RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 EDRF1Q3B7T1 1238 aa15.62■□□□□ 0.09
SSBP1-201ENST00000265304 CAVIN1Q6NZI2 390 aaKnown RBP15.62■□□□□ 0.09
SSBP1-201ENST00000265304 APBB1IPQ7Z5R6 666 aaPredicted RBP15.62■□□□□ 0.09
SSBP1-201ENST00000265304 SMG8Q8ND04 991 aaKnown RBP15.62■□□□□ 0.09
SSBP1-201ENST00000265304 TOP1MTQ969P6 601 aa15.62■□□□□ 0.09
SSBP1-201ENST00000265304 CPB2Q96IY4 423 aa15.62■□□□□ 0.09
SSBP1-201ENST00000265304 ZBTB45Q96K62 511 aaPredicted RBP15.62■□□□□ 0.09
SSBP1-201ENST00000265304 FUCA2Q9BTY2 467 aa15.62■□□□□ 0.09
SSBP1-201ENST00000265304 CDT1Q9H211 546 aa15.62■□□□□ 0.09
SSBP1-201ENST00000265304 SEMA6BQ9H3T3 888 aa15.62■□□□□ 0.09
SSBP1-201ENST00000265304 FAM105AQ9NUU6 356 aa15.62■□□□□ 0.09
SSBP1-201ENST00000265304 TYW1Q9NV66 732 aaKnown RBP15.62■□□□□ 0.09
SSBP1-201ENST00000265304 TMEM161AQ9NX61 479 aa15.62■□□□□ 0.09
SSBP1-201ENST00000265304 USP20Q9Y2K6 914 aa15.62■□□□□ 0.09
SSBP1-201ENST00000265304 PCDHB2Q9Y5E7 798 aa15.62■□□□□ 0.09
SSBP1-201ENST00000265304 COL4A6Q14031 1691 aa15.62■□□□□ 0.09
SSBP1-201ENST00000265304 TDRD15B5MCY1 1934 aaKnown RBP15.61■□□□□ 0.09
SSBP1-201ENST00000265304 MYO9BQ13459 2157 aa15.61■□□□□ 0.09
SSBP1-201ENST00000265304 CAPN15O75808 1086 aa15.61■□□□□ 0.09
SSBP1-201ENST00000265304 LIG4P49917 911 aa15.61■□□□□ 0.09
SSBP1-201ENST00000265304 WDR5P61964 334 aaKnown RBP15.61■□□□□ 0.09
SSBP1-201ENST00000265304 XKR4Q5GH76 650 aa15.61■□□□□ 0.09
SSBP1-201ENST00000265304 TWF2Q6IBS0 349 aaKnown RBP15.61■□□□□ 0.09
SSBP1-201ENST00000265304 ECHDC2Q86YB7 292 aa15.61■□□□□ 0.09
SSBP1-201ENST00000265304 SMYD4Q8IYR2 804 aaPredicted RBP15.61■□□□□ 0.09
SSBP1-201ENST00000265304 MED15Q96RN5 788 aa15.61■□□□□ 0.09
SSBP1-201ENST00000265304 EIF2AQ9BY44 585 aaKnown RBP15.61■□□□□ 0.09
SSBP1-201ENST00000265304 IKZF4Q9H2S9 585 aa15.61■□□□□ 0.09
SSBP1-201ENST00000265304 AGPAT3Q9NRZ7 376 aa15.61■□□□□ 0.09
SSBP1-201ENST00000265304 BIN1O00499 593 aa15.6■□□□□ 0.09
SSBP1-201ENST00000265304 MAPK13O15264 365 aa15.6■□□□□ 0.09
SSBP1-201ENST00000265304 OGTO15294 1046 aa15.6■□□□□ 0.09
SSBP1-201ENST00000265304 CCNE1P24864 410 aa15.6■□□□□ 0.09
SSBP1-201ENST00000265304 ERCC5P28715 1186 aaPredicted RBP15.6■□□□□ 0.09
SSBP1-201ENST00000265304 GRM5P41594 1212 aa15.6■□□□□ 0.09
SSBP1-201ENST00000265304 LRRC63Q05C16 580 aa15.6■□□□□ 0.09
SSBP1-201ENST00000265304 NOLC1Q14978 699 aaKnown RBP eCLIP15.6■□□□□ 0.09
SSBP1-201ENST00000265304 ALKAL1Q6UXT8 129 aa15.6■□□□□ 0.09
SSBP1-201ENST00000265304 HS2ST1Q7LGA3 356 aa15.6■□□□□ 0.09
SSBP1-201ENST00000265304 NPAS4Q8IUM7 802 aa15.6■□□□□ 0.09
SSBP1-201ENST00000265304 SYCP3Q8IZU3 236 aa15.6■□□□□ 0.09
SSBP1-201ENST00000265304 ADPGKQ9BRR6 497 aa15.6■□□□□ 0.09
SSBP1-201ENST00000265304 RC3H2Q9HBD1 1191 aaKnown RBP15.6■□□□□ 0.09
SSBP1-201ENST00000265304 IPPQ9Y573 584 aa15.6■□□□□ 0.09
SSBP1-201ENST00000265304 LAMA2P24043 3122 aaKnown RBP15.59■□□□□ 0.09
SSBP1-201ENST00000265304 GBF1Q92538 1859 aa15.59■□□□□ 0.09
SSBP1-201ENST00000265304 A0A1W2PPC1 479 aa15.59■□□□□ 0.09
SSBP1-201ENST00000265304 TISP43B9A030 160 aa15.59■□□□□ 0.09
SSBP1-201ENST00000265304 PSMA7O14818 248 aa15.59■□□□□ 0.09
SSBP1-201ENST00000265304 LDHAP00338 332 aaKnown RBP15.59■□□□□ 0.09
SSBP1-201ENST00000265304 CLTAP09496 248 aa15.59■□□□□ 0.09
SSBP1-201ENST00000265304 HTRA4P83105 476 aaPredicted RBP15.59■□□□□ 0.09
SSBP1-201ENST00000265304 ENPEPQ07075 957 aa15.59■□□□□ 0.09
SSBP1-201ENST00000265304 STIM1Q13586 685 aa15.59■□□□□ 0.09
SSBP1-201ENST00000265304 HSP90AA2PQ14568 343 aaPredicted RBP15.59■□□□□ 0.09
SSBP1-201ENST00000265304 SHHQ15465 462 aa15.59■□□□□ 0.09
SSBP1-201ENST00000265304 ZNF568Q3ZCX4 644 aa15.59■□□□□ 0.09
SSBP1-201ENST00000265304 TTI2Q6NXR4 508 aa15.59■□□□□ 0.09
SSBP1-201ENST00000265304 CRELD2Q6UXH1 353 aaPredicted RBP15.59■□□□□ 0.09
SSBP1-201ENST00000265304 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.59■□□□□ 0.096e-8■■■■■ 39.5
SSBP1-201ENST00000265304 AGMOQ6ZNB7 445 aa15.59■□□□□ 0.09
SSBP1-201ENST00000265304 OTOP2Q7RTS6 562 aa15.59■□□□□ 0.09
SSBP1-201ENST00000265304 P2RX5Q93086 422 aa15.59■□□□□ 0.09
SSBP1-201ENST00000265304 TSPAN18Q96SJ8 248 aa15.59■□□□□ 0.09
SSBP1-201ENST00000265304 MTIF3Q9H2K0 278 aaKnown RBP15.59■□□□□ 0.09
SSBP1-201ENST00000265304 KIAA1586Q9HCI6 787 aa15.59■□□□□ 0.09
SSBP1-201ENST00000265304 UBN1Q9NPG3 1134 aa15.59■□□□□ 0.09
SSBP1-201ENST00000265304 RNF19AQ9NV58 838 aa15.59■□□□□ 0.09
SSBP1-201ENST00000265304 CXXC1Q9P0U4 656 aaPredicted RBP15.59■□□□□ 0.09
SSBP1-201ENST00000265304 PCDH10Q9P2E7 1040 aa15.59■□□□□ 0.09
SSBP1-201ENST00000265304 CPSF3Q9UKF6 684 aaKnown RBP15.59■□□□□ 0.09
SSBP1-201ENST00000265304 GIT1Q9Y2X7 761 aa15.59■□□□□ 0.09
SSBP1-201ENST00000265304 RBAK-RBAKDNI3L0D1 243 aa15.58■□□□□ 0.08
SSBP1-201ENST00000265304 MEFVO15553 781 aaPredicted RBP15.58■□□□□ 0.08
SSBP1-201ENST00000265304 AMHP03971 560 aa15.58■□□□□ 0.08
SSBP1-201ENST00000265304 STAG3L1P0CL83 205 aa15.58■□□□□ 0.08
SSBP1-201ENST00000265304 DPCR1Q3MIW9 517 aa15.58■□□□□ 0.08
SSBP1-201ENST00000265304 C9orf50Q5SZB4 431 aa15.58■□□□□ 0.08
SSBP1-201ENST00000265304 ISM2Q6H9L7 571 aa15.58■□□□□ 0.08
SSBP1-201ENST00000265304 CDR2LQ86X02 465 aaPredicted RBP15.58■□□□□ 0.08
SSBP1-201ENST00000265304 NELFCDQ8IXH7 590 aa15.58■□□□□ 0.08
SSBP1-201ENST00000265304 ZNF689Q96CS4 500 aaPredicted RBP15.58■□□□□ 0.08
SSBP1-201ENST00000265304 PGBD4Q96DM1 585 aa15.58■□□□□ 0.08
SSBP1-201ENST00000265304 BICD1Q96G01 975 aa15.58■□□□□ 0.08
SSBP1-201ENST00000265304 SLC9A7Q96T83 725 aa15.58■□□□□ 0.08
SSBP1-201ENST00000265304 CBWD1Q9BRT8 395 aa15.58■□□□□ 0.08
SSBP1-201ENST00000265304 PLEKHA5Q9HAU0 1116 aa15.58■□□□□ 0.08
SSBP1-201ENST00000265304 ANO10Q9NW15 660 aa15.58■□□□□ 0.08
SSBP1-201ENST00000265304 RWDD2AQ9UIY3 292 aa15.58■□□□□ 0.08
SSBP1-201ENST00000265304 AGO2Q9UKV8 859 aaKnown RBP15.58■□□□□ 0.08
SSBP1-201ENST00000265304 MAPK8IP1Q9UQF2 711 aa15.58■□□□□ 0.08
SSBP1-201ENST00000265304 TTC26A0AVF1 554 aa15.57■□□□□ 0.08
SSBP1-201ENST00000265304 CALUO43852 315 aaPredicted RBP15.57■□□□□ 0.08
SSBP1-201ENST00000265304 EXTL3O43909 919 aa15.57■□□□□ 0.08
SSBP1-201ENST00000265304 DGKIO75912 1065 aa15.57■□□□□ 0.08
SSBP1-201ENST00000265304 GJB5O95377 273 aa15.57■□□□□ 0.08
SSBP1-201ENST00000265304 NPTXRO95502 500 aa15.57■□□□□ 0.08
SSBP1-201ENST00000265304 PMS1P54277 932 aaKnown RBP15.57■□□□□ 0.08
SSBP1-201ENST00000265304 DEFB103AP81534 67 aa15.57■□□□□ 0.08
SSBP1-201ENST00000265304 ZSCAN23Q3MJ62 389 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms