RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 AtmQ62388 3066 aa8.94□□□□□ -0.98
Trim40-203ENSMUST00000172711 Myh11O08638 1972 aa8.94□□□□□ -0.98
Trim40-203ENSMUST00000172711 Zscan4-ps2A0A1C7CYU6 506 aa8.94□□□□□ -0.98
Trim40-203ENSMUST00000172711 Zfp40B1B1D3 796 aa8.94□□□□□ -0.98
Trim40-203ENSMUST00000172711 Samd1D3YXK1 519 aa8.94□□□□□ -0.98
Trim40-203ENSMUST00000172711 Fam170bE9PXT9 378 aa8.94□□□□□ -0.98
Trim40-203ENSMUST00000172711 Gm4841E9QAA8 417 aa8.94□□□□□ -0.98
Trim40-203ENSMUST00000172711 Per1O35973 1291 aa8.94□□□□□ -0.98
Trim40-203ENSMUST00000172711 Mllt10O54826 1068 aa8.94□□□□□ -0.98
Trim40-203ENSMUST00000172711 Dpep1P31428 410 aa8.94□□□□□ -0.98
Trim40-203ENSMUST00000172711 Edem3Q2HXL6 931 aa8.94□□□□□ -0.98
Trim40-203ENSMUST00000172711 Ppp1r12cQ3UMT1 782 aa8.94□□□□□ -0.98
Trim40-203ENSMUST00000172711 Cdkl5Q3UTQ8 938 aa8.94□□□□□ -0.98
Trim40-203ENSMUST00000172711 Klra7Q60654 280 aa8.94□□□□□ -0.98
Trim40-203ENSMUST00000172711 Jak2Q62120 1129 aa8.94□□□□□ -0.98
Trim40-203ENSMUST00000172711 Lrrn2Q6PHP6 730 aa8.94□□□□□ -0.98
Trim40-203ENSMUST00000172711 Casd1Q7TN73 797 aa8.94□□□□□ -0.98
Trim40-203ENSMUST00000172711 Raver2Q7TPD6 673 aa8.94□□□□□ -0.98
Trim40-203ENSMUST00000172711 C2cd2lQ80X80 706 aa8.94□□□□□ -0.98
Trim40-203ENSMUST00000172711 PolrmtQ8BKF1 1207 aaKnown RBP8.94□□□□□ -0.98
Trim40-203ENSMUST00000172711 Larp6Q8BN59 492 aa8.94□□□□□ -0.98
Trim40-203ENSMUST00000172711 GancQ8BVW0 898 aa8.94□□□□□ -0.98
Trim40-203ENSMUST00000172711 Rpl17Q9CPR4 184 aaKnown RBP8.94□□□□□ -0.98
Trim40-203ENSMUST00000172711 Dock1Q8BUR4 1865 aa8.94□□□□□ -0.98
Trim40-203ENSMUST00000172711 Alpk2Q91ZB0 2144 aa8.93□□□□□ -0.98
Trim40-203ENSMUST00000172711 Gvin1Q80SU7 2427 aa8.93□□□□□ -0.98
Trim40-203ENSMUST00000172711 Vwa8Q8CC88 1905 aa8.93□□□□□ -0.98
Trim40-203ENSMUST00000172711 Lilra6A0A0B4J1F3 663 aa8.93□□□□□ -0.98
Trim40-203ENSMUST00000172711 Hk1P17710 974 aa8.93□□□□□ -0.98
Trim40-203ENSMUST00000172711 Slc10a3P21129 473 aa8.93□□□□□ -0.98
Trim40-203ENSMUST00000172711 Dnm1P39053 867 aa8.93□□□□□ -0.98
Trim40-203ENSMUST00000172711 Stat1P42225 749 aa8.93□□□□□ -0.98
Trim40-203ENSMUST00000172711 Mier3Q3UHF3 551 aa8.93□□□□□ -0.98
Trim40-203ENSMUST00000172711 Cep63Q3UPP8 700 aa8.93□□□□□ -0.98
Trim40-203ENSMUST00000172711 MaeaQ4VC33 396 aa8.93□□□□□ -0.98
Trim40-203ENSMUST00000172711 Kcnk12Q76M80 430 aa8.93□□□□□ -0.98
Trim40-203ENSMUST00000172711 Akap7Q7TN79 314 aa8.93□□□□□ -0.98
Trim40-203ENSMUST00000172711 HomezQ80W88 542 aa8.93□□□□□ -0.98
Trim40-203ENSMUST00000172711 GnsQ8BFR4 544 aa8.93□□□□□ -0.98
Trim40-203ENSMUST00000172711 Mical2Q8BML1 960 aa8.93□□□□□ -0.98
Trim40-203ENSMUST00000172711 Ppme1Q8BVQ5 386 aa8.93□□□□□ -0.98
Trim40-203ENSMUST00000172711 Kank2Q8BX02 843 aa8.93□□□□□ -0.98
Trim40-203ENSMUST00000172711 GlyctkQ8QZY2 523 aa8.93□□□□□ -0.98
Trim40-203ENSMUST00000172711 Upb1Q8VC97 393 aa8.93□□□□□ -0.98
Trim40-203ENSMUST00000172711 Polr3fQ921X6 316 aa8.93□□□□□ -0.98
Trim40-203ENSMUST00000172711 Spdl1Q923A2 608 aa8.93□□□□□ -0.98
Trim40-203ENSMUST00000172711 Ggt7Q99JP7 662 aa8.93□□□□□ -0.98
Trim40-203ENSMUST00000172711 Josd2Q9CR30 188 aa8.93□□□□□ -0.98
Trim40-203ENSMUST00000172711 Mtif3Q9CZD5 276 aa8.93□□□□□ -0.98
Trim40-203ENSMUST00000172711 Scyl1Q9EQC5 806 aaKnown RBP8.93□□□□□ -0.98
Trim40-203ENSMUST00000172711 Cabp5Q9JLK3 173 aa8.93□□□□□ -0.98
Trim40-203ENSMUST00000172711 Morc1Q9WVL5 950 aa8.93□□□□□ -0.98
Trim40-203ENSMUST00000172711 1700017N19RikA0A087WPJ1 469 aa8.92□□□□□ -0.98
Trim40-203ENSMUST00000172711 A0A0U1RNP2 1173 aa8.92□□□□□ -0.98
Trim40-203ENSMUST00000172711 Slc6a16A0A1L1SR47 742 aa8.92□□□□□ -0.98
Trim40-203ENSMUST00000172711 Scp2P32020 547 aaKnown RBP8.92□□□□□ -0.98
Trim40-203ENSMUST00000172711 Sash1P59808 1230 aa8.92□□□□□ -0.98
Trim40-203ENSMUST00000172711 Hoxd13P70217 339 aa8.92□□□□□ -0.98
Trim40-203ENSMUST00000172711 Adcy6Q01341 1165 aa8.92□□□□□ -0.98
Trim40-203ENSMUST00000172711 Atf4Q06507 349 aa8.92□□□□□ -0.98
Trim40-203ENSMUST00000172711 Spdye4aQ5IBH6 268 aa8.92□□□□□ -0.98
Trim40-203ENSMUST00000172711 PkdccQ5RJI4 492 aa8.92□□□□□ -0.98
Trim40-203ENSMUST00000172711 Ppp1r13bQ62415 1087 aa8.92□□□□□ -0.98
Trim40-203ENSMUST00000172711 ToporsQ80Z37 1033 aa8.92□□□□□ -0.98
Trim40-203ENSMUST00000172711 Pnma2Q8BHK0 365 aa8.92□□□□□ -0.98
Trim40-203ENSMUST00000172711 Usp1Q8BJQ2 784 aa8.92□□□□□ -0.98
Trim40-203ENSMUST00000172711 Rab11fip4Q8BQP8 635 aa8.92□□□□□ -0.98
Trim40-203ENSMUST00000172711 Tmem161aQ8VCA6 480 aa8.92□□□□□ -0.98
Trim40-203ENSMUST00000172711 Ppp2r5dQ91V89 594 aa8.92□□□□□ -0.98
Trim40-203ENSMUST00000172711 Rxfp2Q91ZZ5 737 aa8.92□□□□□ -0.98
Trim40-203ENSMUST00000172711 Ndufaf7Q9CWG8 436 aa8.92□□□□□ -0.98
Trim40-203ENSMUST00000172711 TsaccQ9DA44 124 aa8.92□□□□□ -0.98
Trim40-203ENSMUST00000172711 Atp13a1Q9EPE9 1200 aaKnown RBP8.92□□□□□ -0.98
Trim40-203ENSMUST00000172711 CrebbpP45481 2441 aa8.92□□□□□ -0.98
Trim40-203ENSMUST00000172711 MarcksP26645 309 aaKnown RBP8.91□□□□□ -0.98
Trim40-203ENSMUST00000172711 Ercc5P35689 1170 aa8.91□□□□□ -0.98
Trim40-203ENSMUST00000172711 AdprhP54923 362 aa8.91□□□□□ -0.98
Trim40-203ENSMUST00000172711 EvcP57680 1005 aa8.91□□□□□ -0.98
Trim40-203ENSMUST00000172711 Rplp2P99027 115 aaKnown RBP8.91□□□□□ -0.98
Trim40-203ENSMUST00000172711 Smcr8Q3UMB5 935 aa8.91□□□□□ -0.98
Trim40-203ENSMUST00000172711 Vwa3aQ3UVV9 1148 aa8.91□□□□□ -0.98
Trim40-203ENSMUST00000172711 Zbtb8osQ505B7 168 aa8.91□□□□□ -0.98
Trim40-203ENSMUST00000172711 Ssr4Q62186 172 aa8.91□□□□□ -0.98
Trim40-203ENSMUST00000172711 Ccdc189Q6NZQ0 333 aa8.91□□□□□ -0.98
Trim40-203ENSMUST00000172711 Smarca1Q6PGB8 1046 aa8.91□□□□□ -0.98
Trim40-203ENSMUST00000172711 Nap1l4Q78ZA7 375 aaKnown RBP8.91□□□□□ -0.98
Trim40-203ENSMUST00000172711 Dzip3Q7TPV2 1204 aa8.91□□□□□ -0.98
Trim40-203ENSMUST00000172711 Nol12Q8BG17 217 aa8.91□□□□□ -0.98
Trim40-203ENSMUST00000172711 SgczQ8BX51 311 aa8.91□□□□□ -0.98
Trim40-203ENSMUST00000172711 Ttc39bQ8BYY4 617 aa8.91□□□□□ -0.98
Trim40-203ENSMUST00000172711 Gucd1Q8BZI6 239 aa8.91□□□□□ -0.98
Trim40-203ENSMUST00000172711 Gpr61Q8C010 449 aa8.91□□□□□ -0.98
Trim40-203ENSMUST00000172711 Bag4Q8CI61 457 aa8.91□□□□□ -0.98
Trim40-203ENSMUST00000172711 Rell1Q8K2J7 272 aa8.91□□□□□ -0.98
Trim40-203ENSMUST00000172711 Terf2ipQ91VL8 393 aa8.91□□□□□ -0.98
Trim40-203ENSMUST00000172711 Phtf1Q9QZ09 761 aa8.91□□□□□ -0.98
Trim40-203ENSMUST00000172711 NcdnQ9Z0E0 729 aa8.91□□□□□ -0.98
Trim40-203ENSMUST00000172711 BC049352E9Q2Z6 85 aa8.9□□□□□ -0.98
Trim40-203ENSMUST00000172711 Aimp1P31230 310 aaKnown RBP8.9□□□□□ -0.98
Trim40-203ENSMUST00000172711 Anapc15P60007 132 aa8.9□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms