RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Nmnat1Q9EPA7 285 aa13.43□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Gfra4Q9JJT2 260 aa13.43□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 1700018F24RikB2RW27 314 aa13.42□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 SafbD3YXK2 937 aaKnown RBP13.42□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Krt78E9Q0F0 1068 aa13.42□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Psmc3O88685 442 aa13.42□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Vti1aO89116 217 aa13.42□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Slc10a3P21129 473 aa13.42□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Pcsk1P63239 753 aa13.42□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Fgfr4Q03142 799 aa13.42□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Leo1Q5XJE5 667 aa13.42□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Elavl4Q61701 385 aaKnown RBP13.42□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 EfsQ64355 560 aa13.42□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 GartQ64737 1010 aa13.42□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Krba1Q6NXZ1 1043 aa13.42□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Hdac4Q6NZM9 1076 aa13.42□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Pnma2Q8BHK0 365 aa13.42□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Zdhhc14Q8BQQ1 489 aa13.42□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Q8CCC3 530 aa13.42□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Ablim1Q8K4G5 861 aa13.42□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 BrdtQ91Y44 956 aa13.42□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Sdcbp2Q99JZ0 292 aa13.42□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Stx6Q9JKK1 255 aa13.42□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Homer2Q9QWW1 354 aa13.42□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Clic4Q9QYB1 253 aa13.42□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Hebp1Q9R257 190 aa13.42□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Cntnap4Q99P47 1310 aa13.41□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Olfr663A0A1B0GSI9 319 aa13.41□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Gm4985A2ALC6 410 aa13.41□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Trappc11B2RXC1 1133 aa13.41□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Tcp10bE9PYJ0 438 aa13.41□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Tcp10cE9Q046 482 aa13.41□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Mdm4O35618 489 aa13.41□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Fgfr1P16092 822 aa13.41□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Grin1P35438 938 aa13.41□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Znf827Q505G8 1078 aa13.41□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Shroom1Q5SX79 823 aa13.41□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Tnpo1Q8BFY9 898 aaKnown RBP13.41□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Matr3Q8K310 846 aaKnown RBP13.41□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Pstpip2Q99M15 334 aa13.41□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Kremen1Q99N43 473 aa13.41□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 MajinQ9D992 256 aa13.41□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Olr1Q9EQ09 363 aa13.41□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Doc2gQ9ESN1 387 aa13.41□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Ly6g6dQ9Z1Q3 135 aa13.41□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Rp1P56716 2095 aa13.41□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Cntnap5aQ0V8T9 1304 aa13.4□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Gm4756A0A140LIS8 335 aa13.4□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 DohhA0A1Y7VJ29 135 aa13.4□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 P4hbP09103 509 aaKnown RBP13.4□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Msh3P13705 1091 aa13.4□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Usp10P52479 792 aaKnown RBP13.4□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Tmprss9P69525 1065 aa13.4□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Tmc5Q32NZ6 967 aa13.4□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Smyd5Q3TYX3 416 aa13.4□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Smcr8Q3UMB5 935 aa13.4□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Ubash3aQ3V3E1 624 aa13.4□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Cacna2d4Q5RJF7 1116 aa13.4□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Shkbp1Q6P7W2 704 aa13.4□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Dusp9Q7TNL7 452 aa13.4□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Olfr392Q7TRX6 312 aa13.4□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Arl14epQ8BIX3 276 aa13.4□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 6820408C15RikQ8BJX2 354 aa13.4□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Tcaf1Q8BNE1 924 aa13.4□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 SheQ8BSD5 492 aa13.4□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Gpr61Q8C010 449 aa13.4□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Tbc1d14Q8CGA2 694 aa13.4□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Calhm5Q8R100 309 aa13.4□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Sf3b1Q99NB9 1304 aaKnown RBP13.39□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Lrrc37aB1AWG4 3215 aa13.39□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Plcb2A3KGF7 1181 aa13.39□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Gm3002E9PW72 216 aa13.39□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Heatr4E9Q357 955 aa13.39□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Rab11fip2G3XA57 512 aa13.39□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Taf4bG5E8Z2 855 aa13.39□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Gm17535J3KMR8 224 aa13.39□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Vmn2r71L7N2D8 855 aa13.39□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Exoc4O35382 975 aa13.39□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 IkbkbO88351 757 aa13.39□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 P01878 344 aa13.39□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Gpr15Q0VDU3 360 aa13.39□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Ttc9Q3V038 219 aa13.39□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Snx25Q3ZT31 840 aa13.39□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Ssr4Q62186 172 aa13.39□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Cpa4Q6P8K8 420 aa13.39□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Rad9bQ6WBX7 403 aa13.39□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Csrnp2Q8BGQ2 534 aa13.39□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 SgczQ8BX51 311 aa13.39□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Tada2aQ8CHV6 443 aa13.39□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Olfr30Q8VGD8 315 aa13.39□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Slc14a1Q8VHL0 384 aa13.39□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 YarsQ91WQ3 528 aaKnown RBP13.39□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Pip4k2cQ91XU3 421 aa13.39□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Vps16Q920Q4 839 aa13.39□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Mrps25Q9D125 171 aaKnown RBP13.39□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Ephx1Q9D379 455 aa13.39□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Olig1Q9JKN5 260 aa13.39□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Extl1Q9JKV7 669 aa13.39□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Gyg1Q9R062 333 aa13.39□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 1700064H15RikD3Z4D4 81 aa13.38□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 26.8 ms