RNA–Protein interactions for RNA: YOL142W

RRP40, Transcript of Exosome non-catalytic core component, yeast

Gene RRP40, Length 723 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRP40	YOL142W	PHB2	P50085	310 aa		4.06	□□□□□ -1.76
RRP40	YOL142W	KAP120	Q02932	1032 aa		4.06	□□□□□ -1.76
RRP40	YOL142W	MET31	Q03081	177 aa		4.06	□□□□□ -1.76
RRP40	YOL142W	FDH1	Q08911	376 aa		4.06	□□□□□ -1.76
RRP40	YOL142W	RUP1	Q12242	671 aa		4.06	□□□□□ -1.76
RRP40	YOL142W	RRP36	Q12481	300 aa	Predicted RBP	4.06	□□□□□ -1.76
RRP40	YOL142W	GCN1	P33892	2672 aa	Known RBP	4.05	□□□□□ -1.76
RRP40	YOL142W	YPR096C	O13587	100 aa		4.05	□□□□□ -1.76
RRP40	YOL142W	ATP6	P00854	259 aa		4.05	□□□□□ -1.76
RRP40	YOL142W	SPO7	P18410	259 aa		4.05	□□□□□ -1.76
RRP40	YOL142W	TOA1	P32773	286 aa		4.05	□□□□□ -1.76
RRP40	YOL142W	SUI1	P32911	108 aa	Known RBP	4.05	□□□□□ -1.76
RRP40	YOL142W	TAF14	P35189	244 aa		4.05	□□□□□ -1.76
RRP40	YOL142W	ASC1	P38011	319 aa	Known RBP	4.05	□□□□□ -1.76
RRP40	YOL142W	GDT1	P38301	280 aa	Predicted RBP	4.05	□□□□□ -1.76
RRP40	YOL142W	MNL1	P38888	796 aa		4.05	□□□□□ -1.76
RRP40	YOL142W	FRT2	P39734	528 aa		4.05	□□□□□ -1.76
RRP40	YOL142W	YIL086C	P40503	102 aa		4.05	□□□□□ -1.76
RRP40	YOL142W	YNL140C	P53910	189 aa		4.05	□□□□□ -1.76
RRP40	YOL142W	YPR202W	Q08993	238 aa		4.05	□□□□□ -1.76
RRP40	YOL142W	YPR064W	Q12492	139 aa		4.05	□□□□□ -1.76
RRP40	YOL142W	CUP1-1	P0CX80	61 aa		4.04	□□□□□ -1.76
RRP40	YOL142W	CUP1-2	P0CX81	61 aa		4.04	□□□□□ -1.76
RRP40	YOL142W	TAH1	P25638	111 aa	Predicted RBP	4.04	□□□□□ -1.76
RRP40	YOL142W	SEC17	P32602	292 aa		4.04	□□□□□ -1.76
RRP40	YOL142W	RPT5	P33297	434 aa	Known RBP	4.04	□□□□□ -1.76
RRP40	YOL142W	MRPL17	P36528	281 aa		4.04	□□□□□ -1.76
RRP40	YOL142W	HPM1	P40481	377 aa		4.04	□□□□□ -1.76
RRP40	YOL142W	FMP32	P43557	207 aa		4.04	□□□□□ -1.76
RRP40	YOL142W	RAD17	P48581	401 aa		4.04	□□□□□ -1.76
RRP40	YOL142W	ROG1	P53118	685 aa		4.04	□□□□□ -1.76
RRP40	YOL142W	PRO2	P54885	456 aa	Known RBP	4.04	□□□□□ -1.76
RRP40	YOL142W	SED5	Q01590	340 aa		4.04	□□□□□ -1.76
RRP40	YOL142W	PEX25	Q02969	394 aa		4.04	□□□□□ -1.76
RRP40	YOL142W	YHC1	Q05900	231 aa	Known RBP	4.04	□□□□□ -1.76
RRP40	YOL142W	GGA1	Q06336	557 aa		4.04	□□□□□ -1.76
RRP40	YOL142W	MMT2	Q08970	484 aa		4.04	□□□□□ -1.76
RRP40	YOL142W	RAS2	P01120	322 aa	Known RBP	4.03	□□□□□ -1.76
RRP40	YOL142W	CBP2	P03874	630 aa	Predicted RBP	4.03	□□□□□ -1.76
RRP40	YOL142W	GCD2	P12754	651 aa	Predicted RBP	4.03	□□□□□ -1.76
RRP40	YOL142W	CCA1	P21269	546 aa		4.03	□□□□□ -1.76
RRP40	YOL142W	CHA1	P25379	360 aa	Known RBP	4.03	□□□□□ -1.76
RRP40	YOL142W	POP5	P28005	173 aa		4.03	□□□□□ -1.76
RRP40	YOL142W	VPS21	P36017	210 aa	Known RBP	4.03	□□□□□ -1.76
RRP40	YOL142W	MRPL15	P36523	253 aa		4.03	□□□□□ -1.76
RRP40	YOL142W	IST2	P38250	946 aa		4.03	□□□□□ -1.76
RRP40	YOL142W	STP2	P38704	541 aa		4.03	□□□□□ -1.76
RRP40	YOL142W	PAC11	P40960	533 aa		4.03	□□□□□ -1.76
RRP40	YOL142W	GAB1	P41733	394 aa		4.03	□□□□□ -1.76
RRP40	YOL142W	PMT4	P46971	762 aa		4.03	□□□□□ -1.76
RRP40	YOL142W	HOC1	P47124	396 aa		4.03	□□□□□ -1.76
RRP40	YOL142W	IBA57	P47158	497 aa		4.03	□□□□□ -1.76
RRP40	YOL142W	MIG2	P53035	382 aa		4.03	□□□□□ -1.76
RRP40	YOL142W	YGR266W	P53326	701 aa		4.03	□□□□□ -1.76
RRP40	YOL142W	YMR102C	Q03177	834 aa		4.03	□□□□□ -1.76
RRP40	YOL142W	SPC24	Q04477	213 aa		4.03	□□□□□ -1.76
RRP40	YOL142W	BOP2	Q06150	570 aa		4.03	□□□□□ -1.76
RRP40	YOL142W	GET4	Q12125	312 aa		4.03	□□□□□ -1.76
RRP40	YOL142W	NSL1	Q12143	216 aa		4.03	□□□□□ -1.76
RRP40	YOL142W	WTM1	Q12363	437 aa	Known RBP	4.03	□□□□□ -1.76
RRP40	YOL142W	BCY1	P07278	416 aa	Known RBP	4.02	□□□□□ -1.77
RRP40	YOL142W	RNA1	P11745	407 aa	Known RBP	4.02	□□□□□ -1.77
RRP40	YOL142W	UNG1	P12887	359 aa		4.02	□□□□□ -1.77
RRP40	YOL142W	DAP2	P18962	818 aa		4.02	□□□□□ -1.77
RRP40	YOL142W	URA4	P20051	364 aa		4.02	□□□□□ -1.77
RRP40	YOL142W	MXR2	P25566	168 aa		4.02	□□□□□ -1.77
RRP40	YOL142W	CSM1	P25651	190 aa		4.02	□□□□□ -1.77
RRP40	YOL142W	CAT2	P32796	670 aa	Known RBP	4.02	□□□□□ -1.77
RRP40	YOL142W	RPS27A	P35997	82 aa	Known RBP	4.02	□□□□□ -1.77
RRP40	YOL142W	DOA1	P36037	715 aa		4.02	□□□□□ -1.77
RRP40	YOL142W	RPS27B	P38711	82 aa		4.02	□□□□□ -1.77
RRP40	YOL142W	TRM5	P38793	499 aa		4.02	□□□□□ -1.77
RRP40	YOL142W	JLP2	P40206	208 aa		4.02	□□□□□ -1.77
RRP40	YOL142W	JHD2	P47156	728 aa	Predicted RBP	4.02	□□□□□ -1.77
RRP40	YOL142W	RHO5	P53879	331 aa	Known RBP	4.02	□□□□□ -1.77
RRP40	YOL142W	OAZ1	Q02803	292 aa		4.02	□□□□□ -1.77
RRP40	YOL142W	MMT1	Q03218	510 aa		4.02	□□□□□ -1.77
RRP40	YOL142W	YDR476C	Q03362	224 aa		4.02	□□□□□ -1.77
RRP40	YOL142W	APC4	Q04601	652 aa		4.02	□□□□□ -1.77
RRP40	YOL142W	DYN3	Q04949	312 aa		4.02	□□□□□ -1.77
RRP40	YOL142W	YOL131W	Q08270	108 aa		4.02	□□□□□ -1.77
RRP40	YOL142W	SRL2	Q12020	392 aa		4.02	□□□□□ -1.77
RRP40	YOL142W	RPN5	Q12250	445 aa	Known RBP	4.02	□□□□□ -1.77
RRP40	YOL142W	YRM1	Q12340	786 aa		4.02	□□□□□ -1.77
RRP40	YOL142W	SNF8	Q12483	233 aa		4.02	□□□□□ -1.77
RRP40	YOL142W	STE7	P06784	515 aa		4.01	□□□□□ -1.77
RRP40	YOL142W	MSS116	P15424	664 aa	Known RBP	4.01	□□□□□ -1.77
RRP40	YOL142W	UGA1	P17649	471 aa		4.01	□□□□□ -1.77
RRP40	YOL142W	ZIP1	P31111	875 aa		4.01	□□□□□ -1.77
RRP40	YOL142W	RRP4	P38792	359 aa	Known RBP	4.01	□□□□□ -1.77
RRP40	YOL142W	PRP39	P39682	629 aa	Known RBP	4.01	□□□□□ -1.77
RRP40	YOL142W	RGI1	P40043	161 aa	Predicted RBP	4.01	□□□□□ -1.77
RRP40	YOL142W	YIL001W	P40560	513 aa		4.01	□□□□□ -1.77
RRP40	YOL142W	RPL10	P41805	221 aa	Known RBP	4.01	□□□□□ -1.77
RRP40	YOL142W	YMR010W	Q03687	405 aa		4.01	□□□□□ -1.77
RRP40	YOL142W	YMR130W	Q04223	302 aa		4.01	□□□□□ -1.77
RRP40	YOL142W	YPL225W	Q08971	146 aa	Known RBP	4.01	□□□□□ -1.77
RRP40	YOL142W	STP22	P25604	385 aa		4	□□□□□ -1.77
RRP40	YOL142W	SSO1	P32867	290 aa		4	□□□□□ -1.77
RRP40	YOL142W	FAD1	P38913	306 aa		4	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 308.5 ms