RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 ART3Q13508 389 aa14.64□□□□□ -0.07
SPAST-201ENST00000315285 GPR162Q16538 588 aa14.64□□□□□ -0.07
SPAST-201ENST00000315285 ANKRD20A4Q4UJ75 823 aa14.64□□□□□ -0.07
SPAST-201ENST00000315285 ANKRD20A8PQ5CZ79 823 aa14.64□□□□□ -0.07
SPAST-201ENST00000315285 ANKRD20A2Q5SQ80 823 aa14.64□□□□□ -0.07
SPAST-201ENST00000315285 ANKRD20A1Q5TYW2 823 aa14.64□□□□□ -0.07
SPAST-201ENST00000315285 ABI1Q8IZP0 508 aa14.64□□□□□ -0.07
SPAST-201ENST00000315285 SLC30A5Q8TAD4 765 aa14.64□□□□□ -0.07
SPAST-201ENST00000315285 EFHD1Q9BUP0 239 aa14.64□□□□□ -0.07
SPAST-201ENST00000315285 AK9Q5TCS8 1911 aa14.64□□□□□ -0.07
SPAST-201ENST00000315285 SPECC1L-ADORA2AF8WAN1 911 aa14.64□□□□□ -0.07
SPAST-201ENST00000315285 HAUS5O94927 633 aa14.64□□□□□ -0.07
SPAST-201ENST00000315285 AGTP01019 485 aa14.64□□□□□ -0.07
SPAST-201ENST00000315285 KLRK1P26718 216 aa14.64□□□□□ -0.07
SPAST-201ENST00000315285 PPP4CP60510 307 aa14.64□□□□□ -0.07
SPAST-201ENST00000315285 CCT8L2Q96SF2 557 aa14.64□□□□□ -0.07
SPAST-201ENST00000315285 ETNK1Q9HBU6 452 aa14.64□□□□□ -0.07
SPAST-201ENST00000315285 KLHL8Q9P2G9 620 aaPredicted RBP14.64□□□□□ -0.07
SPAST-201ENST00000315285 ATF5Q9Y2D1 282 aaPredicted RBP14.64□□□□□ -0.07
SPAST-201ENST00000315285 NEURL4Q96JN8 1562 aa14.64□□□□□ -0.07
SPAST-201ENST00000315285 CFLARO15519 480 aa14.64□□□□□ -0.07
SPAST-201ENST00000315285 LMNAP02545 664 aaKnown RBP14.64□□□□□ -0.07
SPAST-201ENST00000315285 PLEKP08567 350 aaPredicted RBP14.64□□□□□ -0.07
SPAST-201ENST00000315285 HSPA9P38646 679 aaKnown RBP14.64□□□□□ -0.07
SPAST-201ENST00000315285 DUOXA2Q1HG44 320 aa14.64□□□□□ -0.07
SPAST-201ENST00000315285 KLHDC7AQ5VTJ3 777 aa14.64□□□□□ -0.07
SPAST-201ENST00000315285 USP38Q8NB14 1042 aa14.64□□□□□ -0.07
SPAST-201ENST00000315285 BAG5Q9UL15 447 aa14.64□□□□□ -0.07
SPAST-201ENST00000315285 MROH2AA6NES4 1674 aa14.63□□□□□ -0.07
SPAST-201ENST00000315285 SPATA31A1Q5TZJ5 1347 aa14.63□□□□□ -0.07
SPAST-201ENST00000315285 ARSEP51690 589 aa14.63□□□□□ -0.07
SPAST-201ENST00000315285 AP3M2P53677 418 aa14.63□□□□□ -0.07
SPAST-201ENST00000315285 BCAR1P56945 870 aa14.63□□□□□ -0.07
SPAST-201ENST00000315285 STAT4Q14765 748 aa14.63□□□□□ -0.07
SPAST-201ENST00000315285 SEC23AQ15436 765 aa14.63□□□□□ -0.07
SPAST-201ENST00000315285 SERPINI1Q99574 410 aa14.63□□□□□ -0.07
SPAST-201ENST00000315285 JPH1Q9HDC5 661 aaPredicted RBP14.63□□□□□ -0.07
SPAST-201ENST00000315285 KIF20BQ96Q89 1820 aa14.63□□□□□ -0.07
SPAST-201ENST00000315285 H2AFXP16104 143 aaPredicted RBP14.63□□□□□ -0.07
SPAST-201ENST00000315285 SSTR3P32745 418 aaPredicted RBP14.63□□□□□ -0.07
SPAST-201ENST00000315285 ACTN3Q08043 901 aaPredicted RBP14.63□□□□□ -0.07
SPAST-201ENST00000315285 DSTYKQ6XUX3 929 aa14.63□□□□□ -0.07
SPAST-201ENST00000315285 ZNF473Q8WTR7 871 aaKnown RBP14.63□□□□□ -0.07
SPAST-201ENST00000315285 ZNF668Q96K58 619 aaPredicted RBP14.63□□□□□ -0.07
SPAST-201ENST00000315285 ZIM3Q96PE6 472 aa14.63□□□□□ -0.07
SPAST-201ENST00000315285 PNKPQ96T60 521 aa14.63□□□□□ -0.07
SPAST-201ENST00000315285 MKNK1Q9BUB5 465 aa14.63□□□□□ -0.07
SPAST-201ENST00000315285 PSD3Q9NYI0 1048 aa14.63□□□□□ -0.07
SPAST-201ENST00000315285 ARHGEF37A1IGU5 675 aa14.63□□□□□ -0.07
SPAST-201ENST00000315285 S100BP04271 92 aaPredicted RBP14.63□□□□□ -0.07
SPAST-201ENST00000315285 SNRNP35Q16560 246 aaKnown RBP14.63□□□□□ -0.07
SPAST-201ENST00000315285 TAF1BQ53T94 588 aaPredicted RBP14.63□□□□□ -0.07
SPAST-201ENST00000315285 RNF139Q8WU17 664 aa14.63□□□□□ -0.07
SPAST-201ENST00000315285 ATP6V1E2Q96A05 226 aa14.63□□□□□ -0.07
SPAST-201ENST00000315285 SPDL1Q96EA4 605 aa14.63□□□□□ -0.07
SPAST-201ENST00000315285 CYTH2Q99418 400 aa14.63□□□□□ -0.07
SPAST-201ENST00000315285 RPAP3Q9H6T3 665 aaPredicted RBP14.63□□□□□ -0.07
SPAST-201ENST00000315285 EIF3DO15371 548 aaKnown RBP eCLIP14.63□□□□□ -0.07
SPAST-201ENST00000315285 SLC37A4O43826 429 aa14.63□□□□□ -0.07
SPAST-201ENST00000315285 ENTPD3O75355 529 aa14.63□□□□□ -0.07
SPAST-201ENST00000315285 DGAT1O75907 488 aa14.63□□□□□ -0.07
SPAST-201ENST00000315285 TMEM253P0C7T8 217 aa14.63□□□□□ -0.07
SPAST-201ENST00000315285 FGFR2P21802 821 aa14.63□□□□□ -0.07
SPAST-201ENST00000315285 FAM102AQ5T9C2 384 aaPredicted RBP14.63□□□□□ -0.07
SPAST-201ENST00000315285 FBXL16Q8N461 479 aa14.63□□□□□ -0.07
SPAST-201ENST00000315285 PDZD8Q8NEN9 1154 aa14.63□□□□□ -0.07
SPAST-201ENST00000315285 OR2W6PQ8NHA6 318 aa14.63□□□□□ -0.07
SPAST-201ENST00000315285 SPATS2LQ9NUQ6 558 aaKnown RBP14.63□□□□□ -0.07
SPAST-201ENST00000315285 CPSF3Q9UKF6 684 aaKnown RBP14.63□□□□□ -0.07
SPAST-201ENST00000315285 APOBEC2Q9Y235 224 aaKnown RBP14.63□□□□□ -0.07
SPAST-201ENST00000315285 ATP8B3O60423 1300 aa14.62□□□□□ -0.07
SPAST-201ENST00000315285 SPAG7O75391 227 aa14.62□□□□□ -0.07
SPAST-201ENST00000315285 TAP1Q03518 808 aa14.62□□□□□ -0.07
SPAST-201ENST00000315285 GRB10Q13322 594 aa14.62□□□□□ -0.07
SPAST-201ENST00000315285 SKA2Q8WVK7 121 aaPredicted RBP14.62□□□□□ -0.07
SPAST-201ENST00000315285 PNMA3Q9UL41 463 aa14.62□□□□□ -0.07
SPAST-201ENST00000315285 PPLO60437 1756 aa14.62□□□□□ -0.07
SPAST-201ENST00000315285 CFAP73A6NFT4 308 aa14.62□□□□□ -0.07
SPAST-201ENST00000315285 SLC4A1P02730 911 aa14.62□□□□□ -0.07
SPAST-201ENST00000315285 ROR1Q01973 937 aa14.62□□□□□ -0.07
SPAST-201ENST00000315285 MKRN3Q13064 507 aaKnown RBP14.62□□□□□ -0.07
SPAST-201ENST00000315285 SYDE1Q6ZW31 735 aaPredicted RBP14.62□□□□□ -0.07
SPAST-201ENST00000315285 GRAMD1AQ96CP6 724 aa14.62□□□□□ -0.07
SPAST-201ENST00000315285 GJD4Q96KN9 370 aaPredicted RBP14.62□□□□□ -0.07
SPAST-201ENST00000315285 GOLPH3Q9H4A6 298 aa14.62□□□□□ -0.07
SPAST-201ENST00000315285 KIAA0391O15091 583 aaKnown RBP14.62□□□□□ -0.07
SPAST-201ENST00000315285 MDM2Q00987 491 aaPredicted RBP14.62□□□□□ -0.07
SPAST-201ENST00000315285 TRAPPC11Q7Z392 1133 aa14.62□□□□□ -0.07
SPAST-201ENST00000315285 MYLK4Q86YV6 388 aaPredicted RBP14.62□□□□□ -0.07
SPAST-201ENST00000315285 DDX27Q96GQ7 796 aaKnown RBP14.62□□□□□ -0.07
SPAST-201ENST00000315285 ECT2Q9H8V3 914 aa14.62□□□□□ -0.07
SPAST-201ENST00000315285 KBTBD4Q9NVX7 518 aa14.62□□□□□ -0.07
SPAST-201ENST00000315285 LPXNO60711 386 aa14.62□□□□□ -0.07
SPAST-201ENST00000315285 ARFIP2P53365 341 aa14.62□□□□□ -0.07
SPAST-201ENST00000315285 CDKAL1Q5VV42 579 aa14.62□□□□□ -0.07
SPAST-201ENST00000315285 TTI2Q6NXR4 508 aa14.62□□□□□ -0.07
SPAST-201ENST00000315285 CATSPER3Q86XQ3 398 aa14.62□□□□□ -0.07
SPAST-201ENST00000315285 PARP9Q8IXQ6 854 aa14.62□□□□□ -0.07
SPAST-201ENST00000315285 FUT8Q9BYC5 575 aa14.62□□□□□ -0.07
SPAST-201ENST00000315285 ANGPTL3Q9Y5C1 460 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms