RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 GAKO14976 1311 aa15.76■□□□□ 0.11
CCNF-201ENST00000293968 CYP3A7-CYP3A51PA0A087WV96 503 aa15.76■□□□□ 0.11
CCNF-201ENST00000293968 UBAP1LF5GYI3 381 aa15.76■□□□□ 0.11
CCNF-201ENST00000293968 HIP1RO75146 1068 aa15.76■□□□□ 0.11
CCNF-201ENST00000293968 CYP3A7P24462 503 aa15.76■□□□□ 0.11
CCNF-201ENST00000293968 VAMP7P51809 220 aa15.76■□□□□ 0.11
CCNF-201ENST00000293968 ZNF449Q6P9G9 518 aa15.76■□□□□ 0.11
CCNF-201ENST00000293968 PLVAPQ9BX97 442 aa15.76■□□□□ 0.11
CCNF-201ENST00000293968 NENFQ9UMX5 172 aa15.76■□□□□ 0.11
CCNF-201ENST00000293968 PHLPP1O60346 1717 aa15.76■□□□□ 0.11
CCNF-201ENST00000293968 SLITRK3O94933 977 aa15.76■□□□□ 0.11
CCNF-201ENST00000293968 MYCNP04198 464 aaPredicted RBP15.76■□□□□ 0.11
CCNF-201ENST00000293968 BMT2Q1RMZ1 405 aa15.76■□□□□ 0.11
CCNF-201ENST00000293968 ZNF365Q70YC5 407 aa15.76■□□□□ 0.11
CCNF-201ENST00000293968 SLC47A2Q86VL8 602 aa15.76■□□□□ 0.11
CCNF-201ENST00000293968 ERICH1Q86X53 443 aa15.76■□□□□ 0.11
CCNF-201ENST00000293968 WNT8AQ9H1J5 351 aa15.76■□□□□ 0.11
CCNF-201ENST00000293968 TCEAL9Q9UHQ7 104 aa15.76■□□□□ 0.11
CCNF-201ENST00000293968 ARL2BPQ9Y2Y0 163 aa15.76■□□□□ 0.11
CCNF-201ENST00000293968 AFF2P51816 1311 aa15.75■□□□□ 0.11
CCNF-201ENST00000293968 COL22A1Q8NFW1 1626 aaPredicted RBP15.75■□□□□ 0.11
CCNF-201ENST00000293968 TBX3O15119 743 aa15.75■□□□□ 0.11
CCNF-201ENST00000293968 LENG9Q96B70 501 aa15.75■□□□□ 0.11
CCNF-201ENST00000293968 FAM163AQ96GL9 167 aaPredicted RBP15.75■□□□□ 0.11
CCNF-201ENST00000293968 LBHD1Q9BQE6 289 aaPredicted RBP15.75■□□□□ 0.11
CCNF-201ENST00000293968 CBWD1Q9BRT8 395 aa15.75■□□□□ 0.11
CCNF-201ENST00000293968 GPR88Q9GZN0 384 aa15.75■□□□□ 0.11
CCNF-201ENST00000293968 TMX4Q9H1E5 349 aaPredicted RBP15.75■□□□□ 0.11
CCNF-201ENST00000293968 DNAJC18Q9H819 358 aa15.75■□□□□ 0.11
CCNF-201ENST00000293968 POC1B-GALNT4F8VUJ3 575 aa15.75■□□□□ 0.11
CCNF-201ENST00000293968 H0Y3Z8 333 aa15.75■□□□□ 0.11
CCNF-201ENST00000293968 RTN2O75298 545 aa15.75■□□□□ 0.11
CCNF-201ENST00000293968 SERPINB2P05120 415 aa15.75■□□□□ 0.11
CCNF-201ENST00000293968 MXI1P50539 228 aa15.75■□□□□ 0.11
CCNF-201ENST00000293968 ITGA8P53708 1063 aa15.75■□□□□ 0.11
CCNF-201ENST00000293968 SETDB1Q15047 1291 aa15.75■□□□□ 0.11
CCNF-201ENST00000293968 Q4G0T1 1027 aa15.75■□□□□ 0.11
CCNF-201ENST00000293968 FBF1Q8TES7 1133 aa15.75■□□□□ 0.11
CCNF-201ENST00000293968 CCDC17Q96LX7 622 aa15.75■□□□□ 0.11
CCNF-201ENST00000293968 C8orf37Q96NL8 207 aa15.75■□□□□ 0.11
CCNF-201ENST00000293968 PCDHB18PQ96TA0 734 aa15.75■□□□□ 0.11
CCNF-201ENST00000293968 ZNF577Q9BSK1 485 aa15.75■□□□□ 0.11
CCNF-201ENST00000293968 PITPNM3Q9BZ71 974 aa15.75■□□□□ 0.11
CCNF-201ENST00000293968 ANAPC7Q9UJX3 599 aa15.75■□□□□ 0.11
CCNF-201ENST00000293968 RREB1Q92766 1687 aa15.75■□□□□ 0.11
CCNF-201ENST00000293968 EIF3DO15371 548 aaKnown RBP eCLIP15.75■□□□□ 0.11
CCNF-201ENST00000293968 NDUFB10O96000 172 aa15.75■□□□□ 0.11
CCNF-201ENST00000293968 SREBF1P36956 1147 aa15.75■□□□□ 0.11
CCNF-201ENST00000293968 PPP3CAQ08209 521 aa15.75■□□□□ 0.11
CCNF-201ENST00000293968 MIGA2Q7L4E1 593 aa15.75■□□□□ 0.11
CCNF-201ENST00000293968 CERS5Q8N5B7 392 aa15.75■□□□□ 0.11
CCNF-201ENST00000293968 VAV3Q9UKW4 847 aa15.75■□□□□ 0.11
CCNF-201ENST00000293968 ZMYM2Q9UBW7 1377 aa15.74■□□□□ 0.11
CCNF-201ENST00000293968 BHMG1C9JSJ3 638 aaPredicted RBP15.74■□□□□ 0.11
CCNF-201ENST00000293968 GAS8O95995 478 aa15.74■□□□□ 0.11
CCNF-201ENST00000293968 MSH2P43246 934 aa15.74■□□□□ 0.11
CCNF-201ENST00000293968 SPDYCQ5MJ68 293 aa15.74■□□□□ 0.11
CCNF-201ENST00000293968 DAB2IPQ5VWQ8 1189 aa15.74■□□□□ 0.11
CCNF-201ENST00000293968 C1orf186Q6ZWK4 172 aa15.74■□□□□ 0.11
CCNF-201ENST00000293968 MAGEC3Q8TD91 643 aa15.74■□□□□ 0.11
CCNF-201ENST00000293968 NGLY1Q96IV0 654 aa15.74■□□□□ 0.11
CCNF-201ENST00000293968 NACC1Q96RE7 527 aa15.74■□□□□ 0.11
CCNF-201ENST00000293968 CCDC77Q9BR77 488 aa15.74■□□□□ 0.11
CCNF-201ENST00000293968 POLR3CQ9BUI4 534 aaPredicted RBP15.74■□□□□ 0.11
CCNF-201ENST00000293968 PCYOX1Q9UHG3 505 aa15.74■□□□□ 0.11
CCNF-201ENST00000293968 MAPK4P31152 587 aa15.74■□□□□ 0.11
CCNF-201ENST00000293968 SSTR3P32745 418 aaPredicted RBP15.74■□□□□ 0.11
CCNF-201ENST00000293968 DRG2P55039 364 aaKnown RBP15.74■□□□□ 0.11
CCNF-201ENST00000293968 TAF11Q15544 211 aa15.74■□□□□ 0.11
CCNF-201ENST00000293968 RBM26Q5T8P6 1007 aaKnown RBP15.74■□□□□ 0.11
CCNF-201ENST00000293968 NAIF1Q69YI7 327 aaPredicted RBP15.74■□□□□ 0.11
CCNF-201ENST00000293968 NOP9Q86U38 636 aaKnown RBP15.74■□□□□ 0.11
CCNF-201ENST00000293968 DCAF4Q8WV16 495 aa15.74■□□□□ 0.11
CCNF-201ENST00000293968 LXNQ9BS40 222 aa15.74■□□□□ 0.11
CCNF-201ENST00000293968 CHST7Q9NS84 486 aa15.74■□□□□ 0.11
CCNF-201ENST00000293968 STK24Q9Y6E0 443 aa15.74■□□□□ 0.11
CCNF-201ENST00000293968 BMP3P12645 472 aa15.74■□□□□ 0.11
CCNF-201ENST00000293968 BTNL9Q6UXG8 535 aa15.74■□□□□ 0.11
CCNF-201ENST00000293968 PRUNE1Q86TP1 453 aa15.74■□□□□ 0.11
CCNF-201ENST00000293968 CCHCR1Q8TD31 782 aa15.74■□□□□ 0.11
CCNF-201ENST00000293968 BORCS6Q96GS4 357 aa15.74■□□□□ 0.11
CCNF-201ENST00000293968 RMDN2Q96LZ7 410 aa15.74■□□□□ 0.11
CCNF-201ENST00000293968 MKNK1Q9BUB5 465 aa15.74■□□□□ 0.11
CCNF-201ENST00000293968 DBNDD1Q9H9R9 158 aa15.74■□□□□ 0.11
CCNF-201ENST00000293968 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.74■□□□□ 0.11
CCNF-201ENST00000293968 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.73■□□□□ 0.11
CCNF-201ENST00000293968 RASA4BC9J798 803 aa15.73■□□□□ 0.11
CCNF-201ENST00000293968 RASA4O43374 803 aa15.73■□□□□ 0.11
CCNF-201ENST00000293968 UPP2O95045 317 aa15.73■□□□□ 0.11
CCNF-201ENST00000293968 KRT15P19012 456 aa15.73■□□□□ 0.11
CCNF-201ENST00000293968 ABCB5Q2M3G0 1257 aa15.73■□□□□ 0.11
CCNF-201ENST00000293968 FITM2Q8N6M3 262 aa15.73■□□□□ 0.11
CCNF-201ENST00000293968 ZSWIM2Q8NEG5 633 aa15.73■□□□□ 0.11
CCNF-201ENST00000293968 ART4Q93070 314 aa15.73■□□□□ 0.11
CCNF-201ENST00000293968 SAAL1Q96ER3 474 aa15.73■□□□□ 0.11
CCNF-201ENST00000293968 SPATA31A5Q5VU36 1347 aa15.73■□□□□ 0.11
CCNF-201ENST00000293968 SPATA31A7Q8IWB4 1347 aa15.73■□□□□ 0.11
CCNF-201ENST00000293968 PCK1P35558 622 aa15.73■□□□□ 0.11
CCNF-201ENST00000293968 NOVP48745 357 aa15.73■□□□□ 0.11
CCNF-201ENST00000293968 RRP1BQ14684 758 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms