATF2P15336 505 aa15.63■□□□□ 0.09
SSBP3-201ENST00000326956 ADCY8P40145 1251 aa15.63■□□□□ 0.09
SSBP3-201ENST00000326956 VPS41P49754 854 aa15.63■□□□□ 0.09
SSBP3-201ENST00000326956 CACNB3P54284 484 aa15.63■□□□□ 0.09
SSBP3-201ENST00000326956 UBXN2AP68543 259 aa15.63■□□□□ 0.09
SSBP3-201ENST00000326956 ZFPM1Q8IX07 1006 aa15.63■□□□□ 0.09
SSBP3-201ENST00000326956 GRK7Q8WTQ7 553 aa15.63■□□□□ 0.09
SSBP3-201ENST00000326956 MAIP1Q8WWC4 291 aa15.63■□□□□ 0.09
SSBP3-201ENST00000326956 PCDHB18PQ96TA0 734 aa15.63■□□□□ 0.09
SSBP3-201ENST00000326956 LRRC19Q9H756 370 aa15.63■□□□□ 0.09
SSBP3-201ENST00000326956 CTNNAL1Q9UBT7 734 aa15.63■□□□□ 0.09
SSBP3-201ENST00000326956 ANAPC5Q9UJX4 755 aa15.63■□□□□ 0.09
SSBP3-201ENST00000326956 GDF11O95390 407 aa15.63■□□□□ 0.09
SSBP3-201ENST00000326956 KRT16P08779 473 aa15.63■□□□□ 0.09
SSBP3-201ENST00000326956 MAN1A1P33908 653 aa15.63■□□□□ 0.09
SSBP3-201ENST00000326956 STRN3Q13033 797 aa15.63■□□□□ 0.09
SSBP3-201ENST00000326956 DOK7Q18PE1 504 aa15.63■□□□□ 0.09
SSBP3-201ENST00000326956 CRY2Q49AN0 593 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms