RNA–Protein interactions for RNA: ENST00000288986.6

NCK1-201, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK1, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-201ENST00000288986 TCHPQ9BT92 498 aa16.84■□□□□ 0.29
NCK1-201ENST00000288986 FAM105AQ9NUU6 356 aa16.84■□□□□ 0.29
NCK1-201ENST00000288986 LRFN2Q9ULH4 789 aa16.84■□□□□ 0.29
NCK1-201ENST00000288986 PCDHB7Q9Y5E2 793 aa16.84■□□□□ 0.29
NCK1-201ENST00000288986 A0A0U1RQF3 1178 aa16.83■□□□□ 0.28
NCK1-201ENST00000288986 C9IYK1 514 aa16.83■□□□□ 0.28
NCK1-201ENST00000288986 ATP1A3P13637 1013 aa16.83■□□□□ 0.28
NCK1-201ENST00000288986 KLHL10Q6JEL2 608 aa16.83■□□□□ 0.28
NCK1-201ENST00000288986 SLC27A1Q6PCB7 646 aa16.83■□□□□ 0.28
NCK1-201ENST00000288986 RNF169Q8NCN4 708 aa16.83■□□□□ 0.28
NCK1-201ENST00000288986 DHTKD1Q96HY7 919 aaPredicted RBP16.83■□□□□ 0.28
NCK1-201ENST00000288986 ACO2Q99798 780 aaKnown RBP16.83■□□□□ 0.28
NCK1-201ENST00000288986 ZBED2Q9BTP6 218 aa16.83■□□□□ 0.28
NCK1-201ENST00000288986 CTNND2Q9UQB3 1225 aa16.83■□□□□ 0.28
NCK1-201ENST00000288986 HNRNPDLO14979 420 aaKnown RBP16.82■□□□□ 0.28
NCK1-201ENST00000288986 N4BP3O15049 544 aa16.82■□□□□ 0.28
NCK1-201ENST00000288986 KCNA1Q09470 495 aa16.82■□□□□ 0.28
NCK1-201ENST00000288986 CDKAL1Q5VV42 579 aa16.82■□□□□ 0.28
NCK1-201ENST00000288986 FAM109BQ6ICB4 259 aaPredicted RBP16.82■□□□□ 0.28
NCK1-201ENST00000288986 STXBP4Q6ZWJ1 553 aa16.82■□□□□ 0.28
NCK1-201ENST00000288986 GLIS3Q8NEA6 775 aa16.82■□□□□ 0.28
NCK1-201ENST00000288986 NELFBQ8WX92 580 aa16.82■□□□□ 0.28
NCK1-201ENST00000288986 CCDC51Q96ER9 411 aa16.82■□□□□ 0.28
NCK1-201ENST00000288986 ADPGKQ9BRR6 497 aa16.82■□□□□ 0.28
NCK1-201ENST00000288986 TRAIPQ9BWF2 469 aa16.82■□□□□ 0.28
NCK1-201ENST00000288986 EIF2AQ9BY44 585 aaKnown RBP16.82■□□□□ 0.28
NCK1-201ENST00000288986 PDZD7Q9H5P4 517 aa16.82■□□□□ 0.28
NCK1-201ENST00000288986 PCDHB2Q9Y5E7 798 aa16.82■□□□□ 0.28
NCK1-201ENST00000288986 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.82■□□□□ 0.28
NCK1-201ENST00000288986 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.82■□□□□ 0.28
NCK1-201ENST00000288986 A0A1W2PPC1 479 aa16.82■□□□□ 0.28
NCK1-201ENST00000288986 GRXCR1A8MXD5 290 aa16.82■□□□□ 0.28
NCK1-201ENST00000288986 PRPF6O94906 941 aaKnown RBP16.82■□□□□ 0.28
NCK1-201ENST00000288986 STAG3L1P0CL83 205 aa16.82■□□□□ 0.28
NCK1-201ENST00000288986 SKIP12755 728 aa16.82■□□□□ 0.28
NCK1-201ENST00000288986 LIG4P49917 911 aa16.82■□□□□ 0.28
NCK1-201ENST00000288986 RAB27AP51159 221 aa16.82■□□□□ 0.28
NCK1-201ENST00000288986 FAM189BP81408 668 aa16.82■□□□□ 0.28
NCK1-201ENST00000288986 FANCCQ00597 558 aa16.82■□□□□ 0.28
NCK1-201ENST00000288986 ALCAMQ13740 583 aa16.82■□□□□ 0.28
NCK1-201ENST00000288986 ECHDC2Q86YB7 292 aa16.82■□□□□ 0.28
NCK1-201ENST00000288986 MAP4K3Q8IVH8 894 aa16.82■□□□□ 0.28
NCK1-201ENST00000288986 KCNN1Q92952 543 aa16.82■□□□□ 0.28
NCK1-201ENST00000288986 STRA6Q9BX79 667 aa16.82■□□□□ 0.28
NCK1-201ENST00000288986 RNF216Q9NWF9 866 aaPredicted RBP16.82■□□□□ 0.28
NCK1-201ENST00000288986 TNFSF13BQ9Y275 285 aa16.82■□□□□ 0.28
NCK1-201ENST00000288986 MICAL3Q7RTP6 2002 aa16.81■□□□□ 0.28
NCK1-201ENST00000288986 PSMA7O14818 248 aa16.81■□□□□ 0.28
NCK1-201ENST00000288986 PPP1R37O75864 691 aa16.81■□□□□ 0.28
NCK1-201ENST00000288986 NPTXRO95502 500 aa16.81■□□□□ 0.28
NCK1-201ENST00000288986 MATR3P43243 847 aaKnown RBP eCLIP16.81■□□□□ 0.282e-6■■□□□ 13.4
NCK1-201ENST00000288986 STX17P56962 302 aa16.81■□□□□ 0.28
NCK1-201ENST00000288986 STIM1Q13586 685 aa16.81■□□□□ 0.28
NCK1-201ENST00000288986 UBXN11Q5T124 520 aa16.81■□□□□ 0.28
NCK1-201ENST00000288986 EEF1DP3Q658K8 133 aa16.81■□□□□ 0.28
NCK1-201ENST00000288986 FOXR2Q6PJQ5 311 aa16.81■□□□□ 0.28
NCK1-201ENST00000288986 ZPBP2Q6X784 338 aa16.81■□□□□ 0.28
NCK1-201ENST00000288986 NPAS4Q8IUM7 802 aa16.81■□□□□ 0.28
NCK1-201ENST00000288986 HERC6Q8IVU3 1022 aa16.81■□□□□ 0.28
NCK1-201ENST00000288986 SYCP3Q8IZU3 236 aa16.81■□□□□ 0.28
NCK1-201ENST00000288986 HVCN1Q96D96 273 aa16.81■□□□□ 0.28
NCK1-201ENST00000288986 ACCSQ96QU6 501 aa16.81■□□□□ 0.28
NCK1-201ENST00000288986 SAMSN1Q9NSI8 373 aaKnown RBP16.81■□□□□ 0.28
NCK1-201ENST00000288986 TMEM161AQ9NX61 479 aa16.81■□□□□ 0.28
NCK1-201ENST00000288986 ANKFY1Q9P2R3 1169 aa16.81■□□□□ 0.28
NCK1-201ENST00000288986 EXOC7Q9UPT5 735 aa16.81■□□□□ 0.28
NCK1-201ENST00000288986 TOM1L1O75674 476 aa16.8■□□□□ 0.28
NCK1-201ENST00000288986 GJB5O95377 273 aa16.8■□□□□ 0.28
NCK1-201ENST00000288986 EOMESO95936 686 aa16.8■□□□□ 0.28
NCK1-201ENST00000288986 TTI2Q6NXR4 508 aa16.8■□□□□ 0.28
NCK1-201ENST00000288986 ZBTB33Q86T24 672 aa16.8■□□□□ 0.28
NCK1-201ENST00000288986 GUF1Q8N442 669 aaKnown RBP16.8■□□□□ 0.28
NCK1-201ENST00000288986 ZBTB45Q96K62 511 aaPredicted RBP16.8■□□□□ 0.28
NCK1-201ENST00000288986 ELAC1Q9H777 363 aaKnown RBP16.8■□□□□ 0.28
NCK1-201ENST00000288986 TMEM206Q9H813 350 aa16.8■□□□□ 0.28
NCK1-201ENST00000288986 MAPK8IP1Q9UQF2 711 aa16.8■□□□□ 0.28
NCK1-201ENST00000288986 CLDN3O15551 220 aa16.8■□□□□ 0.28
NCK1-201ENST00000288986 TLL1O43897 1013 aa16.8■□□□□ 0.28
NCK1-201ENST00000288986 ZNF623O75123 536 aa16.8■□□□□ 0.28
NCK1-201ENST00000288986 CCNE1P24864 410 aa16.8■□□□□ 0.28
NCK1-201ENST00000288986 RABGGTBP53611 331 aa16.8■□□□□ 0.28
NCK1-201ENST00000288986 PMS1P54277 932 aaKnown RBP16.8■□□□□ 0.28
NCK1-201ENST00000288986 ZNF568Q3ZCX4 644 aa16.8■□□□□ 0.28
NCK1-201ENST00000288986 APTXQ7Z2E3 356 aaKnown RBP16.8■□□□□ 0.28
NCK1-201ENST00000288986 CRIPAKQ8N1N5 446 aa16.8■□□□□ 0.28
NCK1-201ENST00000288986 TRIM44Q96DX7 344 aaPredicted RBP16.8■□□□□ 0.28
NCK1-201ENST00000288986 XPO4Q9C0E2 1151 aaKnown RBP16.8■□□□□ 0.28
NCK1-201ENST00000288986 PTPRHQ9HD43 1115 aa16.8■□□□□ 0.28
NCK1-201ENST00000288986 HES2Q9Y543 173 aa16.8■□□□□ 0.28
NCK1-201ENST00000288986 IPPQ9Y573 584 aa16.8■□□□□ 0.28
NCK1-201ENST00000288986 TRIOBPQ9H2D6 2365 aa16.79■□□□□ 0.28
NCK1-201ENST00000288986 EIF3DO15371 548 aaKnown RBP eCLIP16.79■□□□□ 0.28
NCK1-201ENST00000288986 HARSP12081 509 aaKnown RBP16.79■□□□□ 0.28
NCK1-201ENST00000288986 CENPPQ6IPU0 288 aa16.79■□□□□ 0.28
NCK1-201ENST00000288986 MPZL3Q6UWV2 235 aa16.79■□□□□ 0.28
NCK1-201ENST00000288986 EPM2AIP1Q7L775 607 aaPredicted RBP16.79■□□□□ 0.28
NCK1-201ENST00000288986 APBB1IPQ7Z5R6 666 aaPredicted RBP16.79■□□□□ 0.28
NCK1-201ENST00000288986 NELFCDQ8IXH7 590 aa16.79■□□□□ 0.28
NCK1-201ENST00000288986 SMG8Q8ND04 991 aaKnown RBP16.79■□□□□ 0.28
NCK1-201ENST00000288986 ZNF507Q8TCN5 953 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms