RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 INTS4Q96HW7 963 aaKnown RBP15.93■□□□□ 0.14
HMGN3-201ENST00000275036 CITO14578 2027 aa15.92■□□□□ 0.14
HMGN3-201ENST00000275036 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.92■□□□□ 0.14
HMGN3-201ENST00000275036 LOC730098B7Z3J9 87 aa15.92■□□□□ 0.14
HMGN3-201ENST00000275036 ACKR2O00590 384 aa15.92■□□□□ 0.14
HMGN3-201ENST00000275036 CXCL14O95715 111 aa15.92■□□□□ 0.14
HMGN3-201ENST00000275036 EFEMP2O95967 443 aa15.92■□□□□ 0.14
HMGN3-201ENST00000275036 LIG1P18858 919 aa15.92■□□□□ 0.14
HMGN3-201ENST00000275036 PDCP20941 246 aa15.92■□□□□ 0.14
HMGN3-201ENST00000275036 DSC1Q08554 894 aa15.92■□□□□ 0.14
HMGN3-201ENST00000275036 PRPF4BQ13523 1007 aaKnown RBP15.92■□□□□ 0.14
HMGN3-201ENST00000275036 PPP2R5AQ15172 486 aa15.92■□□□□ 0.14
HMGN3-201ENST00000275036 PTPN14Q15678 1187 aa15.92■□□□□ 0.14
HMGN3-201ENST00000275036 MAPK6Q16659 721 aa15.92■□□□□ 0.14
HMGN3-201ENST00000275036 TMEM119Q4V9L6 283 aa15.92■□□□□ 0.14
HMGN3-201ENST00000275036 NT5DC1Q5TFE4 455 aa15.92■□□□□ 0.14
HMGN3-201ENST00000275036 EEF1DP3Q658K8 133 aa15.92■□□□□ 0.14
HMGN3-201ENST00000275036 KANK3Q6NY19 840 aa15.92■□□□□ 0.14
HMGN3-201ENST00000275036 FAM173BQ6P4H8 233 aa15.92■□□□□ 0.14
HMGN3-201ENST00000275036 RNF135Q8IUD6 432 aa15.92■□□□□ 0.14
HMGN3-201ENST00000275036 IFT74Q96LB3 600 aa15.92■□□□□ 0.14
HMGN3-201ENST00000275036 TMEM175Q9BSA9 504 aa15.92■□□□□ 0.14
HMGN3-201ENST00000275036 TRIM6Q9C030 488 aaPredicted RBP15.92■□□□□ 0.14
HMGN3-201ENST00000275036 CXCL16Q9H2A7 254 aa15.92■□□□□ 0.14
HMGN3-201ENST00000275036 UBN1Q9NPG3 1134 aa15.92■□□□□ 0.14
HMGN3-201ENST00000275036 KANSL3Q9P2N6 904 aa15.92■□□□□ 0.14
HMGN3-201ENST00000275036 MUTYHQ9UIF7 546 aa15.92■□□□□ 0.14
HMGN3-201ENST00000275036 IRAK3Q9Y616 596 aa15.92■□□□□ 0.14
HMGN3-201ENST00000275036 CLIC4Q9Y696 253 aa15.92■□□□□ 0.14
HMGN3-201ENST00000275036 FSD2A1L4K1 749 aa15.91■□□□□ 0.14
HMGN3-201ENST00000275036 DCXO43602 365 aa15.91■□□□□ 0.14
HMGN3-201ENST00000275036 SSBP05455 408 aaKnown RBP eCLIP15.91■□□□□ 0.14
HMGN3-201ENST00000275036 EPCAMP16422 314 aa15.91■□□□□ 0.14
HMGN3-201ENST00000275036 CA8P35219 290 aa15.91■□□□□ 0.14
HMGN3-201ENST00000275036 NPTX2P47972 431 aa15.91■□□□□ 0.14
HMGN3-201ENST00000275036 SLC12A3P55017 1021 aa15.91■□□□□ 0.14
HMGN3-201ENST00000275036 PEX3P56589 373 aa15.91■□□□□ 0.14
HMGN3-201ENST00000275036 CBX2Q14781 532 aaPredicted RBP15.91■□□□□ 0.14
HMGN3-201ENST00000275036 TAS1R3Q7RTX0 852 aa15.91■□□□□ 0.14
HMGN3-201ENST00000275036 TAS1R1Q7RTX1 841 aa15.91■□□□□ 0.14
HMGN3-201ENST00000275036 CABP7Q86V35 215 aa15.91■□□□□ 0.14
HMGN3-201ENST00000275036 RNF168Q8IYW5 571 aaPredicted RBP15.91■□□□□ 0.14
HMGN3-201ENST00000275036 SYT2Q8N9I0 419 aaPredicted RBP15.91■□□□□ 0.14
HMGN3-201ENST00000275036 KLK14Q9P0G3 267 aa15.91■□□□□ 0.14
HMGN3-201ENST00000275036 CACNG4Q9UBN1 327 aa15.91■□□□□ 0.14
HMGN3-201ENST00000275036 MTMR6Q9Y217 621 aa15.91■□□□□ 0.14
HMGN3-201ENST00000275036 GIT1Q9Y2X7 761 aa15.91■□□□□ 0.14
HMGN3-201ENST00000275036 PRG3Q9Y2Y8 225 aaPredicted RBP15.91■□□□□ 0.14
HMGN3-201ENST00000275036 SFI1A8K8P3 1242 aa15.9■□□□□ 0.14
HMGN3-201ENST00000275036 N4BP3O15049 544 aa15.9■□□□□ 0.14
HMGN3-201ENST00000275036 LILRB3O75022 631 aa15.9■□□□□ 0.14
HMGN3-201ENST00000275036 PLA2G4BP0C869 781 aa15.9■□□□□ 0.14
HMGN3-201ENST00000275036 GUCY2CP25092 1073 aa15.9■□□□□ 0.14
HMGN3-201ENST00000275036 RAD51AP2Q09MP3 1159 aa15.9■□□□□ 0.14
HMGN3-201ENST00000275036 PTPAQ15257 358 aa15.9■□□□□ 0.14
HMGN3-201ENST00000275036 SLC22A17Q8WUG5 538 aa15.9■□□□□ 0.14
HMGN3-201ENST00000275036 SNX21Q969T3 373 aa15.9■□□□□ 0.14
HMGN3-201ENST00000275036 AK8Q96MA6 479 aa15.9■□□□□ 0.14
HMGN3-201ENST00000275036 FAM193BQ96PV7 902 aaPredicted RBP15.9■□□□□ 0.14
HMGN3-201ENST00000275036 POP1Q99575 1024 aaKnown RBP15.9■□□□□ 0.14
HMGN3-201ENST00000275036 PHF7Q9BWX1 381 aaPredicted RBP15.9■□□□□ 0.14
HMGN3-201ENST00000275036 NT5C3AQ9H0P0 336 aa15.9■□□□□ 0.14
HMGN3-201ENST00000275036 SNTG2Q9NY99 539 aa15.9■□□□□ 0.14
HMGN3-201ENST00000275036 PARP2Q9UGN5 583 aa15.9■□□□□ 0.14
HMGN3-201ENST00000275036 FAN1Q9Y2M0 1017 aa15.9■□□□□ 0.14
HMGN3-201ENST00000275036 PLXNA3P51805 1871 aa15.9■□□□□ 0.14
HMGN3-201ENST00000275036 PDCD11Q14690 1871 aaKnown RBP15.89■□□□□ 0.13
HMGN3-201ENST00000275036 NPHP3-ACAD11A0A0J9YXS1 232 aa15.89■□□□□ 0.13
HMGN3-201ENST00000275036 CCDC169A6NNP5 214 aa15.89■□□□□ 0.13
HMGN3-201ENST00000275036 BMP15O95972 392 aa15.89■□□□□ 0.13
HMGN3-201ENST00000275036 ALDH2P05091 517 aa15.89■□□□□ 0.13
HMGN3-201ENST00000275036 WEE2P0C1S8 567 aa15.89■□□□□ 0.13
HMGN3-201ENST00000275036 ALADP13716 330 aa15.89■□□□□ 0.13
HMGN3-201ENST00000275036 OR1G1P47890 313 aa15.89■□□□□ 0.13
HMGN3-201ENST00000275036 EFNA5P52803 228 aa15.89■□□□□ 0.13
HMGN3-201ENST00000275036 ARSHQ5FYA8 562 aa15.89■□□□□ 0.13
HMGN3-201ENST00000275036 HERC4Q5GLZ8 1057 aaPredicted RBP15.89■□□□□ 0.13
HMGN3-201ENST00000275036 C12orf76Q8N812 135 aaPredicted RBP15.89■□□□□ 0.13
HMGN3-201ENST00000275036 RABGGTAQ92696 567 aa15.89■□□□□ 0.13
HMGN3-201ENST00000275036 CASP10Q92851 521 aa15.89■□□□□ 0.13
HMGN3-201ENST00000275036 CDK5RAP3Q96JB5 506 aa15.89■□□□□ 0.13
HMGN3-201ENST00000275036 RPGRIP1Q96KN7 1286 aa15.89■□□□□ 0.13
HMGN3-201ENST00000275036 BLOC1S4Q9NUP1 217 aa15.89■□□□□ 0.13
HMGN3-201ENST00000275036 ARHGAP28Q9P2N2 729 aa15.89■□□□□ 0.13
HMGN3-201ENST00000275036 VWA8A3KMH1 1905 aa15.89■□□□□ 0.13
HMGN3-201ENST00000275036 ZMYM2Q9UBW7 1377 aa15.88■□□□□ 0.13
HMGN3-201ENST00000275036 CARNS1A5YM72 827 aa15.88■□□□□ 0.13
HMGN3-201ENST00000275036 K7ERI5 159 aa15.88■□□□□ 0.13
HMGN3-201ENST00000275036 PTGESO14684 152 aa15.88■□□□□ 0.13
HMGN3-201ENST00000275036 SOD2P04179 222 aa15.88■□□□□ 0.13
HMGN3-201ENST00000275036 CNPP09543 421 aaKnown RBP15.88■□□□□ 0.13
HMGN3-201ENST00000275036 SRGAP2BP0DMP2 458 aa15.88■□□□□ 0.13
HMGN3-201ENST00000275036 SP100P23497 879 aaPredicted RBP15.88■□□□□ 0.13
HMGN3-201ENST00000275036 MARCKSP29966 332 aaPredicted RBP15.88■□□□□ 0.13
HMGN3-201ENST00000275036 LONP1P36776 959 aaKnown RBP15.88■□□□□ 0.13
HMGN3-201ENST00000275036 CACNB1Q02641 598 aaPredicted RBP15.88■□□□□ 0.13
HMGN3-201ENST00000275036 DMP1Q13316 513 aaPredicted RBP15.88■□□□□ 0.13
HMGN3-201ENST00000275036 KARSQ15046 597 aaKnown RBP15.88■□□□□ 0.13
HMGN3-201ENST00000275036 TMEM132AQ24JP5 1023 aa15.88■□□□□ 0.13
HMGN3-201ENST00000275036 SPECC1Q5M775 1068 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms