RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C RFC2P40348 353 aa4.84□□□□□ -1.63
RAT1YOR048C TAX4P47030 604 aa4.84□□□□□ -1.63
RAT1YOR048C PHO23P50947 330 aa4.84□□□□□ -1.63
RAT1YOR048C COS10P52924 374 aa4.84□□□□□ -1.63
RAT1YOR048C RSM27P53305 110 aa4.84□□□□□ -1.63
RAT1YOR048C ODC1Q03028 310 aa4.84□□□□□ -1.63
RAT1YOR048C ANT1Q06497 328 aa4.84□□□□□ -1.63
RAT1YOR048C FDH1Q08911 376 aa4.84□□□□□ -1.63
RAT1YOR048C YOR289WQ12012 251 aaPredicted RBP4.84□□□□□ -1.63
RAT1YOR048C YHR213W-AQ8TGT4 77 aa4.84□□□□□ -1.63
RAT1YOR048C REP2P03872 296 aa4.84□□□□□ -1.63
RAT1YOR048C AI1P03875 834 aa4.84□□□□□ -1.63
RAT1YOR048C GAL4P04386 881 aa4.84□□□□□ -1.63
RAT1YOR048C SLY41P22215 453 aa4.84□□□□□ -1.63
RAT1YOR048C CBT1P36038 271 aaPredicted RBP4.84□□□□□ -1.63
RAT1YOR048C NSG1P38837 291 aa4.84□□□□□ -1.63
RAT1YOR048C SKN7P38889 622 aa4.84□□□□□ -1.63
RAT1YOR048C YIR035CP40579 254 aa4.84□□□□□ -1.63
RAT1YOR048C SEN15Q04675 128 aa4.84□□□□□ -1.63
RAT1YOR048C CRR1Q05790 422 aa4.84□□□□□ -1.63
RAT1YOR048C YPR091CQ06833 770 aa4.84□□□□□ -1.63
RAT1YOR048C AIM6Q07716 390 aa4.84□□□□□ -1.63
RAT1YOR048C GRC3Q07845 632 aa4.84□□□□□ -1.63
RAT1YOR048C ACC1Q00955 2233 aaKnown RBP4.84□□□□□ -1.63
RAT1YOR048C YGL041W-AP0C5N3 154 aa4.83□□□□□ -1.64
RAT1YOR048C DAT1P13483 248 aaKnown RBP4.83□□□□□ -1.64
RAT1YOR048C GAS1P22146 559 aaKnown RBP4.83□□□□□ -1.64
RAT1YOR048C ECM25P32525 599 aa4.83□□□□□ -1.64
RAT1YOR048C PPG1P32838 368 aa4.83□□□□□ -1.64
RAT1YOR048C IFA38P38286 347 aa4.83□□□□□ -1.64
RAT1YOR048C RRP3P38712 501 aaKnown RBP4.83□□□□□ -1.64
RAT1YOR048C NAB3P38996 802 aaKnown RBP RIP-Chip data4.83□□□□□ -1.64not detected
RAT1YOR048C YMR144WP40214 342 aaKnown RBP4.83□□□□□ -1.64
RAT1YOR048C SLS1P42900 643 aa4.83□□□□□ -1.64
RAT1YOR048C RPE1P46969 238 aa4.83□□□□□ -1.64
RAT1YOR048C AGE1Q04412 482 aa4.83□□□□□ -1.64
RAT1YOR048C VPS68Q12016 184 aa4.83□□□□□ -1.64
RAT1YOR048C POL2P21951 2222 aaKnown RBP4.83□□□□□ -1.64
RAT1YOR048C RPS14AP06367 137 aaKnown RBP4.83□□□□□ -1.64
RAT1YOR048C RPL20AP0CX23 172 aaKnown RBP4.83□□□□□ -1.64
RAT1YOR048C RPL20BP0CX24 172 aaPredicted RBP4.83□□□□□ -1.64
RAT1YOR048C FUN19P28003 413 aaPredicted RBP4.83□□□□□ -1.64
RAT1YOR048C ITR1P30605 584 aa4.83□□□□□ -1.64
RAT1YOR048C SRB6P32570 121 aa4.83□□□□□ -1.64
RAT1YOR048C YBL010CP32788 280 aa4.83□□□□□ -1.64
RAT1YOR048C TIM12P32830 109 aa4.83□□□□□ -1.64
RAT1YOR048C TEF4P36008 412 aaKnown RBP4.83□□□□□ -1.64
RAT1YOR048C CCZ1P38273 704 aa4.83□□□□□ -1.64
RAT1YOR048C RPP1P38786 293 aa4.83□□□□□ -1.64
RAT1YOR048C RPS14BP39516 138 aaKnown RBP4.83□□□□□ -1.64
RAT1YOR048C PUG1P40100 303 aa4.83□□□□□ -1.64
RAT1YOR048C BLM10P43583 2143 aa4.83□□□□□ -1.64
RAT1YOR048C RMD9P53140 646 aaKnown RBP4.83□□□□□ -1.64
RAT1YOR048C BRX1Q08235 291 aaKnown RBP4.83□□□□□ -1.64
RAT1YOR048C TFC7Q12415 435 aa4.83□□□□□ -1.64
RAT1YOR048C FRE6Q12473 712 aa4.83□□□□□ -1.64
RAT1YOR048C YKL033W-AQ86ZR7 236 aa4.83□□□□□ -1.64
RAT1YOR048C GAL1P04385 528 aa4.83□□□□□ -1.64
RAT1YOR048C MRP1P10662 321 aaKnown RBP4.83□□□□□ -1.64
RAT1YOR048C RPB5P20434 215 aa4.83□□□□□ -1.64
RAT1YOR048C MTC2P34246 357 aa4.83□□□□□ -1.64
RAT1YOR048C COS8P38723 381 aa4.83□□□□□ -1.64
RAT1YOR048C GTF1P53260 183 aaPredicted RBP4.83□□□□□ -1.64
RAT1YOR048C SNO4Q04902 237 aa4.83□□□□□ -1.64
RAT1YOR048C HSP33Q08914 237 aaKnown RBP4.83□□□□□ -1.64
RAT1YOR048C HSP32Q08992 237 aa4.83□□□□□ -1.64
RAT1YOR048C YOL107WQ12239 342 aa4.83□□□□□ -1.64
RAT1YOR048C SFG1Q12507 346 aa4.83□□□□□ -1.64
RAT1YOR048C YPR145C-AQ2V2P0 78 aa4.83□□□□□ -1.64
RAT1YOR048C DFG16Q99234 619 aa4.83□□□□□ -1.64
RAT1YOR048C ELO2P25358 347 aa4.82□□□□□ -1.64
RAT1YOR048C SFA1P32771 386 aa4.82□□□□□ -1.64
RAT1YOR048C DOA1P36037 715 aa4.82□□□□□ -1.64
RAT1YOR048C FMP46P36141 133 aaKnown RBP4.82□□□□□ -1.64
RAT1YOR048C TAT1P38085 619 aa4.82□□□□□ -1.64
RAT1YOR048C RTC3P38804 111 aaPredicted RBP4.82□□□□□ -1.64
RAT1YOR048C FAA3P39002 694 aa4.82□□□□□ -1.64
RAT1YOR048C GLR1P41921 483 aaKnown RBP4.82□□□□□ -1.64
RAT1YOR048C LAP3Q01532 483 aaKnown RBP RIP-Chip data4.82□□□□□ -1.64not detected
RAT1YOR048C AVO1Q08236 1176 aa4.82□□□□□ -1.64
RAT1YOR048C RTC5Q12108 567 aaKnown RBP4.82□□□□□ -1.64
RAT1YOR048C YDL211CQ12121 372 aa4.82□□□□□ -1.64
RAT1YOR048C DGK1Q12382 290 aa4.82□□□□□ -1.64
RAT1YOR048C SKM1Q12469 655 aa4.82□□□□□ -1.64
RAT1YOR048C MSB2P32334 1306 aa4.82□□□□□ -1.64
RAT1YOR048C GCD1P09032 578 aaPredicted RBP4.82□□□□□ -1.64
RAT1YOR048C RPL1AP0CX43 217 aaKnown RBP4.82□□□□□ -1.64
RAT1YOR048C RPL1BP0CX44 217 aaKnown RBP4.82□□□□□ -1.64
RAT1YOR048C PPA2P28239 310 aa4.82□□□□□ -1.64
RAT1YOR048C KRE6P32486 720 aa4.82□□□□□ -1.64
RAT1YOR048C SPT23P35210 1082 aa4.82□□□□□ -1.64
RAT1YOR048C ARO9P38840 513 aaPredicted RBP4.82□□□□□ -1.64
RAT1YOR048C MNL1P38888 796 aa4.82□□□□□ -1.64
RAT1YOR048C ATF1P40353 525 aa4.82□□□□□ -1.64
RAT1YOR048C AIR1P40507 360 aaKnown RBP4.82□□□□□ -1.64
RAT1YOR048C PMT6P42934 759 aa4.82□□□□□ -1.64
RAT1YOR048C YJL016WP47072 561 aa4.82□□□□□ -1.64
RAT1YOR048C YRM1Q12340 786 aa4.82□□□□□ -1.64
RAT1YOR048C SNU23Q12368 194 aaPredicted RBP4.82□□□□□ -1.64
RAT1YOR048C VMA9Q3E7B6 73 aa4.82□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms