RNA–Protein interactions for RNA: YOL116W

MSN1, Transcript of Transcriptional activator, yeast

Gene MSN1, Length 1,149 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSN1	YOL116W	YPR064W	Q12492	139 aa		2.62	□□□□□ -1.99
MSN1	YOL116W	MTR10	Q99189	972 aa		2.62	□□□□□ -1.99
MSN1	YOL116W	NFT1	P0CE68	1218 aa		2.61	□□□□□ -1.99
MSN1	YOL116W	SSC1	P0CS90	654 aa	Known RBP	2.61	□□□□□ -1.99
MSN1	YOL116W	RPS8A	P0CX39	200 aa	Known RBP	2.61	□□□□□ -1.99
MSN1	YOL116W	RPS8B	P0CX40	200 aa	Known RBP	2.61	□□□□□ -1.99
MSN1	YOL116W	GPA2	P10823	449 aa		2.61	□□□□□ -1.99
MSN1	YOL116W	GCD2	P12754	651 aa	Predicted RBP	2.61	□□□□□ -1.99
MSN1	YOL116W	RSR1	P13856	272 aa		2.61	□□□□□ -1.99
MSN1	YOL116W	TAH1	P25638	111 aa	Predicted RBP	2.61	□□□□□ -1.99
MSN1	YOL116W	ADE1	P27616	306 aa		2.61	□□□□□ -1.99
MSN1	YOL116W	FAA1	P30624	700 aa	Known RBP	2.61	□□□□□ -1.99
MSN1	YOL116W	SUI1	P32911	108 aa	Known RBP	2.61	□□□□□ -1.99
MSN1	YOL116W	RPC37	P36121	282 aa		2.61	□□□□□ -1.99
MSN1	YOL116W	ETR1	P38071	380 aa		2.61	□□□□□ -1.99
MSN1	YOL116W	ADH5	P38113	351 aa	Known RBP	2.61	□□□□□ -1.99
MSN1	YOL116W	OLA1	P38219	394 aa	Known RBP	2.61	□□□□□ -1.99
MSN1	YOL116W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	2.61	□□□□□ -1.99	not detected
MSN1	YOL116W	NAS2	P40555	220 aa		2.61	□□□□□ -1.99
MSN1	YOL116W	FMP32	P43557	207 aa		2.61	□□□□□ -1.99
MSN1	YOL116W	PMT4	P46971	762 aa		2.61	□□□□□ -1.99
MSN1	YOL116W	EFM5	P53200	248 aa	Known RBP	2.61	□□□□□ -1.99
MSN1	YOL116W	EOS1	P53938	366 aa		2.61	□□□□□ -1.99
MSN1	YOL116W	TIM11	P81449	96 aa	Predicted RBP	2.61	□□□□□ -1.99
MSN1	YOL116W	BCH1	Q05029	724 aa		2.61	□□□□□ -1.99
MSN1	YOL116W	YLR177W	Q06251	628 aa		2.61	□□□□□ -1.99
MSN1	YOL116W	PML1	Q07930	204 aa	Predicted RBP	2.61	□□□□□ -1.99
MSN1	YOL116W	YOR376W	Q08900	122 aa		2.61	□□□□□ -1.99
MSN1	YOL116W	FDH1	Q08911	376 aa		2.61	□□□□□ -1.99
MSN1	YOL116W	YPL247C	Q12523	523 aa		2.61	□□□□□ -1.99
MSN1	YOL116W	STE3	P06783	470 aa		2.6	□□□□□ -1.99
MSN1	YOL116W	DST1	P07273	309 aa		2.6	□□□□□ -1.99
MSN1	YOL116W	RPC40	P07703	335 aa	Known RBP	2.6	□□□□□ -1.99
MSN1	YOL116W	GRR1	P24814	1151 aa		2.6	□□□□□ -1.99
MSN1	YOL116W	SOR1	P35497	357 aa	Known RBP	2.6	□□□□□ -1.99
MSN1	YOL116W	VPS21	P36017	210 aa	Known RBP	2.6	□□□□□ -1.99
MSN1	YOL116W	ASC1	P38011	319 aa	Known RBP	2.6	□□□□□ -1.99
MSN1	YOL116W	ZTA1	P38230	334 aa	Known RBP	2.6	□□□□□ -1.99
MSN1	YOL116W	PHO89	P38361	574 aa		2.6	□□□□□ -1.99
MSN1	YOL116W	MMS21	P38632	267 aa		2.6	□□□□□ -1.99
MSN1	YOL116W	GPI16	P38875	610 aa		2.6	□□□□□ -1.99
MSN1	YOL116W	GGC1	P38988	300 aa		2.6	□□□□□ -1.99
MSN1	YOL116W	PCL7	P40186	285 aa		2.6	□□□□□ -1.99
MSN1	YOL116W	PEP8	P40335	379 aa		2.6	□□□□□ -1.99
MSN1	YOL116W	HOC1	P47124	396 aa		2.6	□□□□□ -1.99
MSN1	YOL116W	AIF1	P52923	378 aa		2.6	□□□□□ -1.99
MSN1	YOL116W	BIO4	P53630	237 aa		2.6	□□□□□ -1.99
MSN1	YOL116W	YNR068C	P53754	272 aa		2.6	□□□□□ -1.99
MSN1	YOL116W	RHO5	P53879	331 aa	Known RBP	2.6	□□□□□ -1.99
MSN1	YOL116W	OCA2	P53949	197 aa		2.6	□□□□□ -1.99
MSN1	YOL116W	HAL1	Q01766	294 aa		2.6	□□□□□ -1.99
MSN1	YOL116W	RMI1	Q02685	241 aa		2.6	□□□□□ -1.99
MSN1	YOL116W	GIP3	Q03016	1276 aa		2.6	□□□□□ -1.99
MSN1	YOL116W	SEC10	Q06245	871 aa		2.6	□□□□□ -1.99
MSN1	YOL116W	NDE2	Q07500	545 aa		2.6	□□□□□ -1.99
MSN1	YOL116W	SOR2	Q07786	357 aa		2.6	□□□□□ -1.99
MSN1	YOL116W	SLF1	Q12034	447 aa	Known RBP	2.6	□□□□□ -1.99
MSN1	YOL116W	YRA1	Q12159	226 aa	Known RBP	2.6	□□□□□ -1.99
MSN1	YOL116W	YOR342C	Q12182	319 aa		2.6	□□□□□ -1.99
MSN1	YOL116W	PSY3	Q12318	242 aa		2.6	□□□□□ -1.99
MSN1	YOL116W	SKS1	Q12505	502 aa		2.6	□□□□□ -1.99
MSN1	YOL116W	RGS2	Q99188	309 aa		2.6	□□□□□ -1.99
MSN1	YOL116W	SOD1	P00445	154 aa	Known RBP	2.59	□□□□□ -1.99
MSN1	YOL116W	ARO3	P14843	370 aa	Known RBP	2.59	□□□□□ -1.99
MSN1	YOL116W	DAP2	P18962	818 aa		2.59	□□□□□ -1.99
MSN1	YOL116W	GPI12	P23797	304 aa		2.59	□□□□□ -1.99
MSN1	YOL116W	CTR86	P25355	563 aa		2.59	□□□□□ -1.99
MSN1	YOL116W	GCG1	P32656	232 aa	Known RBP	2.59	□□□□□ -1.99
MSN1	YOL116W	PPQ1	P32945	549 aa		2.59	□□□□□ -1.99
MSN1	YOL116W	RIB7	P33312	244 aa		2.59	□□□□□ -1.99
MSN1	YOL116W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	2.59	□□□□□ -1.99	not detected
MSN1	YOL116W	YBR137W	P38276	179 aa		2.59	□□□□□ -1.99
MSN1	YOL116W	YDR089W	P38966	869 aa		2.59	□□□□□ -1.99
MSN1	YOL116W	RTT105	P40063	208 aa		2.59	□□□□□ -1.99
MSN1	YOL116W	YJR141W	P47172	347 aa	Predicted RBP	2.59	□□□□□ -1.99
MSN1	YOL116W	YNL140C	P53910	189 aa		2.59	□□□□□ -1.99
MSN1	YOL116W	MTQ1	P53944	314 aa		2.59	□□□□□ -1.99
MSN1	YOL116W	LSM3	P57743	89 aa	Known RBP	2.59	□□□□□ -1.99
MSN1	YOL116W	SPP2	Q02521	185 aa		2.59	□□□□□ -1.99
MSN1	YOL116W	YDR209C	Q03480	137 aa		2.59	□□□□□ -1.99
MSN1	YOL116W	MGR3	Q04472	501 aa		2.59	□□□□□ -1.99
MSN1	YOL116W	RRP42	Q12277	265 aa	Predicted RBP	2.59	□□□□□ -1.99
MSN1	YOL116W	SEC16	P48415	2195 aa	Known RBP	2.59	□□□□□ -2
MSN1	YOL116W	YSF3	P0C074	85 aa	Predicted RBP	2.58	□□□□□ -2
MSN1	YOL116W	COS2	P0CX12	379 aa		2.58	□□□□□ -2
MSN1	YOL116W	COS3	P0CX13	379 aa		2.58	□□□□□ -2
MSN1	YOL116W	YCR090C	P25654	182 aa	Known RBP	2.58	□□□□□ -2
MSN1	YOL116W	RIM1	P32445	135 aa	Known RBP	2.58	□□□□□ -2
MSN1	YOL116W	PHA2	P32452	334 aa		2.58	□□□□□ -2
MSN1	YOL116W	BMT2	P38278	337 aa		2.58	□□□□□ -2
MSN1	YOL116W	ATG7	P38862	630 aa		2.58	□□□□□ -2
MSN1	YOL116W	FAD1	P38913	306 aa		2.58	□□□□□ -2
MSN1	YOL116W	YER034W	P40022	185 aa	Known RBP	2.58	□□□□□ -2
MSN1	YOL116W	COS4	P43542	379 aa		2.58	□□□□□ -2
MSN1	YOL116W	ECO1	P43605	281 aa		2.58	□□□□□ -2
MSN1	YOL116W	MKC7	P53379	596 aa		2.58	□□□□□ -2
MSN1	YOL116W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	2.58	□□□□□ -2	not detected
MSN1	YOL116W	MIX14	Q04341	121 aa		2.58	□□□□□ -2
MSN1	YOL116W	YMR111C	Q04461	462 aa	Predicted RBP	2.58	□□□□□ -2
MSN1	YOL116W	NDL1	Q06568	189 aa		2.58	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms