RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 RNF220Q5VTB9 566 aa15.2■□□□□ 0.02
PABPC1-201ENST00000318607 NAF1Q96HR8 494 aaKnown RBP15.2■□□□□ 0.02
PABPC1-201ENST00000318607 ANKRD2Q9GZV1 360 aa15.2■□□□□ 0.02
PABPC1-201ENST00000318607 MYLK2Q9H1R3 596 aa15.2■□□□□ 0.02
PABPC1-201ENST00000318607 TUBP50607 506 aa15.19■□□□□ 0.02
PABPC1-201ENST00000318607 NOP14P78316 857 aaKnown RBP15.19■□□□□ 0.02
PABPC1-201ENST00000318607 IRX4P78413 519 aa15.19■□□□□ 0.02
PABPC1-201ENST00000318607 PPATQ06203 517 aa15.19■□□□□ 0.02
PABPC1-201ENST00000318607 HHATQ5VTY9 493 aa15.19■□□□□ 0.02
PABPC1-201ENST00000318607 ARMCX6Q7L4S7 300 aa15.19■□□□□ 0.02
PABPC1-201ENST00000318607 LRRC37BQ96QE4 947 aa15.19■□□□□ 0.02
PABPC1-201ENST00000318607 RPS6KC1Q96S38 1066 aa15.19■□□□□ 0.02
PABPC1-201ENST00000318607 SAYSD1Q9NPB0 183 aa15.19■□□□□ 0.02
PABPC1-201ENST00000318607 A1CFQ9NQ94 594 aaKnown RBP15.19■□□□□ 0.02
PABPC1-201ENST00000318607 TCEAL9Q9UHQ7 104 aa15.19■□□□□ 0.02
PABPC1-201ENST00000318607 EXOC1LA0A1B0GW35 172 aa15.19■□□□□ 0.02
PABPC1-201ENST00000318607 O00370 1275 aa15.19■□□□□ 0.02
PABPC1-201ENST00000318607 DDX3YO15523 660 aaKnown RBP15.19■□□□□ 0.02
PABPC1-201ENST00000318607 C21orf2O43822 256 aa15.19■□□□□ 0.02
PABPC1-201ENST00000318607 ATF2P15336 505 aa15.19■□□□□ 0.02
PABPC1-201ENST00000318607 NFIAQ12857 509 aa15.19■□□□□ 0.02
PABPC1-201ENST00000318607 TMEM119Q4V9L6 283 aa15.19■□□□□ 0.02
PABPC1-201ENST00000318607 ZFPM1Q8IX07 1006 aa15.19■□□□□ 0.02
PABPC1-201ENST00000318607 SYN2Q92777 582 aaPredicted RBP15.19■□□□□ 0.02
PABPC1-201ENST00000318607 TLCD1Q96CP7 247 aa15.19■□□□□ 0.02
PABPC1-201ENST00000318607 CRAMP1Q96RY5 1269 aa15.19■□□□□ 0.02
PABPC1-201ENST00000318607 ZDHHC18Q9NUE0 388 aa15.19■□□□□ 0.02
PABPC1-201ENST00000318607 GRHL1Q9NZI5 618 aa15.19■□□□□ 0.02
PABPC1-201ENST00000318607 ARL2BPQ9Y2Y0 163 aa15.19■□□□□ 0.02
PABPC1-201ENST00000318607 PHF2O75151 1096 aa15.19■□□□□ 0.02
PABPC1-201ENST00000318607 AGTP01019 485 aa15.19■□□□□ 0.02
PABPC1-201ENST00000318607 ETS1P14921 441 aa15.19■□□□□ 0.02
PABPC1-201ENST00000318607 ZNF564Q8TBZ8 553 aaPredicted RBP15.19■□□□□ 0.02
PABPC1-201ENST00000318607 AGPAT1Q99943 283 aa15.19■□□□□ 0.02
PABPC1-201ENST00000318607 TOPORSQ9NS56 1045 aaPredicted RBP15.19■□□□□ 0.02
PABPC1-201ENST00000318607 KITP10721 976 aa15.18■□□□□ 0.02
PABPC1-201ENST00000318607 KRT10P13645 584 aa15.18■□□□□ 0.02
PABPC1-201ENST00000318607 COILP38432 576 aaPredicted RBP15.18■□□□□ 0.02
PABPC1-201ENST00000318607 LINC00116Q8NCU8 138 aa15.18■□□□□ 0.02
PABPC1-201ENST00000318607 EIF2AK1Q9BQI3 630 aaKnown RBP15.18■□□□□ 0.02
PABPC1-201ENST00000318607 KIAA1683Q9H0B3 1180 aa15.18■□□□□ 0.02
PABPC1-201ENST00000318607 STMN4Q9H169 189 aaPredicted RBP15.18■□□□□ 0.02
PABPC1-201ENST00000318607 NAALADL1Q9UQQ1 740 aa15.18■□□□□ 0.02
PABPC1-201ENST00000318607 KDM3AQ9Y4C1 1321 aa15.18■□□□□ 0.02
PABPC1-201ENST00000318607 ZBTB5O15062 677 aa15.18■□□□□ 0.02
PABPC1-201ENST00000318607 MAP3K13O43283 966 aa15.18■□□□□ 0.02
PABPC1-201ENST00000318607 BMP3P12645 472 aa15.18■□□□□ 0.02
PABPC1-201ENST00000318607 GBP1P32455 592 aa15.18■□□□□ 0.02
PABPC1-201ENST00000318607 SGSM1Q2NKQ1 1148 aa15.18■□□□□ 0.02
PABPC1-201ENST00000318607 SLFN13Q68D06 897 aa15.18■□□□□ 0.02
PABPC1-201ENST00000318607 ECHDC2Q86YB7 292 aa15.18■□□□□ 0.02
PABPC1-201ENST00000318607 VPS52Q8N1B4 723 aa15.18■□□□□ 0.02
PABPC1-201ENST00000318607 UCMAQ8WVF2 138 aa15.18■□□□□ 0.02
PABPC1-201ENST00000318607 CBWD1Q9BRT8 395 aa15.18■□□□□ 0.02
PABPC1-201ENST00000318607 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.18■□□□□ 0.02
PABPC1-201ENST00000318607 SERPINB13Q9UIV8 391 aa15.18■□□□□ 0.02
PABPC1-201ENST00000318607 ZNF148Q9UQR1 794 aa15.18■□□□□ 0.02
PABPC1-201ENST00000318607 ASTN1O14525 1302 aa15.18■□□□□ 0.02
PABPC1-201ENST00000318607 LY75O60449 1722 aa15.18■□□□□ 0.02
PABPC1-201ENST00000318607 KCPQ6ZWJ8 1503 aa15.18■□□□□ 0.02
PABPC1-201ENST00000318607 LRRD1A4D1F6 860 aa15.18■□□□□ 0.02
PABPC1-201ENST00000318607 TTLL1O95922 423 aa15.18■□□□□ 0.02
PABPC1-201ENST00000318607 CETPP11597 493 aa15.18■□□□□ 0.02
PABPC1-201ENST00000318607 CALRP27797 417 aaKnown RBP15.18■□□□□ 0.02
PABPC1-201ENST00000318607 CNGA1P29973 690 aa15.18■□□□□ 0.02
PABPC1-201ENST00000318607 SEPT2Q15019 361 aa15.18■□□□□ 0.02
PABPC1-201ENST00000318607 FRMD5Q7Z6J6 570 aa15.18■□□□□ 0.02
PABPC1-201ENST00000318607 ZNF483Q8TF39 744 aaPredicted RBP15.18■□□□□ 0.02
PABPC1-201ENST00000318607 MCUR1Q96AQ8 359 aa15.18■□□□□ 0.02
PABPC1-201ENST00000318607 DDX4Q9NQI0 724 aaKnown RBP15.18■□□□□ 0.02
PABPC1-201ENST00000318607 TYW1Q9NV66 732 aaKnown RBP15.18■□□□□ 0.02
PABPC1-201ENST00000318607 MARCOQ9UEW3 520 aaPredicted RBP15.18■□□□□ 0.02
PABPC1-201ENST00000318607 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.17■□□□□ 0.02
PABPC1-201ENST00000318607 ZBED4O75132 1171 aa15.17■□□□□ 0.02
PABPC1-201ENST00000318607 CHRNB2P17787 502 aa15.17■□□□□ 0.02
PABPC1-201ENST00000318607 ABL2P42684 1182 aa15.17■□□□□ 0.02
PABPC1-201ENST00000318607 ZNF543Q08ER8 600 aa15.17■□□□□ 0.02
PABPC1-201ENST00000318607 SHCBP1LQ9BZQ2 653 aa15.17■□□□□ 0.02
PABPC1-201ENST00000318607 CD209Q9NNX6 404 aa15.17■□□□□ 0.02
PABPC1-201ENST00000318607 SIX2Q9NPC8 291 aa15.17■□□□□ 0.02
PABPC1-201ENST00000318607 GPRC5CQ9NQ84 441 aa15.17■□□□□ 0.02
PABPC1-201ENST00000318607 R3HDM2Q9Y2K5 976 aaKnown RBP15.17■□□□□ 0.02
PABPC1-201ENST00000318607 SBF2Q86WG5 1849 aa15.17■□□□□ 0.02
PABPC1-201ENST00000318607 PIK3CAP42336 1068 aa15.17■□□□□ 0.02
PABPC1-201ENST00000318607 SLC12A3P55017 1021 aa15.17■□□□□ 0.02
PABPC1-201ENST00000318607 SOX10P56693 466 aa15.17■□□□□ 0.02
PABPC1-201ENST00000318607 ATP13A4Q4VNC1 1196 aa15.17■□□□□ 0.02
PABPC1-201ENST00000318607 TLDC1Q6P9B6 456 aa15.17■□□□□ 0.02
PABPC1-201ENST00000318607 PIGWQ7Z7B1 504 aa15.17■□□□□ 0.02
PABPC1-201ENST00000318607 LMNTD2Q8IXW0 634 aa15.17■□□□□ 0.02
PABPC1-201ENST00000318607 SLC25A41Q8N5S1 370 aa15.17■□□□□ 0.02
PABPC1-201ENST00000318607 DNAJC18Q9H819 358 aa15.17■□□□□ 0.02
PABPC1-201ENST00000318607 TGFB1I1O43294 461 aa15.16■□□□□ 0.02
PABPC1-201ENST00000318607 MAPK4P31152 587 aa15.16■□□□□ 0.02
PABPC1-201ENST00000318607 FOXN2P32314 431 aa15.16■□□□□ 0.02
PABPC1-201ENST00000318607 GPC5P78333 572 aa15.16■□□□□ 0.02
PABPC1-201ENST00000318607 ZNF394Q53GI3 561 aa15.16■□□□□ 0.02
PABPC1-201ENST00000318607 LACTB2Q53H82 288 aaPredicted RBP15.16■□□□□ 0.02
PABPC1-201ENST00000318607 DPH6Q7L8W6 267 aa15.16■□□□□ 0.02
PABPC1-201ENST00000318607 LRRC8CQ8TDW0 803 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 228.6 ms