RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 GAP43P17677 238 aa18.39■□□□□ 0.53
SDCBP-201ENST00000260130 EEF1DP3Q658K8 133 aa18.39■□□□□ 0.53
SDCBP-201ENST00000260130 HACE1Q8IYU2 909 aa18.39■□□□□ 0.53
SDCBP-201ENST00000260130 SLC17A8Q8NDX2 589 aa18.39■□□□□ 0.53
SDCBP-201ENST00000260130 TARS2Q9BW92 718 aaKnown RBP18.39■□□□□ 0.53
SDCBP-201ENST00000260130 TRIM9Q9C026 710 aa18.39■□□□□ 0.53
SDCBP-201ENST00000260130 UBN1Q9NPG3 1134 aa18.39■□□□□ 0.53
SDCBP-201ENST00000260130 SERTAD1Q9UHV2 236 aa18.39■□□□□ 0.53
SDCBP-201ENST00000260130 R3HCC1Q9Y3T6 440 aaKnown RBP18.39■□□□□ 0.53
SDCBP-201ENST00000260130 EPOPA6NHQ4 379 aa18.38■□□□□ 0.53
SDCBP-201ENST00000260130 BMPR1AP36894 532 aa18.38■□□□□ 0.53
SDCBP-201ENST00000260130 SYKP43405 635 aa18.38■□□□□ 0.53
SDCBP-201ENST00000260130 NDUFA8P51970 172 aa18.38■□□□□ 0.53
SDCBP-201ENST00000260130 SFR1Q86XK3 245 aa18.38■□□□□ 0.53
SDCBP-201ENST00000260130 FSIP1Q8NA03 581 aa18.38■□□□□ 0.53
SDCBP-201ENST00000260130 MYLIPQ8WY64 445 aa18.38■□□□□ 0.53
SDCBP-201ENST00000260130 MRPS27Q92552 414 aaKnown RBP18.38■□□□□ 0.53
SDCBP-201ENST00000260130 C7orf25Q9BPX7 421 aa18.38■□□□□ 0.53
SDCBP-201ENST00000260130 RNF39Q9H2S5 420 aa18.38■□□□□ 0.53
SDCBP-201ENST00000260130 NXF3Q9H4D5 531 aaKnown RBP18.38■□□□□ 0.53
SDCBP-201ENST00000260130 RSAD1Q9HA92 442 aa18.38■□□□□ 0.53
SDCBP-201ENST00000260130 PANK4Q9NVE7 773 aa18.38■□□□□ 0.53
SDCBP-201ENST00000260130 USP25Q9UHP3 1055 aa18.38■□□□□ 0.53
SDCBP-201ENST00000260130 FRMD3A2A2Y4 597 aa18.38■□□□□ 0.53
SDCBP-201ENST00000260130 GOLGA6L4A6NEF3 574 aa18.38■□□□□ 0.53
SDCBP-201ENST00000260130 RFXAPO00287 272 aa18.38■□□□□ 0.53
SDCBP-201ENST00000260130 NMT1P30419 496 aaKnown RBP18.38■□□□□ 0.53
SDCBP-201ENST00000260130 ABCD1P33897 745 aa18.38■□□□□ 0.53
SDCBP-201ENST00000260130 HERC4Q5GLZ8 1057 aaPredicted RBP18.38■□□□□ 0.53
SDCBP-201ENST00000260130 CNNM4Q6P4Q7 775 aa18.38■□□□□ 0.53
SDCBP-201ENST00000260130 LRRC55Q6ZSA7 311 aa18.38■□□□□ 0.53
SDCBP-201ENST00000260130 ZNF720Q7Z2F6 126 aa18.38■□□□□ 0.53
SDCBP-201ENST00000260130 CCDC65Q8IXS2 484 aa18.38■□□□□ 0.53
SDCBP-201ENST00000260130 FBXO22Q8NEZ5 403 aa18.38■□□□□ 0.53
SDCBP-201ENST00000260130 TBX20Q9UMR3 447 aa18.38■□□□□ 0.53
SDCBP-201ENST00000260130 ACTN4O43707 911 aaKnown RBP18.37■□□□□ 0.53
SDCBP-201ENST00000260130 CTNNB1P35222 781 aa18.37■□□□□ 0.53
SDCBP-201ENST00000260130 GTF2BQ00403 316 aa18.37■□□□□ 0.53
SDCBP-201ENST00000260130 SPOUT1Q5T280 376 aaKnown RBP18.37■□□□□ 0.53
SDCBP-201ENST00000260130 APBB1IPQ7Z5R6 666 aaPredicted RBP18.37■□□□□ 0.53
SDCBP-201ENST00000260130 LRRC43Q8N309 656 aa18.37■□□□□ 0.53
SDCBP-201ENST00000260130 GAS2L1Q99501 681 aaPredicted RBP18.37■□□□□ 0.53
SDCBP-201ENST00000260130 APOL6Q9BWW8 343 aa18.37■□□□□ 0.53
SDCBP-201ENST00000260130 MRPL9Q9BYD2 267 aaKnown RBP18.37■□□□□ 0.53
SDCBP-201ENST00000260130 ST6GALNAC4Q9H4F1 302 aa18.37■□□□□ 0.53
SDCBP-201ENST00000260130 PTPRHQ9HD43 1115 aa18.37■□□□□ 0.53
SDCBP-201ENST00000260130 RB1P06400 928 aa18.37■□□□□ 0.53
SDCBP-201ENST00000260130 AFMP43652 599 aa18.37■□□□□ 0.53
SDCBP-201ENST00000260130 DCAF4L1Q3SXM0 396 aa18.37■□□□□ 0.53
SDCBP-201ENST00000260130 NOMO2Q5JPE7 1267 aa18.37■□□□□ 0.53
SDCBP-201ENST00000260130 ZPBP2Q6X784 338 aa18.37■□□□□ 0.53
SDCBP-201ENST00000260130 GOLPH3LQ9H4A5 285 aa18.37■□□□□ 0.53
SDCBP-201ENST00000260130 CWH43Q9H720 699 aa18.37■□□□□ 0.53
SDCBP-201ENST00000260130 MRPL44Q9H9J2 332 aaKnown RBP18.37■□□□□ 0.53
SDCBP-201ENST00000260130 OLFML3Q9NRN5 406 aa18.37■□□□□ 0.53
SDCBP-201ENST00000260130 INPP5FQ9Y2H2 1132 aa18.37■□□□□ 0.53
SDCBP-201ENST00000260130 C5orf67F2Z3F1 127 aa18.36■□□□□ 0.53
SDCBP-201ENST00000260130 TCHPQ9BT92 498 aa18.36■□□□□ 0.53
SDCBP-201ENST00000260130 AAASQ9NRG9 546 aa18.36■□□□□ 0.53
SDCBP-201ENST00000260130 TBC1D7Q9P0N9 293 aa18.36■□□□□ 0.53
SDCBP-201ENST00000260130 HCSTQ9UBK5 93 aa18.36■□□□□ 0.53
SDCBP-201ENST00000260130 GIT1Q9Y2X7 761 aa18.36■□□□□ 0.53
SDCBP-201ENST00000260130 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.35■□□□□ 0.53
SDCBP-201ENST00000260130 TOM1L1O75674 476 aa18.35■□□□□ 0.53
SDCBP-201ENST00000260130 AKAP5P24588 427 aa18.35■□□□□ 0.53
SDCBP-201ENST00000260130 ASIC1P78348 528 aa18.35■□□□□ 0.53
SDCBP-201ENST00000260130 ZC2HC1CQ53FD0 456 aaPredicted RBP18.35■□□□□ 0.53
SDCBP-201ENST00000260130 URGCPQ8TCY9 931 aa18.35■□□□□ 0.53
SDCBP-201ENST00000260130 BICD1Q96G01 975 aa18.35■□□□□ 0.53
SDCBP-201ENST00000260130 PAGE5Q96GU1 130 aa18.35■□□□□ 0.53
SDCBP-201ENST00000260130 PLVAPQ9BX97 442 aa18.35■□□□□ 0.53
SDCBP-201ENST00000260130 BLZF1Q9H2G9 400 aa18.35■□□□□ 0.53
SDCBP-201ENST00000260130 KANSL3Q9P2N6 904 aa18.35■□□□□ 0.53
SDCBP-201ENST00000260130 PARP2Q9UGN5 583 aa18.35■□□□□ 0.53
SDCBP-201ENST00000260130 MYH11P35749 1972 aa18.35■□□□□ 0.53
SDCBP-201ENST00000260130 ARL5CA6NH57 179 aa18.35■□□□□ 0.53
SDCBP-201ENST00000260130 H3BNC9 293 aa18.35■□□□□ 0.53
SDCBP-201ENST00000260130 FOSL2P15408 326 aa18.35■□□□□ 0.53
SDCBP-201ENST00000260130 PROZP22891 400 aa18.35■□□□□ 0.53
SDCBP-201ENST00000260130 AFF1P51825 1210 aaKnown RBP18.35■□□□□ 0.53
SDCBP-201ENST00000260130 ADGRE1Q14246 886 aa18.35■□□□□ 0.53
SDCBP-201ENST00000260130 ZNF568Q3ZCX4 644 aa18.35■□□□□ 0.53
SDCBP-201ENST00000260130 MPZL3Q6UWV2 235 aa18.35■□□□□ 0.53
SDCBP-201ENST00000260130 GRAMD1CQ8IYS0 662 aa18.35■□□□□ 0.53
SDCBP-201ENST00000260130 GAD1Q99259 594 aa18.35■□□□□ 0.53
SDCBP-201ENST00000260130 CDT1Q9H211 546 aa18.35■□□□□ 0.53
SDCBP-201ENST00000260130 PDCL3Q9H2J4 239 aa18.35■□□□□ 0.53
SDCBP-201ENST00000260130 TBC1D13Q9NVG8 400 aa18.35■□□□□ 0.53
SDCBP-201ENST00000260130 SNTG2Q9NY99 539 aa18.35■□□□□ 0.53
SDCBP-201ENST00000260130 PCDHB12Q9Y5F1 795 aa18.35■□□□□ 0.53
SDCBP-201ENST00000260130 TRANK1O15050 2925 aa18.35■□□□□ 0.53
SDCBP-201ENST00000260130 LPXNO60711 386 aa18.34■□□□□ 0.53
SDCBP-201ENST00000260130 LAG3P18627 525 aa18.34■□□□□ 0.53
SDCBP-201ENST00000260130 CASP1P29466 404 aa18.34■□□□□ 0.53
SDCBP-201ENST00000260130 COASYQ13057 564 aa18.34■□□□□ 0.53
SDCBP-201ENST00000260130 GPM6BQ13491 265 aa18.34■□□□□ 0.53
SDCBP-201ENST00000260130 CUL4BQ13620 913 aa18.34■□□□□ 0.53
SDCBP-201ENST00000260130 ZBTB33Q86T24 672 aa18.34■□□□□ 0.53
SDCBP-201ENST00000260130 MAP4K3Q8IVH8 894 aa18.34■□□□□ 0.53
SDCBP-201ENST00000260130 GDPD5Q8WTR4 605 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms