RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 FGF18O76093 207 aa13.93□□□□□ -0.18
LSM5-201ENST00000223084 DDHD2O94830 711 aa13.93□□□□□ -0.18
LSM5-201ENST00000223084 SCNN1GP51170 649 aa13.93□□□□□ -0.18
LSM5-201ENST00000223084 NUCB2P80303 420 aa13.93□□□□□ -0.18
LSM5-201ENST00000223084 STRN3Q13033 797 aa13.93□□□□□ -0.18
LSM5-201ENST00000223084 CAMK1Q14012 370 aa13.93□□□□□ -0.18
LSM5-201ENST00000223084 PTPROQ16827 1216 aa13.93□□□□□ -0.18
LSM5-201ENST00000223084 ZBTB33Q86T24 672 aa13.93□□□□□ -0.18
LSM5-201ENST00000223084 SFR1Q86XK3 245 aa13.93□□□□□ -0.18
LSM5-201ENST00000223084 URGCPQ8TCY9 931 aa13.93□□□□□ -0.18
LSM5-201ENST00000223084 ZBTB45Q96K62 511 aaPredicted RBP13.93□□□□□ -0.18
LSM5-201ENST00000223084 ZNF558Q96NG5 402 aa13.93□□□□□ -0.18
LSM5-201ENST00000223084 FIZ1Q96SL8 496 aa13.93□□□□□ -0.18
LSM5-201ENST00000223084 ADPGKQ9BRR6 497 aa13.93□□□□□ -0.18
LSM5-201ENST00000223084 CXCL16Q9H2A7 254 aa13.93□□□□□ -0.18
LSM5-201ENST00000223084 SNTG2Q9NY99 539 aa13.93□□□□□ -0.18
LSM5-201ENST00000223084 FAM13BQ9NYF5 915 aa13.93□□□□□ -0.18
LSM5-201ENST00000223084 TBC1D7Q9P0N9 293 aa13.93□□□□□ -0.18
LSM5-201ENST00000223084 DNAJB4Q9UDY4 337 aa13.93□□□□□ -0.18
LSM5-201ENST00000223084 KCNG1Q9UIX4 513 aa13.93□□□□□ -0.18
LSM5-201ENST00000223084 TNFSF13BQ9Y275 285 aa13.93□□□□□ -0.18
LSM5-201ENST00000223084 GDAQ9Y2T3 454 aa13.93□□□□□ -0.18
LSM5-201ENST00000223084 GIT1Q9Y2X7 761 aa13.93□□□□□ -0.18
LSM5-201ENST00000223084 ATP6V1DQ9Y5K8 247 aa13.93□□□□□ -0.18
LSM5-201ENST00000223084 BRWD1Q9NSI6 2320 aa13.93□□□□□ -0.18
LSM5-201ENST00000223084 TRIP11Q15643 1979 aa13.92□□□□□ -0.18
LSM5-201ENST00000223084 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.92□□□□□ -0.18
LSM5-201ENST00000223084 HARSP12081 509 aaKnown RBP13.92□□□□□ -0.18
LSM5-201ENST00000223084 IDEP14735 1019 aa13.92□□□□□ -0.18
LSM5-201ENST00000223084 IRS1P35568 1242 aa13.92□□□□□ -0.18
LSM5-201ENST00000223084 BCAR1P56945 870 aa13.92□□□□□ -0.18
LSM5-201ENST00000223084 SKIV2LQ15477 1246 aaKnown RBP13.92□□□□□ -0.18
LSM5-201ENST00000223084 ZC2HC1CQ53FD0 456 aaPredicted RBP13.92□□□□□ -0.18
LSM5-201ENST00000223084 FAM178BQ8IXR5 827 aa13.92□□□□□ -0.18
LSM5-201ENST00000223084 HACE1Q8IYU2 909 aa13.92□□□□□ -0.18
LSM5-201ENST00000223084 CEP120Q8N960 986 aa13.92□□□□□ -0.18
LSM5-201ENST00000223084 IQUBQ8NA54 791 aa13.92□□□□□ -0.18
LSM5-201ENST00000223084 POF1BQ8WVV4 589 aa13.92□□□□□ -0.18
LSM5-201ENST00000223084 CDT1Q9H211 546 aa13.92□□□□□ -0.18
LSM5-201ENST00000223084 PTPRHQ9HD43 1115 aa13.92□□□□□ -0.18
LSM5-201ENST00000223084 UBN1Q9NPG3 1134 aa13.92□□□□□ -0.18
LSM5-201ENST00000223084 SPG21Q9NZD8 308 aa13.92□□□□□ -0.18
LSM5-201ENST00000223084 KCNH3Q9ULD8 1083 aa13.92□□□□□ -0.18
LSM5-201ENST00000223084 PCDHGC5Q9Y5F6 944 aa13.92□□□□□ -0.18
LSM5-201ENST00000223084 TDRD15B5MCY1 1934 aaKnown RBP13.92□□□□□ -0.18
LSM5-201ENST00000223084 REV3LO60673 3130 aa13.91□□□□□ -0.18
LSM5-201ENST00000223084 A0A1B0GVL5 298 aa13.91□□□□□ -0.18
LSM5-201ENST00000223084 ABLIM1O14639 778 aa13.91□□□□□ -0.18
LSM5-201ENST00000223084 RECQL4O94761 1208 aa13.91□□□□□ -0.18
LSM5-201ENST00000223084 GALTP07902 379 aa13.91□□□□□ -0.18
LSM5-201ENST00000223084 PROZP22891 400 aa13.91□□□□□ -0.18
LSM5-201ENST00000223084 SLC11A1P49279 550 aa13.91□□□□□ -0.18
LSM5-201ENST00000223084 ALDH7A1P49419 539 aaKnown RBP13.91□□□□□ -0.18
LSM5-201ENST00000223084 OSTNP61366 133 aa13.91□□□□□ -0.18
LSM5-201ENST00000223084 DCAF4L1Q3SXM0 396 aa13.91□□□□□ -0.18
LSM5-201ENST00000223084 ZNF568Q3ZCX4 644 aa13.91□□□□□ -0.18
LSM5-201ENST00000223084 TCEAL5Q5H9L2 206 aa13.91□□□□□ -0.18
LSM5-201ENST00000223084 ADALQ6DHV7 355 aa13.91□□□□□ -0.18
LSM5-201ENST00000223084 TMEM173Q86WV6 379 aaPredicted RBP13.91□□□□□ -0.18
LSM5-201ENST00000223084 SLC39A11Q8N1S5 342 aa13.91□□□□□ -0.18
LSM5-201ENST00000223084 GSTCDQ8NEC7 633 aa13.91□□□□□ -0.18
LSM5-201ENST00000223084 FAM193BQ96PV7 902 aaPredicted RBP13.91□□□□□ -0.18
LSM5-201ENST00000223084 TCHPQ9BT92 498 aa13.91□□□□□ -0.18
LSM5-201ENST00000223084 SCAND2PQ9GZW5 306 aaPredicted RBP13.91□□□□□ -0.18
LSM5-201ENST00000223084 PANK4Q9NVE7 773 aa13.91□□□□□ -0.18
LSM5-201ENST00000223084 KBTBD4Q9NVX7 518 aa13.91□□□□□ -0.18
LSM5-201ENST00000223084 KANSL3Q9P2N6 904 aa13.91□□□□□ -0.18
LSM5-201ENST00000223084 ANKFY1Q9P2R3 1169 aa13.91□□□□□ -0.18
LSM5-201ENST00000223084 TBX20Q9UMR3 447 aa13.91□□□□□ -0.18
LSM5-201ENST00000223084 H0YCG3 227 aa13.9□□□□□ -0.18
LSM5-201ENST00000223084 INPPL1O15357 1258 aa13.9□□□□□ -0.18
LSM5-201ENST00000223084 PFKFB1P16118 471 aa13.9□□□□□ -0.18
LSM5-201ENST00000223084 CMA1P23946 247 aa13.9□□□□□ -0.18
LSM5-201ENST00000223084 CASP1P29466 404 aa13.9□□□□□ -0.18
LSM5-201ENST00000223084 CSPP1Q1MSJ5 1256 aa13.9□□□□□ -0.18
LSM5-201ENST00000223084 SEZ6Q53EL9 994 aa13.9□□□□□ -0.18
LSM5-201ENST00000223084 HERC4Q5GLZ8 1057 aaPredicted RBP13.9□□□□□ -0.18
LSM5-201ENST00000223084 MPZL3Q6UWV2 235 aa13.9□□□□□ -0.18
LSM5-201ENST00000223084 COLGALT2Q8IYK4 626 aa13.9□□□□□ -0.18
LSM5-201ENST00000223084 GRAMD1CQ8IYS0 662 aa13.9□□□□□ -0.18
LSM5-201ENST00000223084 BCL7CQ8WUZ0 217 aaPredicted RBP13.9□□□□□ -0.18
LSM5-201ENST00000223084 RSPH1Q8WYR4 309 aa13.9□□□□□ -0.18
LSM5-201ENST00000223084 MRPS27Q92552 414 aaKnown RBP13.9□□□□□ -0.18
LSM5-201ENST00000223084 BICD1Q96G01 975 aa13.9□□□□□ -0.18
LSM5-201ENST00000223084 FGFBP2Q9BYJ0 223 aa13.9□□□□□ -0.18
LSM5-201ENST00000223084 HAPLN2Q9GZV7 340 aa13.9□□□□□ -0.18
LSM5-201ENST00000223084 LMAN2LQ9H0V9 348 aa13.9□□□□□ -0.18
LSM5-201ENST00000223084 TNMDQ9H2S6 317 aa13.9□□□□□ -0.18
LSM5-201ENST00000223084 IKZF4Q9H2S9 585 aa13.9□□□□□ -0.18
LSM5-201ENST00000223084 CUEDC2Q9H467 287 aa13.9□□□□□ -0.18
LSM5-201ENST00000223084 CACNG4Q9UBN1 327 aa13.9□□□□□ -0.18
LSM5-201ENST00000223084 SERTAD1Q9UHV2 236 aa13.9□□□□□ -0.18
LSM5-201ENST00000223084 FRMD3A2A2Y4 597 aa13.89□□□□□ -0.19
LSM5-201ENST00000223084 PTGESO14684 152 aa13.89□□□□□ -0.19
LSM5-201ENST00000223084 TOM1L1O75674 476 aa13.89□□□□□ -0.19
LSM5-201ENST00000223084 MCF2P10911 925 aa13.89□□□□□ -0.19
LSM5-201ENST00000223084 GAP43P17677 238 aa13.89□□□□□ -0.19
LSM5-201ENST00000223084 PPM1AP35813 382 aa13.89□□□□□ -0.19
LSM5-201ENST00000223084 ANP32AP39687 249 aaKnown RBP13.89□□□□□ -0.19
LSM5-201ENST00000223084 MATR3P43243 847 aaKnown RBP eCLIP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms