RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 POLR3FQ9H1D9 316 aaPredicted RBP17.49■□□□□ 0.39
CTCF-201ENST00000264010 C17orf75Q9HAS0 396 aa17.49■□□□□ 0.39
CTCF-201ENST00000264010 ANKFY1Q9P2R3 1169 aa17.49■□□□□ 0.39
CTCF-201ENST00000264010 SALL4Q9UJQ4 1053 aa17.49■□□□□ 0.39
CTCF-201ENST00000264010 VWA5AO00534 786 aa17.49■□□□□ 0.39
CTCF-201ENST00000264010 GJC1P36383 396 aa17.49■□□□□ 0.39
CTCF-201ENST00000264010 CBWD6Q4V339 395 aa17.49■□□□□ 0.39
CTCF-201ENST00000264010 CBWD3Q5JTY5 395 aa17.49■□□□□ 0.39
CTCF-201ENST00000264010 CBWD5Q5RIA9 395 aa17.49■□□□□ 0.39
CTCF-201ENST00000264010 PRAMEF18Q5VWM3 479 aa17.49■□□□□ 0.39
CTCF-201ENST00000264010 GPD1LQ8N335 351 aa17.49■□□□□ 0.39
CTCF-201ENST00000264010 ZKSCAN4Q969J2 545 aaPredicted RBP17.49■□□□□ 0.39
CTCF-201ENST00000264010 FBXO40Q9UH90 709 aa17.49■□□□□ 0.39
CTCF-201ENST00000264010 RAD51CO43502 376 aa17.49■□□□□ 0.39
CTCF-201ENST00000264010 RTN2O75298 545 aa17.49■□□□□ 0.39
CTCF-201ENST00000264010 XKR3Q5GH77 459 aa17.49■□□□□ 0.39
CTCF-201ENST00000264010 SLFN12LQ6IEE8 588 aa17.49■□□□□ 0.39
CTCF-201ENST00000264010 DNAAF5Q86Y56 855 aa17.49■□□□□ 0.39
CTCF-201ENST00000264010 SULF1Q8IWU6 871 aa17.49■□□□□ 0.39
CTCF-201ENST00000264010 RIN2Q8WYP3 895 aaPredicted RBP17.49■□□□□ 0.39
CTCF-201ENST00000264010 CES2O00748 559 aa17.48■□□□□ 0.39
CTCF-201ENST00000264010 CNGA1P29973 690 aa17.48■□□□□ 0.39
CTCF-201ENST00000264010 NSFP46459 744 aaKnown RBP17.48■□□□□ 0.39
CTCF-201ENST00000264010 KRT71Q3SY84 523 aa17.48■□□□□ 0.39
CTCF-201ENST00000264010 PACS2Q86VP3 889 aa17.48■□□□□ 0.39
CTCF-201ENST00000264010 TRIM11Q96F44 468 aa17.48■□□□□ 0.39
CTCF-201ENST00000264010 GSTTP1A0A1W2PQM5 241 aa17.48■□□□□ 0.39
CTCF-201ENST00000264010 CYP26A1O43174 497 aa17.48■□□□□ 0.39
CTCF-201ENST00000264010 SMIM24O75264 130 aa17.48■□□□□ 0.39
CTCF-201ENST00000264010 PPFIA4O75335 1185 aa17.48■□□□□ 0.39
CTCF-201ENST00000264010 TRPC3Q13507 836 aa17.48■□□□□ 0.39
CTCF-201ENST00000264010 FBF1Q8TES7 1133 aa17.48■□□□□ 0.39
CTCF-201ENST00000264010 SELENOSQ9BQE4 189 aa17.48■□□□□ 0.39
CTCF-201ENST00000264010 IKZF4Q9H2S9 585 aa17.48■□□□□ 0.39
CTCF-201ENST00000264010 SYNGAP1Q96PV0 1343 aa17.48■□□□□ 0.39
CTCF-201ENST00000264010 CNTNAP1P78357 1384 aa17.48■□□□□ 0.39
CTCF-201ENST00000264010 RANBP1P43487 201 aa17.48■□□□□ 0.39
CTCF-201ENST00000264010 DR1Q01658 176 aa17.48■□□□□ 0.39
CTCF-201ENST00000264010 ENOSF1Q7L5Y1 443 aa17.48■□□□□ 0.39
CTCF-201ENST00000264010 HOOK3Q86VS8 718 aa17.48■□□□□ 0.39
CTCF-201ENST00000264010 ZBTB8OSQ8IWT0 167 aa17.48■□□□□ 0.39
CTCF-201ENST00000264010 DCPSQ96C86 337 aaKnown RBP17.48■□□□□ 0.39
CTCF-201ENST00000264010 ZNF302Q9NR11 478 aa17.48■□□□□ 0.39
CTCF-201ENST00000264010 GBP1P32455 592 aa17.47■□□□□ 0.39
CTCF-201ENST00000264010 NPTX2P47972 431 aa17.47■□□□□ 0.39
CTCF-201ENST00000264010 CCDC25Q86WR0 208 aa17.47■□□□□ 0.39
CTCF-201ENST00000264010 ACTRT1Q8TDG2 376 aa17.47■□□□□ 0.39
CTCF-201ENST00000264010 RUNDC3BQ96NL0 473 aa17.47■□□□□ 0.39
CTCF-201ENST00000264010 TMEM8AQ9HCN3 771 aa17.47■□□□□ 0.39
CTCF-201ENST00000264010 MAPK4P31152 587 aa17.47■□□□□ 0.39
CTCF-201ENST00000264010 ITGB3BPQ13352 177 aaPredicted RBP17.47■□□□□ 0.39
CTCF-201ENST00000264010 MORC4Q8TE76 937 aa17.47■□□□□ 0.39
CTCF-201ENST00000264010 RNPC3Q96LT9 517 aaKnown RBP17.47■□□□□ 0.39
CTCF-201ENST00000264010 STMN4Q9H169 189 aaPredicted RBP17.47■□□□□ 0.39
CTCF-201ENST00000264010 HOXD13P35453 343 aa17.47■□□□□ 0.39
CTCF-201ENST00000264010 PRKCEQ02156 737 aa17.47■□□□□ 0.39
CTCF-201ENST00000264010 FAM43BQ6ZT52 329 aaPredicted RBP17.47■□□□□ 0.39
CTCF-201ENST00000264010 RBM46Q8TBY0 533 aaKnown RBP17.47■□□□□ 0.39
CTCF-201ENST00000264010 AENQ8WTP8 325 aaKnown RBP17.47■□□□□ 0.39
CTCF-201ENST00000264010 KIFC3Q9BVG8 833 aa17.47■□□□□ 0.39
CTCF-201ENST00000264010 BCAS3Q9H6U6 928 aa17.47■□□□□ 0.39
CTCF-201ENST00000264010 AMACRQ9UHK6 382 aa17.47■□□□□ 0.39
CTCF-201ENST00000264010 MYH4Q9Y623 1939 aa17.46■□□□□ 0.39
CTCF-201ENST00000264010 MYO1FO00160 1098 aa17.46■□□□□ 0.39
CTCF-201ENST00000264010 LYPLA2O95372 231 aa17.46■□□□□ 0.39
CTCF-201ENST00000264010 LDHAP00338 332 aaKnown RBP17.46■□□□□ 0.39
CTCF-201ENST00000264010 ZNF211Q13398 564 aaPredicted RBP17.46■□□□□ 0.39
CTCF-201ENST00000264010 CBWD2Q8IUF1 395 aa17.46■□□□□ 0.39
CTCF-201ENST00000264010 COL20A1Q9P218 1284 aa17.46■□□□□ 0.39
CTCF-201ENST00000264010 PCDHB4Q9Y5E5 795 aa17.46■□□□□ 0.39
CTCF-201ENST00000264010 STAM2O75886 525 aa17.46■□□□□ 0.39
CTCF-201ENST00000264010 AARSP49588 968 aaKnown RBP eCLIP17.46■□□□□ 0.39
CTCF-201ENST00000264010 BRDTQ58F21 947 aaPredicted RBP17.46■□□□□ 0.39
CTCF-201ENST00000264010 CLEC4DQ8WXI8 215 aa17.46■□□□□ 0.39
CTCF-201ENST00000264010 THAP2Q9H0W7 228 aa17.46■□□□□ 0.39
CTCF-201ENST00000264010 RAB20Q9NX57 234 aa17.46■□□□□ 0.39
CTCF-201ENST00000264010 TMEM150BA6NC51 233 aa17.46■□□□□ 0.39
CTCF-201ENST00000264010 KIF1CO43896 1103 aaKnown RBP17.46■□□□□ 0.39
CTCF-201ENST00000264010 DHX9Q08211 1270 aaKnown RBP17.46■□□□□ 0.39
CTCF-201ENST00000264010 CROCCP2Q86T23 111 aa17.46■□□□□ 0.39
CTCF-201ENST00000264010 MSTO1Q9BUK6 570 aa17.46■□□□□ 0.39
CTCF-201ENST00000264010 YY1AP1Q9H869 796 aa17.46■□□□□ 0.39
CTCF-201ENST00000264010 ASIC3Q9UHC3 531 aa17.46■□□□□ 0.39
CTCF-201ENST00000264010 SRCAPQ6ZRS2 3230 aa17.46■□□□□ 0.39
CTCF-201ENST00000264010 SBF2Q86WG5 1849 aa17.45■□□□□ 0.38
CTCF-201ENST00000264010 SNCBQ16143 134 aa17.45■□□□□ 0.38
CTCF-201ENST00000264010 ZNF564Q8TBZ8 553 aaPredicted RBP17.45■□□□□ 0.38
CTCF-201ENST00000264010 CNOT8Q9UFF9 292 aaKnown RBP17.45■□□□□ 0.38
CTCF-201ENST00000264010 PLAAQ9Y263 795 aa17.45■□□□□ 0.38
CTCF-201ENST00000264010 IGSF9BQ9UPX0 1349 aa17.45■□□□□ 0.38
CTCF-201ENST00000264010 GLI1P08151 1106 aa17.45■□□□□ 0.38
CTCF-201ENST00000264010 DENND2CQ68D51 928 aa17.45■□□□□ 0.38
CTCF-201ENST00000264010 DMAC2Q9NW81 257 aa17.45■□□□□ 0.38
CTCF-201ENST00000264010 DSG3P32926 999 aa17.45■□□□□ 0.38
CTCF-201ENST00000264010 ACTR2P61160 394 aa17.45■□□□□ 0.38
CTCF-201ENST00000264010 GTF2BQ00403 316 aa17.45■□□□□ 0.38
CTCF-201ENST00000264010 FOXR1Q6PIV2 292 aa17.45■□□□□ 0.38
CTCF-201ENST00000264010 CAVIN3Q969G5 261 aa17.45■□□□□ 0.38
CTCF-201ENST00000264010 FMO2Q99518 471 aa17.45■□□□□ 0.38
CTCF-201ENST00000264010 NUP85Q9BW27 656 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms