RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 MMEP08473 750 aa14.88□□□□□ -0.03
CDH3-201ENST00000264012 BCAR1P56945 870 aa14.88□□□□□ -0.03
CDH3-201ENST00000264012 DBN1Q16643 649 aa14.88□□□□□ -0.03
CDH3-201ENST00000264012 JADE1Q6IE81 842 aa14.88□□□□□ -0.03
CDH3-201ENST00000264012 MYLK4Q86YV6 388 aaPredicted RBP14.88□□□□□ -0.03
CDH3-201ENST00000264012 ATP6V1E2Q96A05 226 aa14.88□□□□□ -0.03
CDH3-201ENST00000264012 DONSONQ9NYP3 566 aa14.88□□□□□ -0.03
CDH3-201ENST00000264012 EPHB1P54762 984 aa14.88□□□□□ -0.03
CDH3-201ENST00000264012 NPEPPSP55786 919 aa14.88□□□□□ -0.03
CDH3-201ENST00000264012 MKNK1Q9BUB5 465 aa14.88□□□□□ -0.03
CDH3-201ENST00000264012 KIF9Q9HAQ2 790 aa14.88□□□□□ -0.03
CDH3-201ENST00000264012 TRIM10Q9UDY6 481 aa14.88□□□□□ -0.03
CDH3-201ENST00000264012 HPSEQ9Y251 543 aa14.88□□□□□ -0.03
CDH3-201ENST00000264012 BCL9O00512 1426 aa14.88□□□□□ -0.03
CDH3-201ENST00000264012 ZNF185O15231 689 aa14.88□□□□□ -0.03
CDH3-201ENST00000264012 EZH2Q15910 746 aaKnown RBP14.88□□□□□ -0.03
CDH3-201ENST00000264012 XRRA1Q6P2D8 792 aa14.88□□□□□ -0.03
CDH3-201ENST00000264012 OR6J1Q8NGC5 347 aa14.88□□□□□ -0.03
CDH3-201ENST00000264012 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.88□□□□□ -0.03
CDH3-201ENST00000264012 DDX56Q9NY93 547 aaKnown RBP14.88□□□□□ -0.03
CDH3-201ENST00000264012 MID2Q9UJV3 735 aa14.88□□□□□ -0.03
CDH3-201ENST00000264012 ANGPTL3Q9Y5C1 460 aa14.88□□□□□ -0.03
CDH3-201ENST00000264012 VSNL1P62760 191 aa14.87□□□□□ -0.03
CDH3-201ENST00000264012 GPS1Q13098 491 aa14.87□□□□□ -0.03
CDH3-201ENST00000264012 GRB10Q13322 594 aa14.87□□□□□ -0.03
CDH3-201ENST00000264012 SNCBQ16143 134 aa14.87□□□□□ -0.03
CDH3-201ENST00000264012 SLC30A5Q8TAD4 765 aa14.87□□□□□ -0.03
CDH3-201ENST00000264012 TTC25Q96NG3 672 aa14.87□□□□□ -0.03
CDH3-201ENST00000264012 TAAR1Q96RJ0 339 aa14.87□□□□□ -0.03
CDH3-201ENST00000264012 PRKAG2Q9UGJ0 569 aa14.87□□□□□ -0.03
CDH3-201ENST00000264012 GOLGA8QA0A0J9YX86 632 aa14.87□□□□□ -0.03
CDH3-201ENST00000264012 GOLGA8OA6NCC3 632 aa14.87□□□□□ -0.03
CDH3-201ENST00000264012 GOLGA8NF8WBI6 632 aa14.87□□□□□ -0.03
CDH3-201ENST00000264012 CREB3O43889 395 aa14.87□□□□□ -0.03
CDH3-201ENST00000264012 CAP2P40123 477 aa14.87□□□□□ -0.03
CDH3-201ENST00000264012 STX1BP61266 288 aa14.87□□□□□ -0.03
CDH3-201ENST00000264012 MAGOHP61326 146 aaKnown RBP14.87□□□□□ -0.03
CDH3-201ENST00000264012 NCOA4Q13772 614 aa14.87□□□□□ -0.03
CDH3-201ENST00000264012 MFSD14CQ5VZR4 134 aa14.87□□□□□ -0.03
CDH3-201ENST00000264012 SRRM1Q8IYB3 904 aaKnown RBP14.87□□□□□ -0.03
CDH3-201ENST00000264012 ZNF560Q96MR9 790 aa14.87□□□□□ -0.03
CDH3-201ENST00000264012 HACL1Q9UJ83 578 aa14.87□□□□□ -0.03
CDH3-201ENST00000264012 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.87□□□□□ -0.03
CDH3-201ENST00000264012 MROH1Q8NDA8 1641 aa14.87□□□□□ -0.03
CDH3-201ENST00000264012 TARSL2A2RTX5 802 aaKnown RBP14.87□□□□□ -0.03
CDH3-201ENST00000264012 TNPO2O14787 897 aaKnown RBP14.87□□□□□ -0.03
CDH3-201ENST00000264012 SERPINB6P35237 376 aa14.87□□□□□ -0.03
CDH3-201ENST00000264012 KLK7P49862 253 aa14.87□□□□□ -0.03
CDH3-201ENST00000264012 TAP1Q03518 808 aa14.87□□□□□ -0.03
CDH3-201ENST00000264012 SNAPC2Q13487 334 aa14.87□□□□□ -0.03
CDH3-201ENST00000264012 TSTA3Q13630 321 aaPredicted RBP14.87□□□□□ -0.03
CDH3-201ENST00000264012 SPARCL1Q14515 664 aa14.87□□□□□ -0.03
CDH3-201ENST00000264012 SYT2Q8N9I0 419 aaPredicted RBP14.87□□□□□ -0.03
CDH3-201ENST00000264012 SLC35G2Q8TBE7 412 aa14.87□□□□□ -0.03
CDH3-201ENST00000264012 TTC1Q99614 292 aa14.87□□□□□ -0.03
CDH3-201ENST00000264012 KRT14P02533 472 aa14.87□□□□□ -0.03
CDH3-201ENST00000264012 TRIM68Q6AZZ1 485 aa14.87□□□□□ -0.03
CDH3-201ENST00000264012 LRRC1Q9BTT6 524 aa14.87□□□□□ -0.03
CDH3-201ENST00000264012 COL5A2P05997 1499 aaPredicted RBP14.86□□□□□ -0.03
CDH3-201ENST00000264012 A0A1W2PQJ5 194 aa14.86□□□□□ -0.03
CDH3-201ENST00000264012 POLRMTO00411 1230 aaKnown RBP14.86□□□□□ -0.03
CDH3-201ENST00000264012 KRT38O76015 456 aa14.86□□□□□ -0.03
CDH3-201ENST00000264012 DHX34Q14147 1143 aaKnown RBP14.86□□□□□ -0.03
CDH3-201ENST00000264012 COG1Q8WTW3 980 aa14.86□□□□□ -0.03
CDH3-201ENST00000264012 ERGIC2Q96RQ1 377 aa14.86□□□□□ -0.03
CDH3-201ENST00000264012 UVRAGQ9P2Y5 699 aa14.86□□□□□ -0.03
CDH3-201ENST00000264012 AGAP1Q9UPQ3 857 aa14.86□□□□□ -0.03
CDH3-201ENST00000264012 COPEO14579 308 aa14.86□□□□□ -0.03
CDH3-201ENST00000264012 ICAM1P05362 532 aa14.86□□□□□ -0.03
CDH3-201ENST00000264012 CYP11B2P19099 503 aa14.86□□□□□ -0.03
CDH3-201ENST00000264012 CHST13Q8NET6 341 aa14.86□□□□□ -0.03
CDH3-201ENST00000264012 ELAC2Q9BQ52 826 aaKnown RBP14.86□□□□□ -0.03
CDH3-201ENST00000264012 ANKEF1Q9NU02 776 aa14.86□□□□□ -0.03
CDH3-201ENST00000264012 PIN4Q9Y237 131 aaKnown RBP14.86□□□□□ -0.03
CDH3-201ENST00000264012 PMLP29590 882 aa14.86□□□□□ -0.03
CDH3-201ENST00000264012 RFC5P40937 340 aa14.86□□□□□ -0.03
CDH3-201ENST00000264012 CDH6P55285 790 aa14.86□□□□□ -0.03
CDH3-201ENST00000264012 NAB2Q15742 525 aa14.86□□□□□ -0.03
CDH3-201ENST00000264012 VPS39Q96JC1 886 aa14.86□□□□□ -0.03
CDH3-201ENST00000264012 PITPNM3Q9BZ71 974 aa14.86□□□□□ -0.03
CDH3-201ENST00000264012 DHX35Q9H5Z1 703 aaKnown RBP14.86□□□□□ -0.03
CDH3-201ENST00000264012 KRT3P12035 628 aa14.85□□□□□ -0.03
CDH3-201ENST00000264012 IL1R1P14778 569 aa14.85□□□□□ -0.03
CDH3-201ENST00000264012 SLC1A1P43005 524 aa14.85□□□□□ -0.03
CDH3-201ENST00000264012 ATG16L1Q676U5 607 aa14.85□□□□□ -0.03
CDH3-201ENST00000264012 TTC17Q96AE7 1141 aa14.85□□□□□ -0.03
CDH3-201ENST00000264012 ZCCHC17Q9NP64 241 aaKnown RBP14.85□□□□□ -0.03
CDH3-201ENST00000264012 FIS1Q9Y3D6 152 aa14.85□□□□□ -0.03
CDH3-201ENST00000264012 DYNC1LI2O43237 492 aaPredicted RBP14.85□□□□□ -0.03
CDH3-201ENST00000264012 SLC25A27O95847 323 aa14.85□□□□□ -0.03
CDH3-201ENST00000264012 COG7P83436 770 aa14.85□□□□□ -0.03
CDH3-201ENST00000264012 NR1H3Q13133 447 aa14.85□□□□□ -0.03
CDH3-201ENST00000264012 HEATR6Q6AI08 1181 aaKnown RBP14.85□□□□□ -0.03
CDH3-201ENST00000264012 C18orf8Q96DM3 657 aa14.85□□□□□ -0.03
CDH3-201ENST00000264012 SNF8Q96H20 258 aa14.85□□□□□ -0.03
CDH3-201ENST00000264012 MS4A14Q96JA4 679 aa14.85□□□□□ -0.03
CDH3-201ENST00000264012 EHD4Q9H223 541 aa14.85□□□□□ -0.03
CDH3-201ENST00000264012 TXLNGQ9NUQ3 528 aa14.85□□□□□ -0.03
CDH3-201ENST00000264012 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.85□□□□□ -0.03
CDH3-201ENST00000264012 GH1P01241 217 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms