RNA–Protein interactions for RNA: YPR101W

SNT309, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene SNT309, Length 528 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNT309	YPR101W	FMP48	P53233	369 aa		6.28	□□□□□ -1.4
SNT309	YPR101W	SNO2	P53823	222 aa		6.28	□□□□□ -1.4
SNT309	YPR101W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	6.28	□□□□□ -1.4	not detected
SNT309	YPR101W	YHM2	Q04013	314 aa		6.28	□□□□□ -1.4
SNT309	YPR101W	YOR378W	Q08902	515 aa		6.28	□□□□□ -1.4
SNT309	YPR101W	MMT2	Q08970	484 aa		6.28	□□□□□ -1.4
SNT309	YPR101W	PHO2	P07269	559 aa		6.27	□□□□□ -1.41
SNT309	YPR101W	GAL7	P08431	366 aa		6.27	□□□□□ -1.41
SNT309	YPR101W	PRB1	P09232	635 aa		6.27	□□□□□ -1.41
SNT309	YPR101W	STE50	P25344	346 aa		6.27	□□□□□ -1.41
SNT309	YPR101W	CWH43	P25618	953 aa		6.27	□□□□□ -1.41
SNT309	YPR101W	PRE2	P30656	287 aa	Known RBP	6.27	□□□□□ -1.41
SNT309	YPR101W	LDS1	P31379	325 aa		6.27	□□□□□ -1.41
SNT309	YPR101W	YKL071W	P36086	256 aa		6.27	□□□□□ -1.41
SNT309	YPR101W	AUR1	P36107	401 aa	Predicted RBP	6.27	□□□□□ -1.41
SNT309	YPR101W	VPS51	P36116	164 aa		6.27	□□□□□ -1.41
SNT309	YPR101W	BET3	P36149	193 aa		6.27	□□□□□ -1.41
SNT309	YPR101W	PRP39	P39682	629 aa	Known RBP	6.27	□□□□□ -1.41
SNT309	YPR101W	GCV3	P39726	170 aa	Predicted RBP	6.27	□□□□□ -1.41
SNT309	YPR101W	SYS1	P41544	203 aa		6.27	□□□□□ -1.41
SNT309	YPR101W	HHO1	P53551	258 aa		6.27	□□□□□ -1.41
SNT309	YPR101W	YNR062C	P53748	327 aa		6.27	□□□□□ -1.41
SNT309	YPR101W	CWC24	P53769	259 aa		6.27	□□□□□ -1.41
SNT309	YPR101W	NRK1	P53915	240 aa		6.27	□□□□□ -1.41
SNT309	YPR101W	SPR28	Q04921	423 aa		6.27	□□□□□ -1.41
SNT309	YPR101W	NMA1	Q06178	401 aa	Known RBP	6.27	□□□□□ -1.41
SNT309	YPR101W	YLR352W	Q06479	807 aa		6.27	□□□□□ -1.41
SNT309	YPR101W	YPR172W	Q06608	200 aa		6.27	□□□□□ -1.41
SNT309	YPR101W	NAG1	Q8TGN9	163 aa		6.27	□□□□□ -1.41
SNT309	YPR101W	TDH2	P00358	332 aa	Known RBP	6.26	□□□□□ -1.41
SNT309	YPR101W	HIP1	P06775	603 aa		6.26	□□□□□ -1.41
SNT309	YPR101W	MRPL33	P20084	86 aa		6.26	□□□□□ -1.41
SNT309	YPR101W	PBN1	P25580	416 aa		6.26	□□□□□ -1.41
SNT309	YPR101W	MRP20	P32387	263 aa		6.26	□□□□□ -1.41
SNT309	YPR101W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	6.26	□□□□□ -1.41	not detected
SNT309	YPR101W	ISC10	P32645	267 aa		6.26	□□□□□ -1.41
SNT309	YPR101W	SRY1	P36007	326 aa		6.26	□□□□□ -1.41
SNT309	YPR101W	EHT1	P38295	451 aa		6.26	□□□□□ -1.41
SNT309	YPR101W	MTC4	P38335	694 aa	Known RBP	6.26	□□□□□ -1.41
SNT309	YPR101W	HXT5	P38695	592 aa		6.26	□□□□□ -1.41
SNT309	YPR101W	LAG1	P38703	411 aa		6.26	□□□□□ -1.41
SNT309	YPR101W	RPP1	P38786	293 aa		6.26	□□□□□ -1.41
SNT309	YPR101W	ANS1	P38832	159 aa		6.26	□□□□□ -1.41
SNT309	YPR101W	YAL037W	P39728	267 aa		6.26	□□□□□ -1.41
SNT309	YPR101W	PZF1	P39933	429 aa		6.26	□□□□□ -1.41
SNT309	YPR101W	LEM3	P42838	414 aa		6.26	□□□□□ -1.41
SNT309	YPR101W	SLS1	P42900	643 aa		6.26	□□□□□ -1.41
SNT309	YPR101W	LSB3	P43603	459 aa	Known RBP	6.26	□□□□□ -1.41
SNT309	YPR101W	LYS20	P48570	428 aa	Known RBP	6.26	□□□□□ -1.41
SNT309	YPR101W	COQ5	P49017	307 aa		6.26	□□□□□ -1.41
SNT309	YPR101W	FHN1	P53279	174 aa		6.26	□□□□□ -1.41
SNT309	YPR101W	RSM27	P53305	110 aa		6.26	□□□□□ -1.41
SNT309	YPR101W	OGG1	P53397	376 aa	Predicted RBP	6.26	□□□□□ -1.41
SNT309	YPR101W	ARG5,6	Q01217	863 aa		6.26	□□□□□ -1.41
SNT309	YPR101W	ODC1	Q03028	310 aa		6.26	□□□□□ -1.41
SNT309	YPR101W	MRPL51	Q06090	140 aa	Predicted RBP	6.26	□□□□□ -1.41
SNT309	YPR101W	DXO1	Q06349	442 aa		6.26	□□□□□ -1.41
SNT309	YPR101W	YOR365C	Q08844	703 aa		6.26	□□□□□ -1.41
SNT309	YPR101W	SRO7	Q12038	1033 aa		6.26	□□□□□ -1.41
SNT309	YPR101W	LYS21	Q12122	440 aa	Known RBP	6.26	□□□□□ -1.41
SNT309	YPR101W	AI1	P03875	834 aa		6.25	□□□□□ -1.41
SNT309	YPR101W	YPK2	P18961	677 aa		6.25	□□□□□ -1.41
SNT309	YPR101W	GPI12	P23797	304 aa		6.25	□□□□□ -1.41
SNT309	YPR101W	PRO1	P32264	428 aa		6.25	□□□□□ -1.41
SNT309	YPR101W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	6.25	□□□□□ -1.41	not detected
SNT309	YPR101W	PTR2	P32901	601 aa		6.25	□□□□□ -1.41
SNT309	YPR101W	GPX1	P36014	167 aa		6.25	□□□□□ -1.41
SNT309	YPR101W	FMP46	P36141	133 aa	Known RBP	6.25	□□□□□ -1.41
SNT309	YPR101W	MRPL16	P38064	232 aa		6.25	□□□□□ -1.41
SNT309	YPR101W	YPC1	P38298	316 aa		6.25	□□□□□ -1.41
SNT309	YPR101W	SKN7	P38889	622 aa		6.25	□□□□□ -1.41
SNT309	YPR101W	ZIM17	P42844	174 aa		6.25	□□□□□ -1.41
SNT309	YPR101W	CAF16	P43569	289 aa		6.25	□□□□□ -1.41
SNT309	YPR101W	SRB7	P47822	140 aa		6.25	□□□□□ -1.41
SNT309	YPR101W	SNN1	P48232	102 aa		6.25	□□□□□ -1.41
SNT309	YPR101W	PHO23	P50947	330 aa		6.25	□□□□□ -1.41
SNT309	YPR101W	YGL159W	P53110	370 aa		6.25	□□□□□ -1.41
SNT309	YPR101W	YGR042W	P53227	271 aa		6.25	□□□□□ -1.41
SNT309	YPR101W	TPC1	P53257	314 aa		6.25	□□□□□ -1.41
SNT309	YPR101W	SMX3	P54999	86 aa	Predicted RBP	6.25	□□□□□ -1.41
SNT309	YPR101W	CTF19	Q02732	369 aa		6.25	□□□□□ -1.41
SNT309	YPR101W	CAC2	Q04199	468 aa		6.25	□□□□□ -1.41
SNT309	YPR101W	NOC4	Q06512	552 aa	Predicted RBP	6.25	□□□□□ -1.41
SNT309	YPR101W	IRC13	Q08630	104 aa		6.25	□□□□□ -1.41
SNT309	YPR101W	YRM1	Q12340	786 aa		6.25	□□□□□ -1.41
SNT309	YPR101W	EAF3	Q12432	401 aa		6.25	□□□□□ -1.41
SNT309	YPR101W	RRI1	Q12468	440 aa		6.25	□□□□□ -1.41
SNT309	YPR101W	CET1	O13297	549 aa	Predicted RBP	6.24	□□□□□ -1.41
SNT309	YPR101W	MATALPHA1	P0CY06	175 aa		6.24	□□□□□ -1.41
SNT309	YPR101W	HMLALPHA1	P0CY07	175 aa		6.24	□□□□□ -1.41
SNT309	YPR101W	CDC34	P14682	295 aa		6.24	□□□□□ -1.41
SNT309	YPR101W	NUP1	P20676	1076 aa		6.24	□□□□□ -1.41
SNT309	YPR101W	SEC22	P22214	214 aa		6.24	□□□□□ -1.41
SNT309	YPR101W	PTP1	P25044	335 aa		6.24	□□□□□ -1.41
SNT309	YPR101W	RNQ1	P25367	405 aa		6.24	□□□□□ -1.41
SNT309	YPR101W	PMT2	P31382	759 aa		6.24	□□□□□ -1.41
SNT309	YPR101W	TRS65	P32893	560 aa		6.24	□□□□□ -1.41
SNT309	YPR101W	ALG3	P38179	458 aa		6.24	□□□□□ -1.41
SNT309	YPR101W	MNL1	P38888	796 aa		6.24	□□□□□ -1.41
SNT309	YPR101W	ASP1	P38986	381 aa	Predicted RBP	6.24	□□□□□ -1.41

Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms