RNA–Protein interactions for RNA: ENST00000225842.3

CCL1-201, Transcript of C-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL1, Length 592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1-201ENST00000225842 USP33Q8TEY7 942 aa8.33□□□□□ -1.08
CCL1-201ENST00000225842 ISCA1Q9BUE6 129 aa8.33□□□□□ -1.08
CCL1-201ENST00000225842 C1QTNF1Q9BXJ1 281 aa8.33□□□□□ -1.08
CCL1-201ENST00000225842 PAK6Q9NQU5 681 aaPredicted RBP8.33□□□□□ -1.08
CCL1-201ENST00000225842 TOMM22Q9NS69 142 aa8.33□□□□□ -1.08
CCL1-201ENST00000225842 PNMA8BQ9ULN7 279 aaPredicted RBP8.33□□□□□ -1.08
CCL1-201ENST00000225842 PCDHGA9Q9Y5G4 932 aaKnown RBP8.33□□□□□ -1.08
CCL1-201ENST00000225842 PCDHGA8Q9Y5G5 932 aa8.33□□□□□ -1.08
CCL1-201ENST00000225842 PCDHGA7Q9Y5G6 932 aa8.33□□□□□ -1.08
CCL1-201ENST00000225842 PCDHGA6Q9Y5G7 932 aa8.33□□□□□ -1.08
CCL1-201ENST00000225842 PCDHGA3Q9Y5H0 932 aa8.33□□□□□ -1.08
CCL1-201ENST00000225842 PCDHGA2Q9Y5H1 932 aa8.33□□□□□ -1.08
CCL1-201ENST00000225842 SCN9AQ15858 1988 aa8.33□□□□□ -1.08
CCL1-201ENST00000225842 NUP98P52948 1817 aa8.33□□□□□ -1.08
CCL1-201ENST00000225842 ADGRA2Q96PE1 1338 aa8.32□□□□□ -1.08
CCL1-201ENST00000225842 LCHNA4D1U4 455 aa8.32□□□□□ -1.08
CCL1-201ENST00000225842 GOLGA8AA7E2F4 631 aa8.32□□□□□ -1.08
CCL1-201ENST00000225842 GOLGA8BA8MQT2 603 aa8.32□□□□□ -1.08
CCL1-201ENST00000225842 DVL2O14641 736 aa8.32□□□□□ -1.08
CCL1-201ENST00000225842 NPHS1O60500 1241 aa8.32□□□□□ -1.08
CCL1-201ENST00000225842 IL33O95760 270 aa8.32□□□□□ -1.08
CCL1-201ENST00000225842 AMY2AP04746 511 aa8.32□□□□□ -1.08
CCL1-201ENST00000225842 GNAT1P11488 350 aa8.32□□□□□ -1.08
CCL1-201ENST00000225842 AMY2BP19961 511 aa8.32□□□□□ -1.08
CCL1-201ENST00000225842 FPR2P25090 351 aa8.32□□□□□ -1.08
CCL1-201ENST00000225842 RPL10P27635 214 aaKnown RBP8.32□□□□□ -1.08
CCL1-201ENST00000225842 SNAPC2Q13487 334 aa8.32□□□□□ -1.08
CCL1-201ENST00000225842 GAB4Q2WGN9 574 aa8.32□□□□□ -1.08
CCL1-201ENST00000225842 TMEM240Q5SV17 173 aa8.32□□□□□ -1.08
CCL1-201ENST00000225842 CYP2R1Q6VVX0 501 aa8.32□□□□□ -1.08
CCL1-201ENST00000225842 ARHGAP36Q6ZRI8 547 aa8.32□□□□□ -1.08
CCL1-201ENST00000225842 CEP68Q76N32 757 aa8.32□□□□□ -1.08
CCL1-201ENST00000225842 SPACA3Q8IXA5 215 aa8.32□□□□□ -1.08
CCL1-201ENST00000225842 SAMD3Q8N6K7 520 aa8.32□□□□□ -1.08
CCL1-201ENST00000225842 TMEM169Q96HH4 297 aa8.32□□□□□ -1.08
CCL1-201ENST00000225842 SCYL1Q96KG9 808 aa8.32□□□□□ -1.08
CCL1-201ENST00000225842 ELF4Q99607 663 aaPredicted RBP8.32□□□□□ -1.08
CCL1-201ENST00000225842 COA1Q9GZY4 146 aa8.32□□□□□ -1.08
CCL1-201ENST00000225842 ANLNQ9NQW6 1124 aa8.32□□□□□ -1.08
CCL1-201ENST00000225842 GABRQQ9UN88 632 aa8.32□□□□□ -1.08
CCL1-201ENST00000225842 NOC2LQ9Y3T9 749 aaKnown RBP8.32□□□□□ -1.08
CCL1-201ENST00000225842 SPO11Q9Y5K1 396 aa8.32□□□□□ -1.08
CCL1-201ENST00000225842 MRFAP1Q9Y605 127 aa8.32□□□□□ -1.08
CCL1-201ENST00000225842 DDX60Q8IY21 1712 aaKnown RBP8.32□□□□□ -1.08
CCL1-201ENST00000225842 ZNF646O15015 1829 aaPredicted RBP8.31□□□□□ -1.08
CCL1-201ENST00000225842 LAMA2P24043 3122 aaKnown RBP8.31□□□□□ -1.08
CCL1-201ENST00000225842 LTFP02788 710 aa8.31□□□□□ -1.08
CCL1-201ENST00000225842 ACAP2Q15057 778 aa8.31□□□□□ -1.08
CCL1-201ENST00000225842 GPR19Q15760 415 aa8.31□□□□□ -1.08
CCL1-201ENST00000225842 EPM2AIP1Q7L775 607 aaPredicted RBP8.31□□□□□ -1.08
CCL1-201ENST00000225842 ALYREFQ86V81 257 aaKnown RBP8.31□□□□□ -1.08
CCL1-201ENST00000225842 RASSF3Q86WH2 238 aa8.31□□□□□ -1.08
CCL1-201ENST00000225842 CREG2Q8IUH2 290 aa8.31□□□□□ -1.08
CCL1-201ENST00000225842 TEX2Q8IWB9 1127 aa8.31□□□□□ -1.08
CCL1-201ENST00000225842 AMOTL1Q8IY63 956 aa8.31□□□□□ -1.08
CCL1-201ENST00000225842 CMTR2Q8IYT2 770 aaKnown RBP8.31□□□□□ -1.08
CCL1-201ENST00000225842 HSPBAP1Q96EW2 488 aa8.31□□□□□ -1.08
CCL1-201ENST00000225842 PCIF1Q9H4Z3 704 aa8.31□□□□□ -1.08
CCL1-201ENST00000225842 C11orf49Q9H6J7 331 aa8.31□□□□□ -1.08
CCL1-201ENST00000225842 ERVK13-1Q9NX77 482 aa8.31□□□□□ -1.08
CCL1-201ENST00000225842 LAMB4A4D0S4 1761 aa8.3□□□□□ -1.08
CCL1-201ENST00000225842 TCRBV5S4A2TA0A5A2 114 aa8.3□□□□□ -1.08
CCL1-201ENST00000225842 LPOP22079 712 aaPredicted RBP8.3□□□□□ -1.08
CCL1-201ENST00000225842 LSP1P33241 339 aa8.3□□□□□ -1.08
CCL1-201ENST00000225842 CYP2C19P33261 490 aa8.3□□□□□ -1.08
CCL1-201ENST00000225842 FLT3LGP49771 235 aa8.3□□□□□ -1.08
CCL1-201ENST00000225842 SMAD3P84022 425 aaKnown RBP8.3□□□□□ -1.08
CCL1-201ENST00000225842 CYP27A1Q02318 531 aa8.3□□□□□ -1.08
CCL1-201ENST00000225842 SMAD2Q15796 467 aaKnown RBP8.3□□□□□ -1.08
CCL1-201ENST00000225842 ARHGAP29Q52LW3 1261 aa8.3□□□□□ -1.08
CCL1-201ENST00000225842 DUSP27Q5VZP5 1158 aa8.3□□□□□ -1.08
CCL1-201ENST00000225842 TSHZ1Q6ZSZ6 1077 aa8.3□□□□□ -1.08
CCL1-201ENST00000225842 ERO1BQ86YB8 467 aa8.3□□□□□ -1.08
CCL1-201ENST00000225842 ANKRD18AQ8IVF6 992 aa8.3□□□□□ -1.08
CCL1-201ENST00000225842 C8orf58Q8NAV2 365 aa8.3□□□□□ -1.08
CCL1-201ENST00000225842 TMEM52Q8NDY8 209 aa8.3□□□□□ -1.08
CCL1-201ENST00000225842 SVIPQ8NHG7 77 aa8.3□□□□□ -1.08
CCL1-201ENST00000225842 TRMT2BQ96GJ1 504 aaKnown RBP8.3□□□□□ -1.08
CCL1-201ENST00000225842 UHRF1Q96T88 793 aaPredicted RBP8.3□□□□□ -1.08
CCL1-201ENST00000225842 LBHD1Q9BQE6 289 aaPredicted RBP8.3□□□□□ -1.08
CCL1-201ENST00000225842 MARCH2Q9P0N8 246 aa8.3□□□□□ -1.08
CCL1-201ENST00000225842 STOML1Q9UBI4 398 aa8.3□□□□□ -1.08
CCL1-201ENST00000225842 GULP1Q9UBP9 304 aa8.3□□□□□ -1.08
CCL1-201ENST00000225842 RAXQ9Y2V3 346 aa8.3□□□□□ -1.08
CCL1-201ENST00000225842 PCDHAC2Q9Y5I4 1007 aa8.3□□□□□ -1.08
CCL1-201ENST00000225842 MED23Q9ULK4 1368 aa8.3□□□□□ -1.08
CCL1-201ENST00000225842 F8W031 263 aaPredicted RBP8.29□□□□□ -1.08
CCL1-201ENST00000225842 H7BY64 318 aa8.29□□□□□ -1.08
CCL1-201ENST00000225842 PDHXO00330 501 aa8.29□□□□□ -1.08
CCL1-201ENST00000225842 SCDO00767 359 aa8.29□□□□□ -1.08
CCL1-201ENST00000225842 NKRFO15226 690 aaKnown RBP eCLIP8.29□□□□□ -1.08
CCL1-201ENST00000225842 F13BP05160 661 aa8.29□□□□□ -1.08
CCL1-201ENST00000225842 ENDOUP21128 410 aaKnown RBP8.29□□□□□ -1.08
CCL1-201ENST00000225842 GPR3P46089 330 aa8.29□□□□□ -1.08
CCL1-201ENST00000225842 KIF11P52732 1056 aa8.29□□□□□ -1.08
CCL1-201ENST00000225842 RBM5P52756 815 aaKnown RBP eCLIP8.29□□□□□ -1.08
CCL1-201ENST00000225842 GNAI1P63096 354 aa8.29□□□□□ -1.08
CCL1-201ENST00000225842 EGR3Q06889 387 aa8.29□□□□□ -1.08
CCL1-201ENST00000225842 TNFAIP1Q13829 316 aa8.29□□□□□ -1.08
CCL1-201ENST00000225842 GRM3Q14832 879 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms