RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 MRPL10Q7Z7H8 261 aaKnown RBP18.18■□□□□ 0.5
CHCHD3-201ENST00000262570 ZBTB33Q86T24 672 aa18.18■□□□□ 0.5
CHCHD3-201ENST00000262570 RNPC3Q96LT9 517 aaKnown RBP18.18■□□□□ 0.5
CHCHD3-201ENST00000262570 TMEM161AQ9NX61 479 aa18.18■□□□□ 0.5
CHCHD3-201ENST00000262570 SLC4A7Q9Y6M7 1214 aa18.18■□□□□ 0.5
CHCHD3-201ENST00000262570 TTC3P53804 2025 aa18.18■□□□□ 0.5
CHCHD3-201ENST00000262570 LAMA3Q16787 3333 aa18.18■□□□□ 0.5
CHCHD3-201ENST00000262570 PPP1R3GB7ZBB8 358 aa18.17■□□□□ 0.5
CHCHD3-201ENST00000262570 PDXKO00764 312 aa18.17■□□□□ 0.5
CHCHD3-201ENST00000262570 CD44P16070 742 aaKnown RBP18.17■□□□□ 0.5
CHCHD3-201ENST00000262570 HS2ST1Q7LGA3 356 aa18.17■□□□□ 0.5
CHCHD3-201ENST00000262570 PHOSPHO2Q8TCD6 241 aa18.17■□□□□ 0.5
CHCHD3-201ENST00000262570 NXF3Q9H4D5 531 aaKnown RBP18.17■□□□□ 0.5
CHCHD3-201ENST00000262570 AGPAT3Q9NRZ7 376 aa18.17■□□□□ 0.5
CHCHD3-201ENST00000262570 TYW1Q9NV66 732 aaKnown RBP18.17■□□□□ 0.5
CHCHD3-201ENST00000262570 RNF216Q9NWF9 866 aaPredicted RBP18.17■□□□□ 0.5
CHCHD3-201ENST00000262570 CGNQ9P2M7 1197 aaKnown RBP18.17■□□□□ 0.5
CHCHD3-201ENST00000262570 HES2Q9Y543 173 aa18.17■□□□□ 0.5
CHCHD3-201ENST00000262570 STAG3L1P0CL83 205 aa18.17■□□□□ 0.5
CHCHD3-201ENST00000262570 GARTP22102 1010 aa18.17■□□□□ 0.5
CHCHD3-201ENST00000262570 PPP1R2P41236 205 aa18.17■□□□□ 0.5
CHCHD3-201ENST00000262570 MATR3P43243 847 aaKnown RBP eCLIP18.17■□□□□ 0.51e-6■■■■□ 20.4
CHCHD3-201ENST00000262570 NPAS4Q8IUM7 802 aa18.17■□□□□ 0.5
CHCHD3-201ENST00000262570 TDHQ8IZJ6 230 aa18.17■□□□□ 0.5
CHCHD3-201ENST00000262570 CEP120Q8N960 986 aa18.17■□□□□ 0.5
CHCHD3-201ENST00000262570 POMGNT1Q8WZA1 660 aa18.17■□□□□ 0.5
CHCHD3-201ENST00000262570 SLC9A7Q96T83 725 aa18.17■□□□□ 0.5
CHCHD3-201ENST00000262570 CBWD1Q9BRT8 395 aa18.17■□□□□ 0.5
CHCHD3-201ENST00000262570 RNF39Q9H2S5 420 aa18.17■□□□□ 0.5
CHCHD3-201ENST00000262570 TRAF3IP3Q9Y228 551 aa18.17■□□□□ 0.5
CHCHD3-201ENST00000262570 PCDHB7Q9Y5E2 793 aa18.17■□□□□ 0.5
CHCHD3-201ENST00000262570 MEIS3P2A8K0S8 358 aa18.16■□□□□ 0.5
CHCHD3-201ENST00000262570 FAM189A1O60320 539 aa18.16■□□□□ 0.5
CHCHD3-201ENST00000262570 HARSP12081 509 aaKnown RBP18.16■□□□□ 0.5
CHCHD3-201ENST00000262570 IBSPP21815 317 aaPredicted RBP18.16■□□□□ 0.5
CHCHD3-201ENST00000262570 NLRP12P59046 1061 aa18.16■□□□□ 0.5
CHCHD3-201ENST00000262570 STIM1Q13586 685 aa18.16■□□□□ 0.5
CHCHD3-201ENST00000262570 ZCWPW2Q504Y3 356 aa18.16■□□□□ 0.5
CHCHD3-201ENST00000262570 CENPPQ6IPU0 288 aa18.16■□□□□ 0.5
CHCHD3-201ENST00000262570 ARMCX5Q6P1M9 558 aa18.16■□□□□ 0.5
CHCHD3-201ENST00000262570 AGMOQ6ZNB7 445 aa18.16■□□□□ 0.5
CHCHD3-201ENST00000262570 TMCO2Q7Z6W1 182 aaPredicted RBP18.16■□□□□ 0.5
CHCHD3-201ENST00000262570 THNSL1Q8IYQ7 743 aa18.16■□□□□ 0.5
CHCHD3-201ENST00000262570 MLKLQ8NB16 471 aa18.16■□□□□ 0.5
CHCHD3-201ENST00000262570 GOLGA5Q8TBA6 731 aa18.16■□□□□ 0.5
CHCHD3-201ENST00000262570 TMEM174Q8WUU8 243 aa18.16■□□□□ 0.5
CHCHD3-201ENST00000262570 PGBD4Q96DM1 585 aa18.16■□□□□ 0.5
CHCHD3-201ENST00000262570 DHTKD1Q96HY7 919 aaPredicted RBP18.16■□□□□ 0.5
CHCHD3-201ENST00000262570 MSTO1Q9BUK6 570 aa18.16■□□□□ 0.5
CHCHD3-201ENST00000262570 SEMA6BQ9H3T3 888 aa18.16■□□□□ 0.5
CHCHD3-201ENST00000262570 LRFN2Q9ULH4 789 aa18.16■□□□□ 0.5
CHCHD3-201ENST00000262570 CLIC2O15247 247 aa18.15■□□□□ 0.5
CHCHD3-201ENST00000262570 OGTO15294 1046 aa18.15■□□□□ 0.5
CHCHD3-201ENST00000262570 UPP2O95045 317 aa18.15■□□□□ 0.5
CHCHD3-201ENST00000262570 ATP2A2P16615 1042 aaKnown RBP18.15■□□□□ 0.5
CHCHD3-201ENST00000262570 GRM5P41594 1212 aa18.15■□□□□ 0.5
CHCHD3-201ENST00000262570 PRPF38BQ5VTL8 546 aaKnown RBP18.15■□□□□ 0.5
CHCHD3-201ENST00000262570 C12orf56Q8IXR9 622 aa18.15■□□□□ 0.5
CHCHD3-201ENST00000262570 HACE1Q8IYU2 909 aa18.15■□□□□ 0.5
CHCHD3-201ENST00000262570 RNF169Q8NCN4 708 aa18.15■□□□□ 0.5
CHCHD3-201ENST00000262570 LPPQ93052 612 aa18.15■□□□□ 0.5
CHCHD3-201ENST00000262570 SNTG2Q9NY99 539 aa18.15■□□□□ 0.5
CHCHD3-201ENST00000262570 AGO2Q9UKV8 859 aaKnown RBP18.15■□□□□ 0.5
CHCHD3-201ENST00000262570 PSMA7O14818 248 aa18.14■□□□□ 0.49
CHCHD3-201ENST00000262570 KIAA0391O15091 583 aaKnown RBP18.14■□□□□ 0.49
CHCHD3-201ENST00000262570 LETM1O95202 739 aaPredicted RBP18.14■□□□□ 0.49
CHCHD3-201ENST00000262570 GJB5O95377 273 aa18.14■□□□□ 0.49
CHCHD3-201ENST00000262570 ITGA4P13612 1032 aa18.14■□□□□ 0.49
CHCHD3-201ENST00000262570 DPCR1Q3MIW9 517 aa18.14■□□□□ 0.49
CHCHD3-201ENST00000262570 SEZ6Q53EL9 994 aa18.14■□□□□ 0.49
CHCHD3-201ENST00000262570 SASS6Q6UVJ0 657 aa18.14■□□□□ 0.49
CHCHD3-201ENST00000262570 HERC6Q8IVU3 1022 aa18.14■□□□□ 0.49
CHCHD3-201ENST00000262570 TMEM192Q8IY95 271 aa18.14■□□□□ 0.49
CHCHD3-201ENST00000262570 PCIF1Q9H4Z3 704 aa18.14■□□□□ 0.49
CHCHD3-201ENST00000262570 RNF19AQ9NV58 838 aa18.14■□□□□ 0.49
CHCHD3-201ENST00000262570 CALUO43852 315 aaPredicted RBP18.13■□□□□ 0.49
CHCHD3-201ENST00000262570 DGKIO75912 1065 aa18.13■□□□□ 0.49
CHCHD3-201ENST00000262570 LDHAP00338 332 aaKnown RBP18.13■□□□□ 0.49
CHCHD3-201ENST00000262570 AKAP5P24588 427 aa18.13■□□□□ 0.49
CHCHD3-201ENST00000262570 CCNE1P24864 410 aa18.13■□□□□ 0.49
CHCHD3-201ENST00000262570 PMS1P54277 932 aaKnown RBP18.13■□□□□ 0.49
CHCHD3-201ENST00000262570 OSTNP61366 133 aa18.13■□□□□ 0.49
CHCHD3-201ENST00000262570 NFIL3Q16649 462 aa18.13■□□□□ 0.49
CHCHD3-201ENST00000262570 KYAT1Q16773 422 aa18.13■□□□□ 0.49
CHCHD3-201ENST00000262570 KLHL10Q6JEL2 608 aa18.13■□□□□ 0.49
CHCHD3-201ENST00000262570 SLC9A9Q8IVB4 645 aa18.13■□□□□ 0.49
CHCHD3-201ENST00000262570 ZSWIM2Q8NEG5 633 aa18.13■□□□□ 0.49
CHCHD3-201ENST00000262570 P2RX5Q93086 422 aa18.13■□□□□ 0.49
CHCHD3-201ENST00000262570 CCDC94Q9BW85 323 aaPredicted RBP18.13■□□□□ 0.49
CHCHD3-201ENST00000262570 APOL6Q9BWW8 343 aa18.13■□□□□ 0.49
CHCHD3-201ENST00000262570 UBN1Q9NPG3 1134 aa18.13■□□□□ 0.49
CHCHD3-201ENST00000262570 HSPBP1Q9NZL4 362 aa18.13■□□□□ 0.49
CHCHD3-201ENST00000262570 CPSF3Q9UKF6 684 aaKnown RBP18.13■□□□□ 0.49
CHCHD3-201ENST00000262570 GIT1Q9Y2X7 761 aa18.13■□□□□ 0.49
CHCHD3-201ENST00000262570 HOXA2O43364 376 aa18.13■□□□□ 0.49
CHCHD3-201ENST00000262570 RECQL4O94761 1208 aa18.13■□□□□ 0.49
CHCHD3-201ENST00000262570 CLTAP09496 248 aa18.13■□□□□ 0.49
CHCHD3-201ENST00000262570 FGFR1P11362 822 aa18.13■□□□□ 0.49
CHCHD3-201ENST00000262570 TNFSF9P41273 254 aa18.13■□□□□ 0.49
CHCHD3-201ENST00000262570 MYBPC2Q14324 1141 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms