RNA–Protein interactions for RNA: YOL123W

HRP1, Transcript of Subunit of cleavage factor I, yeast

Gene HRP1, Length 1,605 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HRP1	YOL123W	APS3	P47064	194 aa		4.89	□□□□□ -1.63
HRP1	YOL123W	PMT5	P52867	743 aa		4.89	□□□□□ -1.63
HRP1	YOL123W	YNR062C	P53748	327 aa		4.89	□□□□□ -1.63
HRP1	YOL123W	LSM7	P53905	115 aa	Known RBP	4.89	□□□□□ -1.63
HRP1	YOL123W	NUP116	Q02630	1113 aa		4.89	□□□□□ -1.63
HRP1	YOL123W	TPO3	Q06451	622 aa		4.89	□□□□□ -1.63
HRP1	YOL123W	YPR174C	Q06616	221 aa	Predicted RBP	4.89	□□□□□ -1.63
HRP1	YOL123W	YLR030W	Q07967	263 aa		4.89	□□□□□ -1.63
HRP1	YOL123W	YOR352W	Q08816	343 aa		4.89	□□□□□ -1.63
HRP1	YOL123W	YOR283W	Q12040	230 aa	Known RBP	4.89	□□□□□ -1.63
HRP1	YOL123W	PSF1	Q12488	208 aa		4.89	□□□□□ -1.63
HRP1	YOL123W	URA3	P03962	267 aa		4.88	□□□□□ -1.63
HRP1	YOL123W	RPS18A	P0CX55	146 aa	Known RBP	4.88	□□□□□ -1.63
HRP1	YOL123W	RPS18B	P0CX56	146 aa	Predicted RBP	4.88	□□□□□ -1.63
HRP1	YOL123W	PET54	P10834	293 aa		4.88	□□□□□ -1.63
HRP1	YOL123W	STE12	P13574	688 aa		4.88	□□□□□ -1.63
HRP1	YOL123W	GRX2	P17695	143 aa	Known RBP	4.88	□□□□□ -1.63
HRP1	YOL123W	YPK2	P18961	677 aa		4.88	□□□□□ -1.63
HRP1	YOL123W	SAR1	P20606	190 aa	Known RBP	4.88	□□□□□ -1.63
HRP1	YOL123W	MXR2	P25566	168 aa		4.88	□□□□□ -1.63
HRP1	YOL123W	IMG1	P25626	169 aa		4.88	□□□□□ -1.63
HRP1	YOL123W	ERG9	P29704	444 aa		4.88	□□□□□ -1.63
HRP1	YOL123W	PRE2	P30656	287 aa	Known RBP	4.88	□□□□□ -1.63
HRP1	YOL123W	DOA4	P32571	926 aa		4.88	□□□□□ -1.63
HRP1	YOL123W	VPS17	P32913	551 aa		4.88	□□□□□ -1.63
HRP1	YOL123W	RPS27A	P35997	82 aa	Known RBP	4.88	□□□□□ -1.63
HRP1	YOL123W	MAL32	P38158	584 aa		4.88	□□□□□ -1.63
HRP1	YOL123W	YBR242W	P38331	238 aa		4.88	□□□□□ -1.63
HRP1	YOL123W	RPS27B	P38711	82 aa		4.88	□□□□□ -1.63
HRP1	YOL123W	RRP4	P38792	359 aa	Known RBP	4.88	□□□□□ -1.63
HRP1	YOL123W	UTP25	P40498	721 aa	Known RBP	4.88	□□□□□ -1.63
HRP1	YOL123W	RPE1	P46969	238 aa		4.88	□□□□□ -1.63
HRP1	YOL123W	VOA1	P53262	265 aa		4.88	□□□□□ -1.63
HRP1	YOL123W	MAL12	P53341	584 aa		4.88	□□□□□ -1.63
HRP1	YOL123W	PLB2	Q03674	706 aa		4.88	□□□□□ -1.63
HRP1	YOL123W	YMR252C	Q04814	134 aa		4.88	□□□□□ -1.63
HRP1	YOL123W	MFB1	Q04922	465 aa		4.88	□□□□□ -1.63
HRP1	YOL123W	TAZ1	Q06510	381 aa		4.88	□□□□□ -1.63
HRP1	YOL123W	ATG41	Q12048	136 aa		4.88	□□□□□ -1.63
HRP1	YOL123W	TIR4	Q12218	487 aa	Predicted RBP	4.88	□□□□□ -1.63
HRP1	YOL123W	NPC2	Q12408	173 aa		4.88	□□□□□ -1.63
HRP1	YOL123W	HIS3	P06633	220 aa		4.87	□□□□□ -1.63
HRP1	YOL123W	RPL20A	P0CX23	172 aa	Known RBP	4.87	□□□□□ -1.63
HRP1	YOL123W	RPL20B	P0CX24	172 aa	Predicted RBP	4.87	□□□□□ -1.63
HRP1	YOL123W	MRP1	P10662	321 aa	Known RBP	4.87	□□□□□ -1.63
HRP1	YOL123W	GPI12	P23797	304 aa		4.87	□□□□□ -1.63
HRP1	YOL123W	PUT3	P25502	979 aa	Predicted RBP	4.87	□□□□□ -1.63
HRP1	YOL123W	ATG22	P25568	528 aa		4.87	□□□□□ -1.63
HRP1	YOL123W	FUN19	P28003	413 aa	Predicted RBP	4.87	□□□□□ -1.63
HRP1	YOL123W	CWP1	P28319	239 aa		4.87	□□□□□ -1.63
HRP1	YOL123W	PRE4	P30657	266 aa		4.87	□□□□□ -1.63
HRP1	YOL123W	RNP1	P32385	249 aa		4.87	□□□□□ -1.63
HRP1	YOL123W	MTH1	P35198	433 aa		4.87	□□□□□ -1.63
HRP1	YOL123W	YKL071W	P36086	256 aa		4.87	□□□□□ -1.63
HRP1	YOL123W	IFA38	P38286	347 aa		4.87	□□□□□ -1.63
HRP1	YOL123W	MLH1	P38920	769 aa		4.87	□□□□□ -1.63
HRP1	YOL123W	LTP1	P40347	161 aa		4.87	□□□□□ -1.63
HRP1	YOL123W	YPS6	P40583	537 aa		4.87	□□□□□ -1.63
HRP1	YOL123W	PMT6	P42934	759 aa		4.87	□□□□□ -1.63
HRP1	YOL123W	SFH5	P47008	294 aa		4.87	□□□□□ -1.63
HRP1	YOL123W	NCE101	Q02820	53 aa		4.87	□□□□□ -1.63
HRP1	YOL123W	YML053C	Q04978	212 aa		4.87	□□□□□ -1.63
HRP1	YOL123W	COA4	Q05809	96 aa		4.87	□□□□□ -1.63
HRP1	YOL123W	BNA5	Q05979	453 aa		4.87	□□□□□ -1.63
HRP1	YOL123W	CYR1	P08678	2026 aa	Known RBP	4.87	□□□□□ -1.63
HRP1	YOL123W	BEM2	P39960	2167 aa	Known RBP	4.87	□□□□□ -1.63
HRP1	YOL123W	GCN4	P03069	281 aa		4.86	□□□□□ -1.63
HRP1	YOL123W	COX9	P07255	59 aa		4.86	□□□□□ -1.63
HRP1	YOL123W	PEP4	P07267	405 aa	Known RBP	4.86	□□□□□ -1.63
HRP1	YOL123W	BOS1	P25385	244 aa		4.86	□□□□□ -1.63
HRP1	YOL123W	YCR102C	P25608	368 aa		4.86	□□□□□ -1.63
HRP1	YOL123W	DCG1	P32460	244 aa		4.86	□□□□□ -1.63
HRP1	YOL123W	KRE6	P32486	720 aa		4.86	□□□□□ -1.63
HRP1	YOL123W	PAU2	P32612	120 aa		4.86	□□□□□ -1.63
HRP1	YOL123W	MTC7	P32633	139 aa		4.86	□□□□□ -1.63
HRP1	YOL123W	RPP1	P38786	293 aa		4.86	□□□□□ -1.63
HRP1	YOL123W	PTH1	P38876	190 aa	Known RBP	4.86	□□□□□ -1.63
HRP1	YOL123W	PHO90	P39535	881 aa		4.86	□□□□□ -1.63
HRP1	YOL123W	YER010C	P40011	234 aa		4.86	□□□□□ -1.63
HRP1	YOL123W	YIL152W	P40455	235 aa		4.86	□□□□□ -1.63
HRP1	YOL123W	MNN5	P46982	586 aa		4.86	□□□□□ -1.63
HRP1	YOL123W	YJR141W	P47172	347 aa	Predicted RBP	4.86	□□□□□ -1.63
HRP1	YOL123W	DOC1	P53068	250 aa		4.86	□□□□□ -1.63
HRP1	YOL123W	MRPL50	P53724	139 aa		4.86	□□□□□ -1.63
HRP1	YOL123W	ACS1	Q01574	713 aa		4.86	□□□□□ -1.63
HRP1	YOL123W	MRPS16	Q02608	121 aa		4.86	□□□□□ -1.63
HRP1	YOL123W	NRG1	Q03125	231 aa		4.86	□□□□□ -1.63
HRP1	YOL123W	AIM36	Q03798	255 aa		4.86	□□□□□ -1.63
HRP1	YOL123W	DIC1	Q06143	298 aa		4.86	□□□□□ -1.63
HRP1	YOL123W	FMP40	Q08968	688 aa	Predicted RBP	4.86	□□□□□ -1.63
HRP1	YOL123W	YDL109C	Q12103	647 aa		4.86	□□□□□ -1.63
HRP1	YOL123W	SPS2	P08459	502 aa		4.86	□□□□□ -1.63
HRP1	YOL123W	YSF3	P0C074	85 aa	Predicted RBP	4.86	□□□□□ -1.63
HRP1	YOL123W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
HRP1	YOL123W	GPX1	P36014	167 aa		4.86	□□□□□ -1.63
HRP1	YOL123W	MRPL15	P36523	253 aa		4.86	□□□□□ -1.63
HRP1	YOL123W	CHK1	P38147	527 aa		4.86	□□□□□ -1.63
HRP1	YOL123W	HTD2	P38790	280 aa	Known RBP	4.86	□□□□□ -1.63
HRP1	YOL123W	YIL086C	P40503	102 aa		4.86	□□□□□ -1.63
HRP1	YOL123W	POP1	P41812	875 aa		4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 35.2 ms