RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W DPB11P47027 764 aaPredicted RBP2.04□□□□□ -2.08
SEC16YPL085W NPY1P53164 384 aa2.04□□□□□ -2.08
SEC16YPL085W PBP1P53297 722 aaKnown RBP2.04□□□□□ -2.08
SEC16YPL085W PEX13P80667 386 aa2.04□□□□□ -2.08
SEC16YPL085W EKI1Q03764 534 aa2.04□□□□□ -2.08
SEC16YPL085W TEN1Q07921 160 aa2.04□□□□□ -2.08
SEC16YPL085W IRC10Q08118 586 aa2.04□□□□□ -2.08
SEC16YPL085W SKI7Q08491 747 aaPredicted RBP2.04□□□□□ -2.08
SEC16YPL085W NDD1Q08887 554 aa2.04□□□□□ -2.08
SEC16YPL085W TMA46Q12000 345 aaKnown RBP2.04□□□□□ -2.08
SEC16YPL085W AKR2Q12013 749 aa2.04□□□□□ -2.08
SEC16YPL085W PST2Q12335 198 aaKnown RBP2.04□□□□□ -2.08
SEC16YPL085W GAL7P08431 366 aa2.04□□□□□ -2.08
SEC16YPL085W SAC7P17121 654 aa2.04□□□□□ -2.08
SEC16YPL085W ART10P18634 518 aaKnown RBP2.04□□□□□ -2.08
SEC16YPL085W YMR31P19955 123 aa2.04□□□□□ -2.08
SEC16YPL085W YHR131CP38835 850 aa2.04□□□□□ -2.08
SEC16YPL085W YHR177WP38867 453 aa2.04□□□□□ -2.08
SEC16YPL085W MRX5P47007 382 aa2.04□□□□□ -2.08
SEC16YPL085W MKC7P53379 596 aa2.04□□□□□ -2.08
SEC16YPL085W RHO4Q00246 291 aa2.04□□□□□ -2.08
SEC16YPL085W RMI1Q02685 241 aa2.04□□□□□ -2.08
SEC16YPL085W YMR254CQ04838 102 aa2.04□□□□□ -2.08
SEC16YPL085W HRI1Q05905 244 aaKnown RBP2.04□□□□□ -2.08
SEC16YPL085W FAR10Q06001 478 aa2.04□□□□□ -2.08
SEC16YPL085W ENB1Q08299 606 aa2.04□□□□□ -2.08
SEC16YPL085W SNU23Q12368 194 aaPredicted RBP2.04□□□□□ -2.08
SEC16YPL085W AIM45Q12480 344 aaKnown RBP2.04□□□□□ -2.08
SEC16YPL085W MHT1Q12525 324 aa2.04□□□□□ -2.08
SEC16YPL085W MF(ALPHA)1P01149 165 aa2.03□□□□□ -2.08
SEC16YPL085W ASK1P35734 292 aa2.03□□□□□ -2.08
SEC16YPL085W YPT31P38555 223 aaKnown RBP2.03□□□□□ -2.08
SEC16YPL085W YHR035WP38769 630 aa2.03□□□□□ -2.08
SEC16YPL085W IKS1P47042 667 aa2.03□□□□□ -2.08
SEC16YPL085W STB4P50104 949 aa2.03□□□□□ -2.08
SEC16YPL085W REG1Q00816 1014 aa2.03□□□□□ -2.08
SEC16YPL085W YDR391CQ04170 232 aa2.03□□□□□ -2.08
SEC16YPL085W ELP6Q04868 273 aa2.03□□□□□ -2.08
SEC16YPL085W ATG33Q06485 197 aa2.03□□□□□ -2.08
SEC16YPL085W SLF1Q12034 447 aaKnown RBP2.03□□□□□ -2.08
SEC16YPL085W YDR461C-AQ2V2P7 80 aa2.03□□□□□ -2.08
SEC16YPL085W FUR4P05316 633 aaKnown RBP2.03□□□□□ -2.08
SEC16YPL085W RPL30P14120 105 aaKnown RBP2.03□□□□□ -2.08
SEC16YPL085W SPO13P23624 291 aa2.03□□□□□ -2.08
SEC16YPL085W RER1P25560 188 aa2.03□□□□□ -2.08
SEC16YPL085W VAC17P25591 423 aa2.03□□□□□ -2.08
SEC16YPL085W NUD1P32336 851 aa2.03□□□□□ -2.08
SEC16YPL085W YNK1P36010 153 aaKnown RBP2.03□□□□□ -2.08
SEC16YPL085W ECM4P36156 370 aa2.03□□□□□ -2.08
SEC16YPL085W AGP2P38090 596 aa2.03□□□□□ -2.08
SEC16YPL085W RPP1P38786 293 aa2.03□□□□□ -2.08
SEC16YPL085W YEL073CP39974 107 aa2.03□□□□□ -2.08
SEC16YPL085W IRC22P40006 225 aa2.03□□□□□ -2.08
SEC16YPL085W ATG18P43601 500 aa2.03□□□□□ -2.08
SEC16YPL085W SNG1P46950 547 aa2.03□□□□□ -2.08
SEC16YPL085W RPA14P50106 137 aa2.03□□□□□ -2.08
SEC16YPL085W TNA1P53322 534 aa2.03□□□□□ -2.08
SEC16YPL085W PAU12P53343 120 aa2.03□□□□□ -2.08
SEC16YPL085W YLR152CP54072 576 aa2.03□□□□□ -2.08
SEC16YPL085W MRP51Q02950 344 aa2.03□□□□□ -2.08
SEC16YPL085W YMR279CQ03263 540 aa2.03□□□□□ -2.08
SEC16YPL085W NGL2Q03264 515 aaKnown RBP2.03□□□□□ -2.08
SEC16YPL085W YMR111CQ04461 462 aaPredicted RBP2.03□□□□□ -2.08
SEC16YPL085W YLR173WQ06247 608 aa2.03□□□□□ -2.08
SEC16YPL085W BUD20Q08004 166 aaPredicted RBP2.03□□□□□ -2.08
SEC16YPL085W YPR010C-AA5Z2X5 72 aa2.03□□□□□ -2.08
SEC16YPL085W HTB2P02294 131 aa2.03□□□□□ -2.08
SEC16YPL085W YCR102CP25608 368 aa2.03□□□□□ -2.08
SEC16YPL085W VMA5P31412 392 aaKnown RBP2.03□□□□□ -2.08
SEC16YPL085W MRPL17P36528 281 aa2.03□□□□□ -2.08
SEC16YPL085W APT2P36973 181 aa2.03□□□□□ -2.08
SEC16YPL085W AFG3P39925 761 aa2.03□□□□□ -2.08
SEC16YPL085W SMD3P43321 101 aaKnown RBP2.03□□□□□ -2.08
SEC16YPL085W YVH1Q02256 364 aaKnown RBP2.03□□□□□ -2.08
SEC16YPL085W KTI11Q3E840 82 aa2.03□□□□□ -2.08
SEC16YPL085W COX5AP00424 153 aa2.03□□□□□ -2.08
SEC16YPL085W SGA1P08019 549 aa2.03□□□□□ -2.08
SEC16YPL085W TEC1P18412 486 aa2.03□□□□□ -2.08
SEC16YPL085W EXG1P23776 448 aaKnown RBP2.03□□□□□ -2.08
SEC16YPL085W SFP1P32432 683 aa2.03□□□□□ -2.08
SEC16YPL085W PAU24P38155 120 aa2.03□□□□□ -2.08
SEC16YPL085W ARP1P38696 384 aa2.03□□□□□ -2.08
SEC16YPL085W TRS31Q03337 283 aa2.03□□□□□ -2.08
SEC16YPL085W QCR2P07257 368 aa2.03□□□□□ -2.09
SEC16YPL085W CDC12P32468 407 aaKnown RBP2.03□□□□□ -2.09
SEC16YPL085W RML2P32611 393 aa2.03□□□□□ -2.09
SEC16YPL085W AST2P39945 430 aaKnown RBP2.03□□□□□ -2.09
SEC16YPL085W QDR1P40475 563 aa2.03□□□□□ -2.09
SEC16YPL085W CAK1P43568 368 aaPredicted RBP2.03□□□□□ -2.09
SEC16YPL085W LYS5P50113 272 aa2.03□□□□□ -2.09
SEC16YPL085W YIP1P53039 248 aa2.03□□□□□ -2.09
SEC16YPL085W PEX25Q02969 394 aa2.03□□□□□ -2.09
SEC16YPL085W YAP6Q03935 383 aa2.03□□□□□ -2.09
SEC16YPL085W RNH202Q05635 350 aa2.03□□□□□ -2.09
SEC16YPL085W PNP1Q05788 311 aa2.03□□□□□ -2.09
SEC16YPL085W RIF2Q06208 395 aa2.03□□□□□ -2.09
SEC16YPL085W ASA1Q06822 443 aa2.03□□□□□ -2.09
SEC16YPL085W MCH1Q07376 486 aa2.03□□□□□ -2.09
SEC16YPL085W IRC23Q08416 157 aa2.03□□□□□ -2.09
SEC16YPL085W YPR202WQ08993 238 aa2.03□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 52.5 ms